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Aliases for BICRA-AS1 Gene

Subcategory (RNA class) for BICRA-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BICRA-AS1 Gene

  • BICRA Antisense RNA 1 2 3 5
  • GLTSCR1 Antisense RNA 1 2 3
  • GLTSCR1-AS1 3

External Ids for BICRA-AS1 Gene

Previous HGNC Symbols for BICRA-AS1 Gene

  • GLTSCR1-AS1

Summaries for BICRA-AS1 Gene

GeneCards Summary for BICRA-AS1 Gene

BICRA-AS1 (BICRA Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BICRA-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BICRA-AS1 Gene

Genomics for BICRA-AS1 Gene

Regulatory Elements for BICRA-AS1 Gene

Enhancers for BICRA-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H047623 1.1 ENCODE dbSUPER 0.7 +2.3 2288 1 DRAP1 PKNOX1 ZFP64 ZMYM3 DMAP1 ZNF384 ZIC2 ZNF644 TEAD3 ZFHX2 BICRA-AS1 ENSG00000277383
GH19H047607 1.6 Ensembl ENCODE dbSUPER 0.4 +15.3 15309 6 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF143 ZNF207 FOS ENSG00000269321 ZNF541 BSPH1 TPRX2P ELSPBP1 LOC105372430 ZC3H4 MEIS3 TPRX1 PRKD2
GH19H047627 0.7 ENCODE dbSUPER 0.7 -2.1 -2055 1 ZNF664 ZNF121 ZNF524 BICRA-AS1 ENSG00000278999
GH19H047647 1.6 Ensembl ENCODE dbSUPER 0.3 -22.2 -22205 2 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZBTB7B YY1 FOS SP3 GRWD1 ENSG00000278999 BICRA-AS1
GH19H047657 1.5 Ensembl ENCODE dbSUPER 0.3 -36.9 -36869 10 PKNOX1 FOXA2 ATF1 MLX ARNT SIN3A BRCA1 YY1 ZNF121 ELK1 BICRA NOP53 ZC3H4 CCDC9 ZNF541 SNORD23 SULT2A1 GRWD1 ENSG00000278999 BICRA-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BICRA-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BICRA-AS1 Gene

Chromosome:
19
Start:
47,615,699 bp from pter
End:
47,626,395 bp from pter
Size:
10,697 bases
Orientation:
Minus strand

Genomic View for BICRA-AS1 Gene

Genes around BICRA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BICRA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BICRA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for BICRA-AS1 Gene

Proteins for BICRA-AS1 Gene

Post-translational modifications for BICRA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BICRA-AS1 Gene

Domains & Families for BICRA-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BICRA-AS1 Gene

Function for BICRA-AS1 Gene

Phenotypes From GWAS Catalog for BICRA-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BICRA-AS1 Gene

Localization for BICRA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BICRA-AS1 Gene

Pathways & Interactions for BICRA-AS1 Gene

SuperPathways for BICRA-AS1 Gene

No Data Available

Interacting Proteins for BICRA-AS1 Gene

Gene Ontology (GO) - Biological Process for BICRA-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BICRA-AS1 Gene

Drugs & Compounds for BICRA-AS1 Gene

No Compound Related Data Available

Transcripts for BICRA-AS1 Gene

mRNA/cDNA for BICRA-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BICRA-AS1 Gene

No ASD Table

Relevant External Links for BICRA-AS1 Gene

GeneLoc Exon Structure for
BICRA-AS1
ECgene alternative splicing isoforms for
BICRA-AS1

Expression for BICRA-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BICRA-AS1 Gene

Orthologs for BICRA-AS1 Gene

Evolution for BICRA-AS1 Gene

ENSEMBL:
Gene Tree for BICRA-AS1 (if available)
TreeFam:
Gene Tree for BICRA-AS1 (if available)

No data available for Orthologs for BICRA-AS1 Gene

Paralogs for BICRA-AS1 Gene

No data available for Paralogs for BICRA-AS1 Gene

Variants for BICRA-AS1 Gene

Relevant External Links for BICRA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BICRA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BICRA-AS1 Gene

Disorders for BICRA-AS1 Gene

No disorders were found for BICRA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BICRA-AS1 Gene

Publications for BICRA-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for BICRA-AS1 Gene

Sources for BICRA-AS1 Gene

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