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Aliases & Descriptions for CEACAM1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BGP 2 , 3 , 5 BGP-1 3 BGP1 1 , 2 , 3 BGPI 2 CD66a 1
Descriptions Biliary glycoprotein 1 3 CD66a antigen 2 , 3 antigen CD66 2 biliary glycoprotein adhesion molecule 2 carcinoembryonic antigen-related cell adhesion molecule 1 2 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 2
Search outside databases for aliases for CEACAM1 genePrevious GC identifers: GC19M043658 GC19M043403 GC19M047687
Summaries for CEACAM1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for CEACAM1 : This gene encodes a member of the carcinoembryonic antigen (CEA) gene family, which belongs to theimmunoglobulin superfamily. Two subgroups of the CEA family, the CEA cell adhesion molecules andthe pregnancy-specific glycoproteins, are located within a 1.2 Mb cluster on the long arm ofchromosome 19. Eleven pseudogenes of the CEA cell adhesion molecule subgroup are also found in thecluster. The encoded protein was originally described in bile ducts of liver as biliaryglycoprotein. Subsequently, it was found to be a cell-cell adhesion molecule detected onleukocytes, epithelia, and endothelia. The encoded protein mediates cell adhesion via homophilicas well as heterophilic binding to other proteins of the subgroup. Multiple cellular activitieshave been attributed to the encoded protein, including roles in the differentiation andarrangement of tissue three-dimensional structure, angiogenesis, apoptosis, tumor suppression,metastasis, and the modulation of innate and adaptive immune responses. Multiple transcriptvariants encoding different isoforms have been reported, but the full-length nature of only twohas been determined. [provided by RefSeq] Gene Wiki entry for CEACAM1
Genomic Location for CEACAM1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the CEACAM1 gene Entrez Gene cytogenetic band: 19q13.2 Ensembl cytogenetic band: 19q13.2 HGNC cytogenetic band: 19q13.2 CEACAM1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19M047703:
(about GC identifiers )
Start:
47,701,340 bp from pter
End:
47,724,479 bp from pter
Size:
23,140 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000019.8 NT_011109.15 Proteins for CEACAM1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: CEAM1_HUMAN, P13688 (See
protein sequence )Recommended Name: Carcinoembryonic antigen-related cell adhesion molecule 1 precursor Size : 526 amino acids; 57560 Da
Subcellular location : Isoform A: Cell membrane; Single-pass type I membrane protein
Subcellular location : Isoform B: Cell membrane; Single-pass type I membrane protein
Subcellular location : Isoform C: Cell membrane; Single-pass type I membrane protein
Subcellular location : Isoform G: Secreted
Subcellular location : Isoform H: Secreted
Subcellular location : Isoform I: Secreted
PDB structures from and Proteopedia : 2GK2 (3D)
 
Secondary accessions : A6NE38 O60430 Q13858 Q15600 Q9UQV9Alternative splicing : 7 isoforms : P13688-1 P13688-2 P13688-3 P13688-4 P13688-5 P13688-6 P13688-7
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001020083.1 NP_001703.2 ENSEMBL proteins: ENSP00000374317 ENSP00000325946 ENSP00000244291 ENSP00000351165 ENSP00000161559 ENSP00000312184 ENSP00000367304 ENSP00000341688 ENSP00000384709 ENSP00000384083 ENSP00000367037 ENSP00000381600 ENSP00000384843 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for CEACAM1: Assays for CEACAM1:
Protein
Domains/ Families for CEACAM1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P13688 ProtoNet protein and cluster: P13688
2 Blocks protein families : IPB003598 Immunoglobulin C-2 type IPB013106 Immunoglobulin V-set UniProtKB/Swiss-Prot: CEAM1_HUMAN, P13688 Similarity : Belongs to the immunoglobulin superfamily. CEA familySimilarity : Contains 3 Ig-like C2-type (immunoglobulin-like) domainsSimilarity : Contains 1 Ig-like V-type (immunoglobulin-like) domain
