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Aliases for BCRP3 Gene

Aliases for BCRP3 Gene

  • Breakpoint Cluster Region Pseudogene 3 2 3
  • Breakpoint Cluster Region-Like 6 2 3
  • Breakpoint Cluster Region-Like 3 2 3
  • BCRL3 3 6
  • BCRL6 3
  • BCR3 3

External Ids for BCRP3 Gene

Previous HGNC Symbols for BCRP3 Gene

  • BCR3
  • BCRL6
  • BCRL3

Previous GeneCards Identifiers for BCRP3 Gene

  • GC22P025030

Summaries for BCRP3 Gene

GeneCards Summary for BCRP3 Gene

BCRP3 (Breakpoint Cluster Region Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCRP3 Gene

Genomics for BCRP3 Gene

Genomic Location for BCRP3 Gene

Start:
24,632,915 bp from pter
End:
24,653,360 bp from pter
Size:
20,446 bases
Orientation:
Plus strand

Genomic View for BCRP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BCRP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCRP3 Gene

No data available for Regulatory Elements for BCRP3 Gene

Proteins for BCRP3 Gene

Post-translational modifications for BCRP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCRP3 Gene

Domains for BCRP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BCRP3 Gene

Function for BCRP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BCRP3 Gene

Localization for BCRP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BCRP3 Gene

Pathways for BCRP3 Gene

SuperPathways for BCRP3 Gene

No Data Available

Interacting Proteins for BCRP3 Gene

Gene Ontology (GO) - Biological Process for BCRP3 Gene

None

No data available for Pathways by source for BCRP3 Gene

Transcripts for BCRP3 Gene

mRNA/cDNA for BCRP3 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BCRP3 Gene

Breakpoint cluster region pseudogene 3:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BCRP3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for BCRP3 Gene

No ASD Table

Relevant External Links for BCRP3 Gene

GeneLoc Exon Structure for
BCRP3
ECgene alternative splicing isoforms for
BCRP3

Expression for BCRP3 Gene

mRNA expression in normal human tissues for BCRP3 Gene

mRNA differential expression in normal tissues according to GTEx for BCRP3 Gene

This gene is overexpressed in Kidney - Cortex (13.0) and Brain - Cerebellum (4.2).

SOURCE GeneReport for Unigene cluster for BCRP3 Gene Hs.655234

genes like me logo Genes that share expressions with BCRP3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for BCRP3 Gene

Orthologs for BCRP3 Gene

Evolution for BCRP3 Gene

ENSEMBL:
Gene Tree for BCRP3 (if available)
TreeFam:
Gene Tree for BCRP3 (if available)

No data available for Orthologs for BCRP3 Gene

Paralogs for BCRP3 Gene

No data available for Paralogs for BCRP3 Gene

Variants for BCRP3 Gene

Sequence variations from dbSNP and Humsavar for BCRP3 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs2330888 -- 24,636,922(+) TTCCT(A/C)AATAA intron-variant
rs2330889 -- 24,636,946(+) tataa(C/T)ctatt intron-variant
rs3865539 -- 24,636,571(+) tgccc(C/T)gttgt intron-variant
rs3865743 -- 24,635,450(-) ATGAC(A/G)CTGTA intron-variant
rs3865744 -- 24,635,554(+) CCCCT(C/T)TGTGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BCRP3 Gene

Variant ID Type Subtype PubMed ID
nsv7350 OTHER Inversion 18451855
esv2724041 CNV Deletion 23290073
esv2724068 CNV Deletion 23290073
nsv9884 CNV Gain+Loss 18304495
esv25356 CNV Gain 19812545
esv2530395 CNV Loss 19546169
esv2659398 CNV Deletion 23128226

Relevant External Links for BCRP3 Gene

HapMap Linkage Disequilibrium report
BCRP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BCRP3 Gene

Disorders for BCRP3 Gene

No disorders were found for BCRP3 Gene.

No data available for UniProtKB/Swiss-Prot for BCRP3 Gene

Publications for BCRP3 Gene

  1. Linear order of the four BCR-related loci in 22q11. (PMID: 3267213) Budarf M. … Emanuel B.S. (Genomics 1988) 2 3
  2. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris. (PMID: 24927181) Navarini A.A. … Barker J.N. (Nat Commun 2014) 3

Products for BCRP3 Gene

Sources for BCRP3 Gene

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