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BCR Gene

protein-coding   GIFtS: 74

GC22P021822
breakpoint cluster region
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbols: D22S11, BCR1)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
ALL 1, 2, 5
BCR1 2, 3
CML 1, 2, 5
D22S11 2, 3
D22S662 1, 2
EC 2.7.11.1 3
FLJ16453 2
PHL 1, 2, 5
Descriptions
Renal carcinoma antigen NY-REN-26 3
breakpoint cluster region 2
External Ids
HGNC: 10141
Entrez Gene: 6132
UniProtKB: P112743
Ensembl: ENSG000001867167
Search outside databases for aliases for BCR gene

Previous GC identifers: GC22P020221 GC22P021847

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for BCR:
A reciprocal translocation between chromosomes 22 and 9 produces the Philadelphia chromosome, which
is often found in patients with chronic myelogenous leukemia. The chromosome 22 breakpoint for
this translocation is located within the BCR gene. The translocation produces a fusion protein
which is encoded by sequence from both BCR and ABL, the gene at the chromosome 9 breakpoint.
Although the BCR-ABL fusion protein has been extensively studied, the function of the normal BCR
gene product is not clear. The protein has serine/threonine kinase activity and is a
GTPase-activating protein for p21rac. Two transcript variants encoding different isoforms have
been found for this gene. [provided by RefSeq]

UniProtKB/Swiss-Prot: BCR_HUMAN, P11274
Function: GTPase-activating protein for RAC1 and CDC42. Promotes the exchange of RAC or CDC42-bound
GDP by GTP, thereby activating them. Displays serine/threonine kinase activity

Gene Wiki entry for BCR (BCR_gene)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the BCR gene  

Entrez Gene cytogenetic band: 22q11|22q11.23   Ensembl cytogenetic band:  22q11.23   HGNC cytogenetic band: 22q11

BCR Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22P021822:     (about GC identifiers)

Start:
21,852,552 bp from pter
End:
21,990,224 bp from pter
Size:
137,673 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000022.9  NT_011520.11  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: BCR_HUMAN, P11274 (See protein sequence)
Recommended Name: Breakpoint cluster region protein  
Size: 1271 amino acids; 142819 Da
Subunit: Homotetramer. Interacts with PDZK1. May interact with CCPG1 (By similarity)
PDB structure from and Proteopedia :
1K1F (3D)    2AIN (3D)    
Secondary accessions: P78501 Q12842 Q4LE80 Q6NZI3
Alternative splicing: 2 isoforms:  P11274-1   P11274-2   

Post-translational modifications:

  • Autophosphorylated1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_004318.3  NP_067585.2  


    ENSEMBL proteins: 
    ENSP00000335450 ENSP00000381524 ENSP00000292697 ENSP00000290956 ENSP00000352535 ENSP00000303507 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Bcr)
    Human Recombinant Proteins from Abnova (BCR)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    1 Gene Ontology (GO) cellular component term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622 intracellular IEA--
    About this table

    Antibodies for BCR: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse Antibodies at Sigma-Aldrich
    R&D Systems Antibodies for BCR
    Cell Signaling Technology (CST) Antibodies for BCR 
    Antibodies from Abcam (Bcr), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (BCR)
    Novus Biologicals Antibodies for BCR

    Assays for BCR: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/7 InterPro domains/families (see all 7 ):
     IPR001331 GDS_CDC24_CS
     IPR015123 Bcr-Abl_oncoprot_oligo
     IPR000219 DH-domain
     IPR001849 Pleckstrin_homology
     IPR018029 C2_membr_targeting


       GeneDecks  BCR for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P11274

    ProtoNet protein and cluster: P11274

    4 Blocks protein families:
    IPB000008 C2 domain
    IPB000198 RhoGAP domain
    IPB000219 DH domain
    IPB001849 Pleckstrin-like


    UniProtKB/Swiss-Prot: BCR_HUMAN, P11274
    Domain: The region involved in binding to ABL1 SH2-domain is rich in serine residues and needs to
    be Ser/Thr phosphorylated prior to SH2 binding. This region is essential for the activation of the
    ABL1 tyrosine kinase and transforming potential of the chimeric BCR-ABL oncogene
    Domain: The DH domain is involved in interaction with CCPG1 (By similarity)
    Similarity: Contains 1 C2 domain
    Similarity: Contains 1 DH (DBL-homology) domain
    Similarity: Contains 1 PH domain
    Similarity: Contains 1 Rho-GAP domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BCR)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BCR)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_021574

                  Applied Biosystems Silencer® siRNAs for BCR

                  Sigma-Aldrich siRNA and siRNA Panels for BCR  
                         Sigma-Aldrich shRNA Panels and shRNA for BCR  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_004327
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_004327
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_004327 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_004327

