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Aliases for BCAS2P2 Gene

Aliases for BCAS2P2 Gene

  • BCAS2, Pre-MRNA Processing Factor Pseudogene 2 2 3 5
  • Breast Carcinoma Amplified Sequence 2 Pseudogene 2 2

External Ids for BCAS2P2 Gene

Previous GeneCards Identifiers for BCAS2P2 Gene

  • GC01M100860

Summaries for BCAS2P2 Gene

GeneCards Summary for BCAS2P2 Gene

BCAS2P2 (BCAS2, Pre-MRNA Processing Factor Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCAS2P2 Gene

Genomics for BCAS2P2 Gene

Regulatory Elements for BCAS2P2 Gene

Enhancers for BCAS2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G100394 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.6 -2599 5.3 HDGF PKNOX1 ZNF266 ZNF394 ATF2 ARID1B ZNF316 SMARCA4 MAFK PRDM1 CDC14A GPR88 MFSD14A BCAS2P2 GC01M100458
GH01G100399 1.3 Ensembl ENCODE dbSUPER 0.4 -6.5 -6491 1.9 HDAC1 SOX13 CTCF PKNOX1 SAP130 ZNF175 MAX FEZF1 RAD21 ZNF7 BCAS2P2 GC01M100458
GH01G100348 1.7 FANTOM5 ENCODE dbSUPER 0.3 +41.8 41793 7.1 CREB3L1 AGO1 FEZF1 DMAP1 YBX1 YY1 ZNF143 ZNF263 SP3 NFYC CDC14A MFSD14A SLC30A7 BRI3P1 ENSG00000235795 HNRNPA1P68 SASS6 TRMT13 RTCA VCAM1
GH01G100413 1.2 Ensembl ENCODE dbSUPER 0.4 -19.1 -19142 0.3 SOX5 SOX13 GATAD2A TFAP4 TFE3 FOXA2 FOXA3 CEBPB HMG20A EP300 BCAS2P2 GC01M100458
GH01G100362 1.6 FANTOM5 ENCODE dbSUPER 0.3 +31.0 30964 0.6 HNRNPUL1 HDGF PKNOX1 ATF1 CREB3L1 ARNT YY1 SP3 GTF2B ZNF592 MFSD14A CDC14A SLC30A7 BRI3P1 MIR553 SASS6 BCAS2P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BCAS2P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for BCAS2P2 Gene

Chromosome:
1
Start:
100,393,033 bp from pter
End:
100,394,026 bp from pter
Size:
994 bases
Orientation:
Minus strand

Genomic View for BCAS2P2 Gene

Genes around BCAS2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BCAS2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BCAS2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCAS2P2 Gene

Proteins for BCAS2P2 Gene

Post-translational modifications for BCAS2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCAS2P2 Gene

Domains & Families for BCAS2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BCAS2P2 Gene

Function for BCAS2P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BCAS2P2 Gene

Localization for BCAS2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BCAS2P2 Gene

Pathways & Interactions for BCAS2P2 Gene

SuperPathways for BCAS2P2 Gene

No Data Available

Interacting Proteins for BCAS2P2 Gene

Gene Ontology (GO) - Biological Process for BCAS2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BCAS2P2 Gene

Drugs & Compounds for BCAS2P2 Gene

No Compound Related Data Available

Transcripts for BCAS2P2 Gene

mRNA/cDNA for BCAS2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BCAS2P2 Gene

No ASD Table

Relevant External Links for BCAS2P2 Gene

GeneLoc Exon Structure for
BCAS2P2
ECgene alternative splicing isoforms for
BCAS2P2

Expression for BCAS2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BCAS2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of BCAS2P2 Gene:

BCAS2P2
genes like me logo Genes that share expression patterns with BCAS2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BCAS2P2 Gene

Orthologs for BCAS2P2 Gene

Evolution for BCAS2P2 Gene

ENSEMBL:
Gene Tree for BCAS2P2 (if available)
TreeFam:
Gene Tree for BCAS2P2 (if available)

No data available for Orthologs for BCAS2P2 Gene

Paralogs for BCAS2P2 Gene

No data available for Paralogs for BCAS2P2 Gene

Variants for BCAS2P2 Gene

Relevant External Links for BCAS2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BCAS2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BCAS2P2 Gene

Disorders for BCAS2P2 Gene

Relevant External Links for BCAS2P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BCAS2P2

No disorders were found for BCAS2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BCAS2P2 Gene

Publications for BCAS2P2 Gene

No publications were found for BCAS2P2 Gene.

Products for BCAS2P2 Gene

Sources for BCAS2P2 Gene

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