Gene Function for CEACAM1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001024912 Applied Biosystems Silencer ® siRNAs for CEACAM1 Sigma-Aldrich siRNA and siRNA Panels for CEACAM1 Sigma-Aldrich shRNA Panels and shRNA for CEACAM1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001712 Genatlas biochemistry entry for CEACAM1 :carcinoembryonic antigen-related cell adhesion molecule 1,biliary glycoprotein (see CEA@)
5 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Ceacam1) :1 Gene Ontology (GO) molecular function term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0003674 molecular_function
ND --
About this table
Pathways & Interactions for CEACAM1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for CEACAM1 5/23 Interacting proteins for CEACAM1 (ENSP00000367304 3 P13688 2 ) via UniProtKB, MINT, and/or STRING (see all 23
)About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for CEACAM1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for CEACAM1 10/12 Novoseek chemical compound relationships for CEACAM1 gene (see all 12
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
matrigel
47.60
14
19285068 (3), 10564638 (3), 15339048 (2), 14522961 (1) (see all 6 )
glycogen
29.17
11
12378338 (1), 10638593 (1), 11384100 (1), 9583890 (1) (see all 7 )
sialic acid
28.75
1
11322763 (1)
phosphatidylinositol
21.09
8
17071610 (3), 12571236 (2)
tyrosine
17.84
14
15004154 (2), 17761831 (2), 9867848 (1), 18453603 (1) (see all 8 )
glucose
2.56
1
17393985 (1)
phenylalanine
0.00
1
11278391 (1)
oligonucleotide
0.00
1
8631584 (1)
lipid
0.00
4
15339048 (2), 18081725 (1)
steroid
0.00
2
9506857 (1), 11964043 (1)
About this table
Transcripts for CEACAM1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001024912 Sigma-Aldrich siRNA and siRNA Panels for CEACAM1 Sigma-Aldrich shRNA Panels and shRNA for CEACAM1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001024912 NM_001712
REFSEQ mRNAs for CEACAM1 gene (2 alternative transcripts): NM_001024912.1 NM_001712.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001024912 NM_001712
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001024912  
Additional cDNA sequence: AK314211.1 AL833584.1 AY766113.1 BC014473.1 BC024164.1 CR608576.1 D12502.1 D90311.1 D90312.1 D90313.1 J03858.1 M69176.1 M72238.1 M76742.1 M76743.1 M76744.1 S71326.1 S74647.1 X14831.1 X16354.1 X16356.1
21 DOTS entries : DT.95146984 DT.100658676 DT.92439258 DT.91978573 DT.121424607 DT.91781689 DT.92439264 DT.100822614 DT.121424012 DT.65286356 DT.95293755 DT.40114371 DT.92420006 DT.100822610 DT.86848472 DT.100712890 DT.121424282 DT.121424528 DT.75132501 DT.91714653 DT.95147024
24/202 AceView cDNA sequences (see all 202
):AA700605 BX396085 AA593076 AI690507 CD612616 X16356 AW450228 M76744 AW951862 CB161535 AW027805 BI031918 AI291145 AI738994 BM759588 AI285093 AW611749 BI031917 AA337247 BE048590 J03858 AI346459 BU195866 D12097
highest scoring ESTs for CEACAM1 :S71326 X16354 AL709036 AL710589 AL833584 AU099898 BC014473 BC024164 BF904069 BG398599
Unigene Cluster for CEACAM1: Carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) Hs.512682 [show with all ESTs ] Unigene Representative Sequence: NM_001712 GeneLoc Exon Structure 13 Ensembl transcripts including schematic representations : ENST00000389666
ENST00000351134
ENST00000352591
ENST00000358394
ENST00000161559
ENST00000308072
ENST00000378065
ENST00000344391
ENST00000403444
ENST00000403461
ENST00000377806
ENST00000398599
ENST00000403136
Expression for CEACAM1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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CEACAM1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for CEACAM1 1 / 2 / 3
12 probe-sets matching CEACAM1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.512682 Expression variation in blood from EXPOLDB for CEACAM1
Orthologs for CEACAM1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for CEACAM1 gene from 2 species
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
mouse (Mus musculus)
Ceacam15
7 (5.50 cM)
carcinoembryonic antigen-related cell adhesion molecule more
--
X84054
zebrafish (Danio rerio)
ceacam11
--
carcinoembryonic antigen-related cell adhesion molecule more
44.97(n) 34.59(a)
114465 NM_001113794.1 NP_001107266.1