    UniProtKB/Swiss-Prot: BCR_HUMAN, P11274
    Function: GTPase-activating protein for RAC1 and CDC42. Promotes the exchange of RAC or CDC42-bound
    GDP by GTP, thereby activating them. Displays serine/threonine kinase activity
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme Number (IUBMB): EC 2.7.11.1 

    Genatlas biochemistry entry for BCR:
    breakpoint cluster region

    11 MGI mutant phenotypes (inferred from 1 allele(MGI details for Bcr):

    behavior/neurologicaldigestive/alimentarygrowth/sizehearing/vestibular/earhematopoietic system
    homeostasis/metabolismimmune systemlethality-prenatal/perinatalliver/biliary systemnervous system
    renal/urinary system

    5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004674 protein serine/threonine kinase activity TAS1657398
    GO:0005085 guanyl-nucleotide exchange factor activity IEA--
    GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA--
    GO:0005096 GTPase activator activity TAS1903516
    GO:0016301 kinase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    3 Invitrogen iPath™ Online BioAtlas - Pathways for BCR (Maps provided by GeneGo):
     H-RAS regulation pathway
     Regulation of CDC42 activity
     Regulation of RAC1 activity

       GeneDecks  BCR for the pathways selected above  
    About GeneDecksing

    5/6 Millipore Pathways for BCR (see all 6 )
     G-protein signaling Regulation of CDC42 activity
     G-protein signaling Rac2 regulation pathway
     G-protein signaling M-RAS regulation pathway
     G-protein signaling TC21 regulation pathway
     G-protein signaling H-RAS regulation pathway

       GeneDecks  BCR for the pathways selected above  
    About GeneDecksing

    2 Cell Signaling Technology (CST) Pathways for BCR: 
     NF-kB Signaling
     Akt/PKB Signaling

       GeneDecks  BCR for the pathways selected above  
    About GeneDecksing

    2 Kegg Pathways  (Kegg details for BCR):
     hsa05200 Pathways in cancer
     hsa05220 Chronic myeloid leukemia

       GeneDecks  BCR for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  BCR 


    5/132 Interacting proteins for BCR (ENSP000003035073 P112742) via UniProtKB, MINT, and/or STRING (see all 132 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    APBA3O960182STRING (score=.71) MINT-69545 MINT-69538 MINT-69541 MINT-69543 MINT-69544
    CFTRP135692STRING (score=.793) MINT-69537
    MLLT4P551962STRING (score=.897) MINT-4961172
    PDZK1Q5T2W12MINT-69532 MINT-69529 MINT-69530 MINT-69531 MINT-69533
    PTPN1P180312MINT-6762657 MINT-6762620
    About this table

    3 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468 protein amino acid phosphorylation TAS1657398
    GO:0007242 intracellular signaling cascade IEA--
    GO:0035023 regulation of Rho protein signal transduction IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for BCR
    10/33 Novoseek chemical compound relationships for BCR gene (see all 33 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 80.55 412 8955135 (6), 10405761 (6), 9178913 (6), 7529874 (5) (see all 99)
    blys 65.42 9 17548587 (2), 14962189 (2), 12956429 (2), 18978795 (1) (see all 5)
    phosphatidylinositol 50.48 19 11823472 (2), 14555967 (1), 8805618 (1), 11345196 (1) (see all 14)
    phosphotyrosine 44.28 15 10442632 (4), 1712671 (2), 8912843 (1), 11809685 (1) (see all 7)
    inositol 1,4,5 trisphosphate 39.19 7 9565626 (2), 10327049 (1), 14558886 (1), 15284241 (1) (see all 6)
    phosphoinositide 36.23 8 9139721 (1), 12077122 (1), 12524457 (1), 9252119 (1) (see all 8)
    bgl ii 36.13 2 8632666 (1), 11672777 (1)
    threonine 35.43 26 9467953 (3), 8622703 (3), 10900006 (2), 16648854 (1) (see all 14)
    calcium 30.76 79 18426802 (4), 9533441 (3), 10196207 (3), 9565626 (2) (see all 46)
    benzoyl-coa 29.15 2 16116275 (1), 15721605 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BCR)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BCR)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_021574

                  Sigma-Aldrich siRNA and siRNA Panels for BCR  
                         Sigma-Aldrich shRNA Panels and shRNA for BCR  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_004327  NM_021574  

    REFSEQ mRNAs for BCR gene (2 alternative transcripts): 

    NM_004327.3   NM_021574.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_004327  NM_021574  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_004327
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_004327
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_004327 

