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Aliases for BEND3P3 Gene

Subcategory (RNA class) for BEND3P3 Gene

lncRNA

Aliases for BEND3P3 Gene

  • BEN Domain Containing 3 Pseudogene 3 2 3 5

External Ids for BEND3P3 Gene

ORGUL Members for BEND3P3 Gene

Previous GeneCards Identifiers for BEND3P3 Gene

  • GC10P081443
  • GC10P081555
  • GC10P080038
  • GC10P080063

Summaries for BEND3P3 Gene

GeneCards Summary for BEND3P3 Gene

BEND3P3 (BEN Domain Containing 3 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BEND3P3 Gene

Genomics for BEND3P3 Gene

Regulatory Elements for BEND3P3 Gene

Enhancers for BEND3P3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around BEND3P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for BEND3P3 Gene

Chromosome:
10
Start:
79,682,975 bp from pter
End:
79,688,897 bp from pter
Size:
5,923 bases
Orientation:
Plus strand

Genomic View for BEND3P3 Gene

Genes around BEND3P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BEND3P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BEND3P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BEND3P3 Gene

Proteins for BEND3P3 Gene

Post-translational modifications for BEND3P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BEND3P3 Gene

Domains & Families for BEND3P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BEND3P3 Gene

Function for BEND3P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BEND3P3 Gene

Localization for BEND3P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BEND3P3 Gene

Pathways & Interactions for BEND3P3 Gene

SuperPathways for BEND3P3 Gene

No Data Available

Interacting Proteins for BEND3P3 Gene

Gene Ontology (GO) - Biological Process for BEND3P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BEND3P3 Gene

Drugs & Compounds for BEND3P3 Gene

No Compound Related Data Available

Transcripts for BEND3P3 Gene

mRNA/cDNA for BEND3P3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BEND3P3 Gene

BEN domain containing 3 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BEND3P3 Gene

No ASD Table

Relevant External Links for BEND3P3 Gene

GeneLoc Exon Structure for
BEND3P3
ECgene alternative splicing isoforms for
BEND3P3

Expression for BEND3P3 Gene

mRNA expression in normal human tissues for BEND3P3 Gene

SOURCE GeneReport for Unigene cluster for BEND3P3 Gene Hs.730022

genes like me logo Genes that share expression patterns with BEND3P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for BEND3P3 Gene

Orthologs for BEND3P3 Gene

Evolution for BEND3P3 Gene

ENSEMBL:
Gene Tree for BEND3P3 (if available)
TreeFam:
Gene Tree for BEND3P3 (if available)

No data available for Orthologs for BEND3P3 Gene

Paralogs for BEND3P3 Gene

No data available for Paralogs for BEND3P3 Gene

Variants for BEND3P3 Gene

Sequence variations from dbSNP and Humsavar for BEND3P3 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs3012936 -- 79,681,207(+) aaaaa(C/T)GAAAG upstream-variant-2KB
rs3012937 -- 79,681,336(+) tcaat(C/T)tcaaa upstream-variant-2KB
rs3012938 -- 79,684,130(+) ACAGG(C/T)GAGTT nc-transcript-variant
rs3012939 -- 79,685,525(+) ATGTC(C/T)GTGGG nc-transcript-variant
rs3012941 -- 79,688,474(+) GAGGG(A/G)GGATC nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for BEND3P3 Gene

Disorders for BEND3P3 Gene

Relevant External Links for BEND3P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BEND3P3

No disorders were found for BEND3P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BEND3P3 Gene

Publications for BEND3P3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for BEND3P3 Gene

Sources for BEND3P3 Gene

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