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Aliases for BCL7B Gene

Aliases for BCL7B Gene

  • B-Cell CLL/Lymphoma 7B 2 3
  • Allergen Hom S 3 4

External Ids for BCL7B Gene

Previous GeneCards Identifiers for BCL7B Gene

  • GC07M071591
  • GC07M072348
  • GC07M072362
  • GC07M072395
  • GC07M072588
  • GC07M072950
  • GC07M068832

Summaries for BCL7B Gene

Entrez Gene Summary for BCL7B Gene

  • This gene encodes a member of the BCL7 family including BCL7A, BCL7B and BCL7C proteins. This member is BCL7B, which contains a region that is highly similar to the N-terminal segment of BCL7A or BCL7C proteins. The BCL7A protein is encoded by the gene known to be directly involved in a three-way gene translocation in a Burkitt lymphoma cell line. This gene is located at a chromosomal region commonly deleted in Williams syndrome. This gene is highly conserved from C. elegans to human. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2010]

GeneCards Summary for BCL7B Gene

BCL7B (B-Cell CLL/Lymphoma 7B) is a Protein Coding gene. Diseases associated with BCL7B include burkitt lymphoma. GO annotations related to this gene include actin binding. An important paralog of this gene is BCL7A.

UniProtKB/Swiss-Prot for BCL7B Gene

  • May play a role in lung tumor development or progression

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCL7B Gene

Genomics for BCL7B Gene

Regulatory Elements for BCL7B Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for BCL7B Gene

Start:
73,536,353 bp from pter
End:
73,558,002 bp from pter
Size:
21,650 bases
Orientation:
Minus strand

Genomic View for BCL7B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BCL7B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCL7B Gene

Proteins for BCL7B Gene

  • Protein details for BCL7B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BQE9-BCL7B_HUMAN
    Recommended name:
    B-cell CLL/lymphoma 7 protein family member B
    Protein Accession:
    Q9BQE9
    Secondary Accessions:
    • A8K226
    • C9JWD3
    • D3DXF0
    • O43769
    • Q13845
    • Q6ZW75

    Protein attributes for BCL7B Gene

    Size:
    202 amino acids
    Molecular mass:
    22195 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for BCL7B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BCL7B Gene

Proteomics data for BCL7B Gene at MOPED

Post-translational modifications for BCL7B Gene

  • Ubiquitination at Lys27
  • Modification sites at PhosphoSitePlus

Other Protein References for BCL7B Gene

No data available for DME Specific Peptides for BCL7B Gene

Domains for BCL7B Gene

Protein Domains for BCL7B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for BCL7B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BQE9

UniProtKB/Swiss-Prot:

BCL7B_HUMAN :
  • Q9BQE9
Family:
  • Belongs to the BCL7 family.
genes like me logo Genes that share domains with BCL7B: view

No data available for Gene Families for BCL7B Gene

Function for BCL7B Gene

Molecular function for BCL7B Gene

GENATLAS Biochemistry: putative F-actin cross linking protein 12 homolog,BCL7A family,involved in cellular and developmental functions,highly expressed in heart,skeletal muscle and fetal liver,located in the commonly Williams region,atopy-related IgE autoantigen,detected in the serum of patients with severe atopic dermatitis,not rearranged in lymphoid malignancies
UniProtKB/Swiss-Prot Function: May play a role in lung tumor development or progression

Gene Ontology (GO) - Molecular Function for BCL7B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003779 actin binding NAS 8605326
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with BCL7B: view

Phenotypes for BCL7B Gene

genes like me logo Genes that share phenotypes with BCL7B: view

Animal Model Products

CRISPR Products

miRNA for BCL7B Gene

miRTarBase miRNAs that target BCL7B

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BCL7B

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for BCL7B Gene

Localization for BCL7B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BCL7B Gene COMPARTMENTS Subcellular localization image for BCL7B gene
Compartment Confidence
mitochondrion 3
nucleus 3
cytosol 1

Gene Ontology (GO) - Cellular Components for BCL7B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with BCL7B: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for BCL7B Gene

Pathways for BCL7B Gene

SuperPathways for BCL7B Gene

No Data Available

Interacting Proteins for BCL7B Gene

Selected Interacting proteins: Q9BQE9-BCL7B_HUMAN for BCL7B Gene via UniProtKB

Symbol External ID(s) Details
MAGEA6

Gene Ontology (GO) - Biological Process for BCL7B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with BCL7B: view

No data available for Pathways by source for BCL7B Gene

Transcripts for BCL7B Gene

Unigene Clusters for BCL7B Gene

B-cell CLL/lymphoma 7B:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BCL7B

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for BCL7B Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b · 8c · 8d · 8e · 8f · 8g · 8h · 8i
SP1: - - - - -
SP2: - - - - - -
SP3: - - -
SP4: - - - - - - -
SP5: - - - - - - - -
SP6: - - - - -
SP7: - - - -
SP8: - -
SP9: - - -
SP10: -

Relevant External Links for BCL7B Gene

GeneLoc Exon Structure for
BCL7B
ECgene alternative splicing isoforms for
BCL7B

Expression for BCL7B Gene

mRNA expression in normal human tissues for BCL7B Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for BCL7B Gene

SOURCE GeneReport for Unigene cluster for BCL7B Gene Hs.647051

mRNA Expression by UniProt/SwissProt for BCL7B Gene

Q9BQE9-BCL7B_HUMAN
Tissue specificity: Ubiquitous.
genes like me logo Genes that share expressions with BCL7B: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for BCL7B Gene

Orthologs for BCL7B Gene

This gene was present in the common ancestor of animals.

