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Aliases for BEND5 Gene

Aliases for BEND5 Gene

  • BEN Domain Containing 5 2 3
  • C1orf165 3 4
  • Chromosome 1 Open Reading Frame 165 2
  • BEN Domain-Containing Protein 5 3

External Ids for BEND5 Gene

Previous Symbols for BEND5 Gene

  • C1orf165

Summaries for BEND5 Gene

GeneCards Summary for BEND5 Gene

BEND5 (BEN Domain Containing 5) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BEND5 Gene

Genomics for BEND5 Gene

Genomic Location for BEND5 Gene

Start:
48,727,523 bp from pter
End:
48,776,969 bp from pter
Size:
49,447 bases
Orientation:
Minus strand

Genomic View for BEND5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BEND5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BEND5 Gene

Regulatory Elements for BEND5 Gene

Proteins for BEND5 Gene

  • Protein details for BEND5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7L4P6-BEND5_HUMAN
    Recommended name:
    BEN domain-containing protein 5
    Protein Accession:
    Q7L4P6
    Secondary Accessions:
    • D3DQ27
    • Q96A62
    • Q9HAI3

    Protein attributes for BEND5 Gene

    Size:
    421 amino acids
    Molecular mass:
    48182 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH11804.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for BEND5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BEND5 Gene

Proteomics data for BEND5 Gene at MOPED

Post-translational modifications for BEND5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BEND5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BEND5 Gene

Domains for BEND5 Gene

Gene Families for BEND5 Gene

HGNC:
  • BEND :BEN domain containing

Protein Domains for BEND5 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for BEND5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q7L4P6

UniProtKB/Swiss-Prot:

BEND5_HUMAN
Domain:
  • Contains 1 BEN domain.:
    • Q7L4P6
genes like me logo Genes that share domains with BEND5: view

Function for BEND5 Gene

Gene Ontology (GO) - Molecular Function for BEND5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with BEND5: view

Phenotypes for BEND5 Gene

GenomeRNAi human phenotypes for BEND5:
genes like me logo Genes that share phenotypes with BEND5: view

miRNA for BEND5 Gene

miRTarBase miRNAs that target BEND5

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for BEND5 Gene

Localization for BEND5 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BEND5 Gene COMPARTMENTS Subcellular localization image for BEND5 gene
Compartment Confidence
cytosol 2
golgi apparatus 2
nucleus 2

Gene Ontology (GO) - Cellular Components for BEND5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005794 Golgi apparatus IEA --
genes like me logo Genes that share ontologies with BEND5: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for BEND5 Gene

Pathways for BEND5 Gene

SuperPathways for BEND5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BEND5 Gene

None

No data available for Pathways by source for BEND5 Gene

Transcripts for BEND5 Gene

Unigene Clusters for BEND5 Gene

BEN domain containing 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BEND5 Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b · 3c ^ 4 ^ 5
SP1: -
SP2: - -
SP3:
SP4: - -

Relevant External Links for BEND5 Gene

GeneLoc Exon Structure for
BEND5
ECgene alternative splicing isoforms for
BEND5

Expression for BEND5 Gene

mRNA expression in normal human tissues for BEND5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for BEND5 Gene

SOURCE GeneReport for Unigene cluster for BEND5 Gene Hs.475348

genes like me logo Genes that share expressions with BEND5: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for BEND5 Gene

Orthologs for BEND5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for BEND5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BEND5 35
  • 99.84 (n)
  • 100 (a)
BEND5 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BEND5 35
  • 95.72 (n)
  • 98.1 (a)
BEND5 36
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BEND5 35
  • 93.92 (n)
  • 97.72 (a)
BEND5 36
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Bend5 35
  • 94.46 (n)
  • 98.57 (a)
Bend5 16
Bend5 36
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia BEND5 36
  • 73 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Bend5 35
  • 93.9 (n)
  • 97.62 (a)
chicken
(Gallus gallus)
Aves BEND5 35
  • 81.29 (n)
  • 87.23 (a)
BEND5 36
  • 86 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia BEND5 36
  • 81 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia bend5 35
  • 71.56 (n)
  • 76.28 (a)
zebrafish
(Danio rerio)
Actinopterygii bend5 35
  • 64.52 (n)
  • 66.07 (a)
bend5 36
  • 61 (a)
OneToOne
Species with no ortholog for BEND5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BEND5 Gene

ENSEMBL:
Gene Tree for BEND5 (if available)
TreeFam:
Gene Tree for BEND5 (if available)

Paralogs for BEND5 Gene

No data available for Paralogs for BEND5 Gene

Variants for BEND5 Gene

Structural Variations from Database of Genomic Variants (DGV) for BEND5 Gene

Variant ID Type Subtype PubMed ID
nsv871053 CNV Gain 21882294
nsv829771 CNV Gain 17160897

Relevant External Links for BEND5 Gene

HapMap Linkage Disequilibrium report
BEND5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for BEND5 Gene

Disorders for BEND5 Gene

No disorders were found for BEND5 Gene.

No data available for UniProtKB/Swiss-Prot for BEND5 Gene

Publications for BEND5 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3
  5. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3

Products for BEND5 Gene

Sources for BEND5 Gene

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