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BCL2L1 Gene

protein-coding   GIFtS: 69

GC20M029715
BCL2-like 1
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
BCL-XL/S 2
BCL2L 1, 2, 3
BCLX 1, 2, 3
Bcl-X 1, 2
Bcl2-L-1 3
DKFZp781P2092 2
OTTHUMP00000030550 2
OTTHUMP00000030551 2
OTTHUMP00000030553 2
bcl-xL 1, 2
bcl-xS 1, 2
Descriptions
Apoptosis regulator Bcl-X 3
BCL2-like 1 2
External Ids
HGNC: 9921
Entrez Gene: 5982
UniProtKB: Q078173
Ensembl: ENSG000001715527
Search outside databases for aliases for BCL2L1 gene

Previous GC identifers: GC20M030040 GC20M030950 GC20M030997

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for BCL2L1:
The protein encoded by this gene belongs to the BCL-2 protein family. BCL-2 family members form
hetero- or homodimers and act as anti- or pro-apoptotic regulators that are involved in a wide
variety of cellular activities. The proteins encoded by this gene are located at the outer
mitochondrial membrane, and have been shown to regulate outer mitochondrial membrane channel
(VDAC) opening. VDAC regulates mitochondrial membrane potential, and thus controls the production
of reactive oxygen species and release of cytochrome C by mitochondria, both of which are the
potent inducers of cell apoptosis. Two alternatively spliced transcript variants, which encode
distinct isoforms, have been reported. The longer isoform acts as an apoptotic inhibitor and the
shorter form acts as an apoptotic activator. [provided by RefSeq]

UniProtKB/Swiss-Prot: B2CL1_HUMAN, Q07817
Function: Potent inhibitor of cell death. Isoform Bcl-X(L) anti-apoptotic activity is inhibited by
association with SIVA isoform 1. Inhibits activation of caspases (By similarity). Appears to
regulate cell death by blocking the voltage-dependent anion channnel (VDAC) by binding to it and
preventing the release of the caspase activator, cytochrome c, from the mitochondrial membrane.
The Bcl-X(S) isoform promotes apoptosis

Gene Wiki entry for BCL2L1 (BCL2-like_1)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the BCL2L1 gene  

Entrez Gene cytogenetic band: 20q11.21   Ensembl cytogenetic band:  20q11.21   HGNC cytogenetic band: 20q11.21

BCL2L1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20M029715:     (about GC identifiers)

Start:
29,715,916 bp from pter
End:
29,774,324 bp from pter
Size:
58,409 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000020.9  NT_028392.5  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: B2CL1_HUMAN, Q07817 (See protein sequence)
Recommended Name: Bcl-2-like protein 1  
Size: 233 amino acids; 26049 Da
Subunit: Bcl-X(L) forms homodimers, and heterodimers with BAX, BAK and BCL2. Heterodimerization
with BAX does not seem to be required for anti-apoptotic activity. Also interacts with BAD and
BBC3. Isoform Bcl-X(L) binds to Siva isoform 1. Interacts with BCL2L11 (By similarity). Interacts
with BECN1 and PGAM5. Isoform Bcl-X(L) interacts with BAX isoform Sigma
Subcellular location: Mitochondrion membrane; Single-pass membrane protein (By similarity). Nucleus
membrane; Single-pass membrane protein; Cytoplasmic side (By similarity). Note=Mitochondrial
membranes and perinuclear envelope (By similarity)
PDB structures from and Proteopedia :
1BXL (3D)    1G5J (3D)    1LXL (3D)    1MAZ (3D)    1R2D (3D)    1R2E (3D)    1R2G (3D)    1R2H (3D)    
1R2I (3D)    1YSG (3D)    1YSI (3D)    1YSN (3D)    2B48 (3D)    2O1Y (3D)    2O2M (3D)    2O2N (3D)    
2P1L (3D)    2PON (3D)    2YXJ (3D)    3CVA (3D)    3FDL (3D)    3FDM (3D)    
Secondary accessions: Q5CZ89 Q5TE65 Q92976
Alternative splicing: 3 isoforms:  Q07817-1   Q07817-2   Q07817-3   

Post-translational modifications:

  • Proteolytically cleaved by caspases during apoptosis. The cleaved protein, lacking the BH4 motif,
    has pro-apoptotic activity1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001182.1  NP_612815.1  


    ENSEMBL proteins: 
    ENSP00000302564 ENSP00000365230 ENSP00000365223 ENSP00000365228 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Sigma-Aldrich Proteins for BCL2L1  
    R&D Systems Recombinant & Natural Proteins for BCL2L1 (Bcl-xL)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (BCL2L1)
    Human Recombinant Proteins from Abnova (BCL2L1)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    5/6 Gene Ontology (GO) cellular component terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634 nucleus IEA--
    GO:0005739 mitochondrion IDA12011449
    GO:0005741 mitochondrial outer membrane NAS12667443
    GO:0016020 membrane IEA--
    GO:0016021 integral to membrane IEA--
    About this table

    Antibodies for BCL2L1: 
    Invitrogen Antibodies for BCL2L1
    Millipore Mono- and Polyclonal Antibodies for the study of BCL2L1
    Sigma-Aldrich Antibody Arrays and Antibodies for BCL2L1
    R&D Systems Antibodies for BCL2L1 (Bcl-x, Bcl-xL)
    Cell Signaling Technology (CST) Antibodies for BCL2L1  (Bcl-XL)
    Antibodies from Abcam (BCL2L1), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (BCL2L1)
    Novus Biologicals Antibodies for BCL2L1

    Assays for BCL2L1: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    R&D Systems ELISAs for BCL2L1 (Bcl-xL)         (see all)
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5 InterPro domains/families:
     IPR000712 Bcl2_BH
     IPR003093 Bcl2_BH4
     IPR002475 BCL2_apoptsis
     IPR013279 Apop_reg_BclX
     IPR004725 Bcl2_reg


       GeneDecks  BCL2L1 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q07817

    ProtoNet protein and cluster: Q07817

    2 Blocks protein families:
    IPB000712 Apoptosis regulator Bcl-2 protein
    IPB003093 Apoptosis regulator Bcl-2 protein


    UniProtKB/Swiss-Prot: B2CL1_HUMAN, Q07817
    Domain: The BH4 motif is required for anti-apoptotic activity. The BH1 and BH2 motifs are required
    for both heterodimerization with other Bcl-2 family members and for repression of cell death
    Similarity: Belongs to the Bcl-2 family

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BCL2L1)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BCL2L1)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_138578

                  Applied Biosystems Silencer® siRNAs for BCL2L1

                  Sigma-Aldrich siRNA and siRNA Panels for BCL2L1  
                         Sigma-Aldrich shRNA Panels and shRNA for BCL2L1  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for BCL2L1
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001191
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001191
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001191 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_138578

    UniProtKB/Swiss-Prot: B2CL1_HUMAN, Q07817
    Function: Potent inhibitor of cell death. Isoform Bcl-X(L) anti-apoptotic activity is inhibited by
    association with SIVA isoform 1. Inhibits activation of caspases (By similarity). Appears to
    regulate cell death by blocking the voltage-dependent anion channnel (VDAC) by binding to it and
    preventing the release of the caspase activator, cytochrome c, from the mitochondrial membrane.
    The Bcl-X(S) isoform promotes apoptosis

    11 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Bcl2l1):

    behavior/neurologicalcellularendocrine/exocrine glandgrowth/sizehematopoietic system
    immune systemlethality-prenatal/perinatalnervous systemreproductive systemskin/coat/nails
    tumorigenesis

    1 Gene Ontology (GO) molecular function term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0042802 identical protein binding IPI15131699
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/14 Invitrogen iPath™ Online BioAtlas - Pathways for BCL2L1 (see all 14 ) (Maps provided by GeneGo):
     Regulation of apoptosis by mitochondrial proteins
     Cytoplasm/mitochondrial transport of proapoptotic proteins Bad and Bax
     BCR pathway
     Anti-apoptotic TNFs/NF-kB/Bcl-2 pathway
     CD28 signaling

       GeneDecks  BCL2L1 for the pathways selected above  
    About GeneDecksing

    5/16 Millipore Pathways for BCL2L1 (see all 16 )
     Apoptosis and survival Anti-apoptotic TNFs/NF-kB/Bcl-2 pathway
     Apoptosis and survival Anti-apoptotic action of membrane-bound ESR1
     Immune response IL-22 signaling pathway
     Development Prolactin receptor signaling
     Apoptosis and survival APRIL and BAFF signaling