About this table Species with no ortholog for CEACAM1 ENSEMBL Gene Tree for CEACAM1 Paralogs for CEACAM1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for CEACAM1 gene CEACAM6 1 2 CEACAM5 1 2 PSG5 2 PSG9 2 PSG8 2 PSG6 2 PSG11 2 CEACAM8 2 CEACAM7 2 PSG3 2 PSG2 2 PSG7 2 PSG1 2
SNPs/Variants for CEACAM1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for CEACAM1 (up to first 250kb)
Disorders & Mutations for CEACAM1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 109770 UniProtKB/Swiss-Prot: CEAM1_HUMAN, P13688
Loss or reduced expression is a major event in colorectal carcinogenesis Increased serum levels of BGP-1 are found in individuals suffering from hepatic disorders
10/48 Novoseek disease relationships for CEACAM1 gene (see all 48
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
endometrial neoplasia
55.14
1
16633066 (1)
colon carcinoma
48.92
2
1815506 (1), 9028835 (1)
carcinoma
46.47
63
12469186 (7), 11480789 (4), 11384100 (3), 16332726 (3) (see all 20 )
colon tumor
46.31
4
18927117 (1), 11278391 (1), 18507857 (1), 8402684 (1)
gastrointestinal carcinoma
43.46
1
8188529 (1)
tumors
43.07
113
17057731 (8), 12122002 (5), 15568039 (5), 15952183 (5) (see all 50 )
colorectal carcinoma
42.15
13
10638593 (5), 10374690 (2), 7504281 (1), 17057731 (1) (see all 6 )
colon cancer
36.26
11
9858884 (2), 15568039 (2), 9028835 (1), 18278069 (1) (see all 6 )
adenoma
36.08
12
10638593 (2), 10374690 (2), 15476270 (2), 9858884 (1) (see all 7 )
endometrial carcinoma
32.26
7
16332726 (3), 16633066 (2), 7690349 (1)
About this table Genetic Association Database: CEACAM1 Human Genome Epidemiology Navigator: CEACAM1 (2 documents)
Medical News for CEACAM1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for CEACAM1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/233 PubMed articles for CEACAM1 gene (see all 233
): Three novel molecular forms of biliary glycoprotein deduced from cDNA clones from a human leukocyte library. (PubMed id 2025273) 2, 3, 4 Kuroki M....Matsuoka Y. (1991) Molecular cloning of a cDNA coding biliary glycoprotein I: primary structure of a glycoprotein immunologically crossreactive with carcinoembryonic antigen. (PubMed id 2457922) 2, 3, 4 Hinoda Y.... Paxton R.J. (1988) Characterization and transcriptional activity of the mouse biliary glycoprotein 1 gene, a carcinoembryonic antigen-related gene. (PubMed id 7628460) 1, 3, 4 Nedellec P.... Beauchemin N. (1995) Transcriptional control of the human biliary glycoprotein gene, a CEA gene family member down-regulated in colorectal carcinomas. (PubMed id 8055923) 1, 3, 4 Hauck W....Beauchemin N. (1994) Structure of the N-terminal domain of human CEACAM1: binding target of the opacity proteins during invasion of Neisseria meningitidis and N. gonorrhoeae. (PubMed id 16929097) 1, 3, 4 Fedarovich A....Davies C. (2006) Human biliary glycoprotein gene: characterization of a family of novel alternatively spliced RNAs and their expressed proteins. (PubMed id 8423792) 1, 3, 4 Barnett T.R.... Pickle W. II (1993) Bone mineral density and five prominent candidate genes in Chinese men: associations, interaction effects and their implications. (PubMed id 15917161) 3, 6 Lei S.F....Deng H.W. (2005) Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. (PubMed id 16335952) 3, 4 Liu T.... Smith R.D. (2005) The DNA sequence and biology of human chromosome 19. (PubMed id 15057824) 3, 4 Grimwood J.... Lucas S.M. (2004) Carcinoembryonic antigens: alternative splicing accounts for the multiple mRNAs that code for novel members of the carcinoembryonic antigen family. (PubMed id 2537311) 3, 4 Barnett T.R.... Kamarck M.E. (1989)
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Genome Databases showing CEACAM1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing CEACAM1
(According to HUGE )
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--
Specialized Databases showing CEACAM1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for CEACAM1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for CEACAM1:
Search Tocris compounds for CEACAM1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009