Orthologs for BCL7B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BCL7B 35
  • 99.83 (n)
  • 99.5 (a)
BCL7B 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BCL7B 35
  • 93.07 (n)
  • 97.03 (a)
BCL7B 36
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BCL7B 35
  • 94.88 (n)
  • 98.51 (a)
BCL7B 36
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Bcl7b 35
  • 88.45 (n)
  • 96.04 (a)
Bcl7b 16
Bcl7b 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia BCL7B 36
  • 84 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia BCL7B 36
  • 68 (a)
OneToOne
chicken
(Gallus gallus)
Aves BCL7B 35
  • 78.88 (n)
  • 90.1 (a)
BCL7B 36
  • 84 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia BCL7B 36
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia bcl7b 35
  • 69.1 (n)
  • 74.16 (a)
zebrafish
(Danio rerio)
Actinopterygii bcl7ba 35
  • 65.64 (n)
  • 68.21 (a)
bcl7ba 36
  • 66 (a)
OneToMany
bcl7bb 36
  • 63 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta BCL7-like 36
  • 36 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C28H8.1 36
  • 32 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 37 (a)
OneToMany
Species with no ortholog for BCL7B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for BCL7B Gene

ENSEMBL:
Gene Tree for BCL7B (if available)
TreeFam:
Gene Tree for BCL7B (if available)

Paralogs for BCL7B Gene

Paralogs for BCL7B Gene

Selected SIMAP similar genes for BCL7B Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with BCL7B: view

Variants for BCL7B Gene

Sequence variations from dbSNP and Humsavar for BCL7B Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1045200 -- 73,536,396(-) TTAGC(A/C/T)CTGAA utr-variant-3-prime, nc-transcript-variant
rs2057996 -- 73,539,285(-) aacag(A/G)gtgag intron-variant
rs2057997 -- 73,538,953(-) TAAAT(C/T)GCTTG intron-variant
rs2237278 -- 73,536,874(-) TTTCC(C/T)CTAGG utr-variant-3-prime, nc-transcript-variant
rs3216224 -- 73,553,673(-) ttttt(-/T)gagac intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BCL7B Gene

Variant ID Type Subtype PubMed ID
dgv7325n71 CNV Loss 21882294
nsv888369 CNV Loss 21882294
nsv831028 CNV Loss 17160897

Relevant External Links for BCL7B Gene

HapMap Linkage Disequilibrium report
BCL7B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BCL7B Gene

Disorders for BCL7B Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for BCL7B Gene including...

Search for BCL7B Gene in MalaCards »

UniProtKB/Swiss-Prot

BCL7B_HUMAN
  • Note=BCL7B is located in the Williams-Beuren syndrome (WBS) critical region. WBS results from a hemizygous deletion of several genes on chromosome 7q11.23, thought to arise as a consequence of unequal crossing over between highly homologous low-copy repeat sequences flanking the deleted region. Haploinsufficiency of BCL7B may be the cause of certain cardiovascular and musculo-skeletal abnormalities observed in the disease. {ECO:0000269 PubMed:9860302, ECO:0000269 PubMed:9931421}.

(1) University of Copenhagen DISEASES for BCL7B Gene

Relevant External Links for BCL7B

Genetic Association Database (GAD)
BCL7B
Human Genome Epidemiology (HuGE) Navigator
BCL7B
genes like me logo Genes that share disorders with BCL7B: view

Publications for BCL7B Gene

  1. The BCL7 gene family: deletion of BCL7B in Williams syndrome. (PMID: 9931421) Jadayel D.M. … Dyer M.J.S. (Gene 1998) 3 4 23
  2. Molecular cloning of complex chromosomal translocation t(8;14;12)(q24.1;q32.3;q24.1) in a Burkitt lymphoma cell line defines a new gene (BCL7A) with homology to caldesmon. (PMID: 8605326) Zani V.J. … Dyer M.J.S. (Blood 1996) 2 3 4
  3. Isolation of cDNA clones coding for IgE autoantigens with serum IgE from atopic dermatitis patients. (PMID: 9806765) Natter S. … Valenta R. (FASEB J. 1998) 2 3 4
  4. Complete physical map of the common deletion region in Williams syndrome and identification and characterization of three novel genes. (PMID: 9860302) Meng X. … Keating M.T. (Hum. Genet. 1998) 3 4
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4

Products for BCL7B Gene

Sources for BCL7B Gene

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