       GeneDecks  BCL2L1 for the pathways selected above  
    About GeneDecksing

    5/19 Sigma-Aldrich "Your Favorite Gene" Pathways for  BCL2L1  (Your Favorite Gene powered by Ingenuity) (see all 19
     GM-CSF Signaling
     IL-15 Signaling
     p53 Signaling
     PTEN Signaling
     CD27 Signaling in Lymphocytes

       GeneDecks  BCL2L1 for the pathways selected above  
    About GeneDecksing

    3 Cell Signaling Technology (CST) Pathways for BCL2L1: 
     Mitochondrial Control of Apoptosis
     B Cell Receptor Signaling
     Akt/PKB Signaling

       GeneDecks  BCL2L1 for the pathways selected above  
    About GeneDecksing

    5/7 Kegg Pathways  (Kegg details for BCL2L1) (see all 7 ):
     hsa04210 Apoptosis
     hsa04630 Jak-STAT signaling pathway
     hsa05014 Amyotrophic lateral sclerosis (ALS)
     hsa05200 Pathways in cancer
     hsa05212 Pancreatic cancer

       GeneDecks  BCL2L1 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  BCL2L1 


    5/207 Interacting proteins for BCL2L1 (ENSP000003652303 Q078171, 2) via UniProtKB, MINT, and/or STRING (see all 207 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    BBC3Q9BXH11STRING (score=.999) EBI-287195, EBI-519884
    BCAP31P515721STRING (score=.833) EBI-78035, EBI-77683
    BIDP559571STRING (score=.998) EBI-287195, EBI-519672
    BIKQ133231STRING (score=.999) EBI-287195, EBI-700794
    HRKO001981STRING (score=.999) EBI-287195, EBI-701322
    About this table

    5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001836 release of cytochrome c from mitochondria IDA9843949
    GO:0006916 anti-apoptosis IDA12011449 16608847
    GO:0008634 negative regulation of survival gene product expression TAS8358789
    GO:0042981 regulation of apoptosis IEA--
    GO:0046902 regulation of mitochondrial membrane permeability IDA9843949
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Enzo Life Sciences drugs & compounds for BCL2L1
    Browse Small Molecules at Sigma-Aldrich

    Compounds for BCL2L1 available from Tocris Bioscience
    CompoundAction CAS number
    2,3-DCPE hydrochlorideSelectively induces cancer cell apoptosis[418788-90-6]
    GossypolPro-apoptotic; downregulates Bcl-2 and Bcl-XL[303-45-7]
    HA14-1Bcl-2 inhibitor. Induces apoptosis[65673-63-4]
    About this table


    10/49 Novoseek chemical compound relationships for BCL2L1 gene (see all 49 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    noxa 69.38 14 19366803 (1), 16273296 (1), 18418772 (1), 17569614 (1) (see all 13)
    sp 600125 58.85 2 18281123 (1)
    dutp 58.41 7 15182618 (1), 15671112 (1), 11485911 (1), 16712812 (1) (see all 6)
    antimycin a3 57.76 2 17273826 (1)
    ceramide 52.82 37 9841888 (5), 11801602 (4), 12387875 (3), 10196212 (3) (see all 17)
    pd-184352 51.81 3 17218385 (1), 11431348 (1), 14645670 (1)
    phosphatidylinositol 49.42 18 11756417 (3), 9092570 (2), 11098053 (2), 19223576 (1) (see all 12)
    chalcone 46.89 1 17845507 (1)
    pd 98,059 46.54 5 16911523 (1), 10516758 (1), 15459189 (1), 11098053 (1) (see all 5)
    wortmannin 45.33 11 12894518 (5), 10698527 (1), 16500719 (1), 15120184 (1) (see all 6)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BCL2L1)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BCL2L1)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_138578

                  Sigma-Aldrich siRNA and siRNA Panels for BCL2L1  
                         Sigma-Aldrich shRNA Panels and shRNA for BCL2L1  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001191  NM_138578  

    REFSEQ mRNAs for BCL2L1 gene (2 alternative transcripts): 