    Additional cDNA sequence: BC071742.1 

    24/36 DOTS entries (see all 36 ):

    DT.115766  DT.100826988  DT.86995909  DT.100826985  DT.102841720  DT.120677584  DT.95184998  DT.95354641 
    DT.102841710  DT.120677784  DT.120676864  DT.100826990  DT.97836027  DT.92006114  DT.106787  DT.120677442 
    DT.100038569  DT.121201744  DT.91732517  DT.91761972  DT.91761973  DT.92031691  DT.95086271  DT.100826986 

    24/127 AceView cDNA sequences (see all 127 ):

    BE315159 BF873836 BC031568 BE739832 H55528 BM910362 BX489609 BQ709937 
    AA371833 BQ422888 BU196996 CR623143 BM454840 CB144645 H55545 BQ691951 
    H55543 AY536250 H55699 AY536248 BE272823 F06286 BQ441890 AK124310 

    highest scoring ESTs for BCR:

    R54450 X02596 AA126020 AA284789 AA419342 AA594249 AA594310 AA633478 AA776955 AI015232 

    Unigene Clusters for BCR:

    Breakpoint cluster region
    Hs.517461  [show with all ESTs], Hs.715409  [show with all ESTs]
    Unigene Representative Sequences: NM_004327, BC071742


    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for BCR (see all 6 )

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14 ^ 15 ^ 16
    SP1:                                                                                      -                                       
    SP2:              -     -                                                                                                         
    SP3:                                                              -                       -                                       
    SP4:                                                                                                                              
    SP5:        -           -                                                                                                         

    About this scheme

    ECgene alternative splicing isoforms for BCR

    6 Ensembl transcripts including schematic representations:
    ENST00000334149  ENST00000398512  ENST00000292697  ENST00000290956  ENST00000359540  ENST00000305877  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    BCR expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for BCR

    1 / 2 / 3

    17 probe-sets matching BCR gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    1339_s_at2, 3 U95-A 1 1.00 1.00 -0.26 0.76 X14675 0.40 1.00 0.76 1

    2043_s_at2, 3 U95-A 2 1.00 0.81 0.05 0.58 M15025 0.20 1.00 0.72 1

    34679_at2, 3 U95-A 4 1.00 0.67 0.68 1.15 U07000 0.20 0.50 0.38 1

    74612_s_at2, 3 U95-D 4 1.00 0.62 0.94 1.44 R54450 1.00 1.00 1.00 1

    91641_g_at2, 3 U95-E 2 1.00 0.53 0.63 1.07 H09896 0.80 0.57 0.69 1
    1333_f_at2, 3 U95-A 11 1.00 0.43 0.91 0.77 X02596 1.00 0.87 0.94 1
    537_f_at2, 3 U95-A 11 1.00 0.38 0.93 0.76 U07000 0.20 0.50 0.38 1

    68350_s_at2, 3 U95-D 7 1.00 0.37 0.78 1.38 AI589365 0.40 0.75 0.60 1
    754_s_at2, 3 U95-A 4 1.00 0.29 0.89 0.84 D87002 0.20 0.04 0.14 1
    91639_at2, 3 U95-E 5 1.00 0.28 0.91 1.05 H09896 0.80 0.57 0.69 1

    64904_at2, 3 U95-C 6 0.50 0.17 0.88 1.24 AL041418 0.20 0.06 0.15 3

    202315_s_at2, 3 U133-A 4 1.00 0.56 -- -- NM_004327 0.60 1.00 0.82 1

    226602_s_at2, 3 U133-B 6 1.00 0.18 -- -- T30183 0.60 0.83 0.73 1

    217223_s_at2, 3 U133-A 11 1.00 0.17 -- -- U07000 0.20 0.50 0.38 1

    202315_s_at2 U133Plus2 4 1.00 0.56 -- -- -- -- -- -- --

    226602_s_at2 U133Plus2 6 1.00 0.18 -- -- -- -- -- -- --

    217223_s_at2 U133Plus2 11 1.00 0.17 -- -- -- -- -- -- --
    GeneDecks  BCR for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene clusters: Hs.517461 Hs.715409

    Expression variation in blood from EXPOLDB for BCR

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for BCR gene from 5/7 species (see all 7 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    BCR1   -- breakpoint cluster region 90.94(n)
    94.39(a)
    607482  XM_843561.1  XP_848654.1 
    rat
    (Rattus norvegicus)
    Bcr1   -- breakpoint cluster region 88.59(n)
    93.99(a)
    309696  XM_228091.4  XP_228091.4 
    mouse
    (Mus musculus)
    Bcr1, 5 10 (40.50 cM)5
    breakpoint cluster region1, 5 89.35(n)1
    94.16(a)1
    1102791  NM_001081412.11  NP_001074881.11 
     AI5617835  AI8531485  (see all 16)
    chicken
    (Gallus gallus)
    BCR1   -- breakpoint cluster region 77.87(n)
    87.18(a)
    416952  XM_415244.2  XP_415244.2 
    zebrafish
    (Danio rerio)
    si:dkey-83d9.71   -- si:dkey-83d9.7 71.96(n)
    78.5(a)
    568320  XM_691643.2  XP_696735.2 
    About this table        Species with no ortholog for BCR