    NM_001191.2   NM_138578.1   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001191  NM_138578  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001191
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001191
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001191 

    Additional cDNA sequence: 

    AK290968.1 AY263335.1 AY263336.1 AY263337.1 BC019307.1 BT007208.1 BX647525.1 CR936637.1 
    Z23115.1 Z23116.1 

    24 DOTS entries:

    DT.101984602  DT.100824803  DT.100033618  DT.92454063  DT.95277896  DT.95322400  DT.101959134  DT.97857304 
    DT.100824812  DT.100824811  DT.100824816  DT.100824805  DT.92454059  DT.97860277  DT.91851155  DT.120812879 
    DT.95277878  DT.100824807  DT.100033609  DT.100824814  DT.120812945  DT.100033608  DT.100680697  DT.92454062 

    24/550 AceView cDNA sequences (see all 550 ):

    BQ636684 BQ653872 BG479739 BI824161 BE395937 BF476362 BQ645057 BM920667 
    AA883070 BQ646713 BU168984 BQ654165 BG746689 R05464 BU157566 BQ647522 
    BQ646844 BM549716 BQ648110 AA323426 BU528551 BM842543 BQ070711 BM820164 

    highest scoring ESTs for BCL2L1:

    AY263335 AY263336 BC019307 BE788685 BF128036 BG752203 BG764073 BI022254 BI824161 BM543578 

    Unigene Cluster for BCL2L1:

    BCL2-like 1
    Hs.516966  [show with all ESTs]
    Unigene Representative Sequence: CR936637


    GeneLoc Exon Structure

    5/8 Alternative Splicing Database (ASD) splice patterns (SP) for BCL2L1 (see all 8 )

    ExUns: 1 ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b · 4c ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b · 8c · 8d · 8e · 8f
    SP1:        -     -     -     -     -     -                             -     -                                       
    SP2:                    -     -     -                                   -     -                                       
    SP3:                    -     -     -     -                             -     -                                       
    SP4:                                                                    -                                             
    SP5:                                -                                                                                 

    About this scheme

    ECgene alternative splicing isoforms for BCL2L1

    4 Ensembl transcripts including schematic representations:
    ENST00000307677  ENST00000376062  ENST00000376055  ENST00000376060  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    BCL2L1 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for BCL2L1

    1 / 2 / 3

    9 probe-sets matching BCL2L1 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    1615_at2, 3 U95-A 1 1.00 1.00 0.80 0.78 Z23115 0.80 1.00 0.91 1

    65477_at2, 3 U95-C 1 1.00 1.00 0.92 1.41 T15735 0.60 1.00 0.82 1
    34742_at2, 3 U95-A 1 1.00 1.00 0.95 0.81 Z23115 0.80 1.00 0.91 1

    215037_s_at2 U133-A 1 1.00 1.00 -- -- -- -- -- -- --

    212312_at2 U133-A 1 1.00 1.00 -- -- -- -- -- -- --

    206665_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001191 0.60 1.00 0.82 1

    215037_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    212312_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    206665_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    GeneDecks  BCL2L1 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: CCTGTCCAGC

    SOURCE GeneReport for Unigene cluster: Hs.516966

    Expression variation in blood from EXPOLDB for BCL2L1

    UniProtKB/Swiss-Prot: B2CL1_HUMAN, Q07817
    Tissue specificity: Bcl-X(S) is expressed at high levels in cells that undergo a high rate of
    turnover, such as developing lymphocytes. In contrast, Bcl-X(L) is found in tissues containing
    long-lived postmitotic cells, such as adult brain

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for BCL2L1 gene from 5/8 species (see all 8 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    BCL2L11   -- BCL2-like 1 96.57(n)
    100(a)
    403618  NM_001003072.1  NP_001003072.1 
    chimpanzee
    (Pan troglodytes)
    BCL2L11   -- BCL2-like 1 99.86(n)
    100(a)
    458156  XM_514565.2  XP_514565.2 
    cow
    (Bos taurus)
    BCL2L11   -- BCL2-like 1 94.99(n)
    97.85(a)
    282152  NM_001077486.1  NP_001070954.1 
    rat
    (Rattus norvegicus)
    Bcl2l11   -- Bcl2-like 1 93.85(n)
    97.85(a)
    24888  NM_001033670.1  NP_001028842.1 
    mouse
    (Mus musculus)
    Bcl2l11, 5 2 (87.50 cM)5
    BCL2-like 11, 5 93.56(n)1
    97.85(a)1
    120481  NM_009743.41  NP_033873.31 
     AF0889045  AF1332795  (see all 31)
    About this table        Species with no ortholog for BCL2L1

    ENSEMBL Gene Tree for BCL2L1
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for BCL2L1 gene
    BCL2L7P12  BCL2L22  BCL22  BAX2  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/288 NCBI SNPs in BCL2L1 are shown (see all 288 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 105)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 20 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs60605811,2
    C,H29715483(+) accttC/Ttgatg 2 -- ng514Minor allele frequency- T:0.00EU EA WA 418
    --
    rs115504731,2
    H29773493(-) GCCCCG/ACGGTG 2 T/A mis1 ese34Minor allele frequency- A:0.00EU EA WA 406
    rs73628901,2
    H29717447(+) GAACCA/CCGCCG 2 V/G mis14Minor allele frequency- C:0.00EU EA WA 416
    rs73445541,2
    H29715523(+) acaCCC/TTACAG 2 -- ng514Minor allele frequency- T:0.00EU EA WA 416
    --
    rs171229051,2
    F29775219(-) CCCCCC/TACGGC 2 -- ng312Minor allele frequency- T:0.01MN EA 356
    rs60877721,2
    H29774094(+) TCCGCC/TTTAGG 2 -- ut51 ese34Minor allele frequency- T:0.00EU EA WA 416
    rs61196521,2
    A,C,F,H29723106(+) GTGAGC/GAAGGC 2 -- int17Minor allele frequency- G:0.30EU EA WA NA 562
    rs60606271,2
    A,C,F,H29725820(+) ATGATC/TTGTGA 2 -- int17Minor allele frequency- T:0.33EU EA WA NA 560
    rs60606331,2
    A,C,F,H29726978(+) AGTGAG/TGTTTG 2 -- int14Minor allele frequency- T:0.23EU EA WA 416
    rs61211721,2
    A,C,F,H29759756(+) GGAAGA/CAGCAG 2 -- int1 trp34Minor allele frequency- C:0.30EU EA WA 416
    About this table

    HapMap Linkage Disequilibrium images for BCL2L1 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 600039

    10/93 Novoseek disease relationships for BCL2L1 gene (see all 93 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    tumors 67.42 338 19209227 (6), 9060818 (5), 8909234 (4), 17699103 (4) (see all 99)
    cancer 63.35 126 14613034 (4), 12915656 (3), 12120204 (3), 16081848 (3) (see all 86)
    leukemia 58.46 33 11961058 (2), 10516758 (2), 11523242 (2), 16219908 (2) (see all 26)
    necrosis 56.68 38 11292287 (2), 9209397 (2), 17011514 (1), 8616866 (1) (see all 33)
    colon cancer 54.22 31 17534896 (4), 18200666 (2), 15314290 (2), 15205359 (2) (see all 23)
    prostate cancer 52.50 57 11929841 (4), 16794010 (3), 18196538 (3), 12633850 (3) (see all 29)
    myeloid leukemia 49.81 8 9204972 (2), 11410409 (1), 14726688 (1), 8853905 (1) (see all 6)
    lymphoma 48.59 47 11869534 (4), 8616083 (3), 12969962 (3), 17096886 (3) (see all 23)
    myeloma 48.52 21 10583232 (4), 9163609 (2), 15970928 (1), 9664139 (1) (see all 15)
    hnscc 46.31 27 17971900 (4), 17848273 (4), 18566236 (3), 19246337 (3) (see all 11)
    About this table

    Genetic Association Database: BCL2L1
    Human Genome Epidemiology Navigator: BCL2L1 (5 documents)
    Tumor Gene Database: BCL2L1

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/1708 PubMed articles for BCL2L1 gene (see all 1708 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 598 HGNC: 992 AceView: BCL2L1 Ensembl:ENSG00000171552 euGenes: HUgn598
    ECgene: BCL2L1 H-InvDB: BCL2L1
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for BCL2L1 Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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