    ENSEMBL Gene Tree for BCR
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for BCR gene
    SYDE22  LOC7284682  BCRL42  FLJ429532  ABR2  SYDE12  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/974 NCBI SNPs in BCR are shown (see all 974 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 321)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 22 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs37614181,2
    A,C,F,H21851094(+) CTGGAA/GATCTG 2 -- ng516Minor allele frequency- G:0.37EA EU WA 1316
    rs1405041,2
    A,C,F,H21957369(+) CAAGAG/ATGACA 2 S/N mis117Minor allele frequency- A:0.39MN EU EA WA NA 2974
    rs44370651,2
    C,H21933648(+) CCACAA/CGGAGT 2 K/T mis1 ese35Minor allele frequency- C:0.00EU EA WA 582
    --
    rs115586991,2
    H21957275(+) GCTTCC/TAGATG 2 Q/X non1 ese34Minor allele frequency- T:0.00EU EA WA 402
    --
    rs60035401,2
    A21851698(+) TTGGCC/GGCCCC 2 -- ng510--------
    --
    rs124847311,2
    C21957238(+) TATGAA/CTGCAA 2 D/E mis1 ese30--------
    --
    rs1808231,2
    A21989270(+) TGGCAA/CCCGCT 2 -- ut310--------
    --
    rs22290381,2
    O21964790(+) CGCGCG/ATCTAC 2 I/V mis11Minor allele frequency- A:0.02MN 56
    rs344372691,2
    F21853969(+) CCCCTG/AGAGTA 2 L/L syn11Minor allele frequency- A:0.03NA 72
    rs357273931,2
    F21957256(+) ATTCCG/ACTCAC 2 P/P syn11Minor allele frequency- A:0.04NA 46
    About this table

    HapMap Linkage Disequilibrium images for BCR (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 151410

    UniProtKB/Swiss-Prot: BCR_HUMAN, P11274

  • A chromosomal aberration involving BCR is a cause of chronic myeloid leukemia (CML)
    [MIM:608232]. Translocation t(9;22)(q34;q11) with ABL1. The translocation produces a BCR-ABL found
    also in acute myeloid leukemia (AML) and acute lymphoblastic leukemia (ALL)
  • 10/61 Novoseek disease relationships for BCR gene (see all 61 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    myeloid leukemia chronic 91.54 154 12011769 (2), 2403827 (2), 7512367 (2), 2337672 (2) (see all 99)
    blast crisis 81.88 12 7683349 (3), 2337672 (3), 1961034 (1), 1427440 (1) (see all 8)
    leukemia 75.49 118 8435337 (4), 9341866 (3), 7513545 (2), 1961034 (2) (see all 90)
    philadelphia chromosome positive chronic myelogenous leukemia 71.45 1 17604501 (1)
    lymphoblastic leukemia acute 69.59 25 2145450 (2), 1705008 (1), 8426467 (1), 11369654 (1) (see all 22)
    myeloproliferative disorders 67.12 8 8818385 (2), 19394693 (1), 11746971 (1), 10490629 (1) (see all 5)
    leukemia lymphocytic chronic 65.92 12 17928528 (1), 17003377 (1), 9369427 (1), 15057307 (1) (see all 12)
    lymphocytic leukemia chronic b-cell 60.65 5 16616061 (1), 9049959 (1), 19074730 (1), 15591116 (1) (see all 5)
    burkitt lymphoma 60.23 12 10438726 (2), 11027651 (2), 9233773 (1), 9533441 (1) (see all 10)
    x-linked agammaglobulinemia 56.76 2 15466623 (1), 10201980 (1)
    About this table

    Human Gene Mutation Database: BCR
    Genetic Association Database: BCR
    Human Genome Epidemiology Navigator: BCR (144 documents)
    Tumor Gene Database: BCR

    (Possibly Related Articles in Doctor's Guide)
    About This Section

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/848 PubMed articles for BCR gene (see all 848 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 613 HGNC: 1014 AceView: BCR Ensembl:ENSG00000186716 euGenes: HUgn613
    ECgene: BCR H-InvDB: BCR
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for BCR Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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