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Aliases for BCAS2P2 Gene

Aliases for BCAS2P2 Gene

  • BCAS2, Pre-MRNA Processing Factor Pseudogene 2 2 3 5
  • Breast Carcinoma Amplified Sequence 2 Pseudogene 2 2

External Ids for BCAS2P2 Gene

Previous GeneCards Identifiers for BCAS2P2 Gene

  • GC01M100860

Summaries for BCAS2P2 Gene

GeneCards Summary for BCAS2P2 Gene

BCAS2P2 (BCAS2, Pre-MRNA Processing Factor Pseudogene 2) is a Pseudogene.

Additional gene information for BCAS2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCAS2P2 Gene

Genomics for BCAS2P2 Gene

GeneHancer (GH) Regulatory Elements for BCAS2P2 Gene

Promoters and enhancers for BCAS2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I100393 Enhancer 0.5 FANTOM5 dbSUPER 550.8 +0.7 654 0.1 BCAS2P2 GPR88 CDC14A MFSD14A SLC35A3
GH01I100394 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.6 -2598 5.3 HDGF CTCF SMARCA4 ZNF266 CBFA2T3 ATF2 CDC14A SLC30A7 HNRNPA1P68 MFSD14A ENSG00000235795 BRI3P1 SASS6 TRMT13 GPR88 BCAS2P2
GH01I100348 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +41.8 41793 7.1 FEZF1 DMAP1 YBX1 YY1 ZNF213 ZNF143 ZNF263 SP3 NFYC MEF2D CDC14A MFSD14A SLC30A7 BRI3P1 TRMT13 SASS6 HNRNPA1P68 ENSG00000235795 RTCA VCAM1
GH01I100399 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.5 -6490 1.9 HDAC1 SOX13 PKNOX1 SAP130 MAX FEZF1 E4F1 ZNF7 ZNF316 POLR2A BCAS2P2 GC01M100458 CDC14A
GH01I100362 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.3 +31.0 30963 0.6 HDGF HNRNPUL1 PKNOX1 SMAD1 ATF1 ARNT YY1 POLR2B ATF7 SP3 MFSD14A SLC30A7 BRI3P1 HNRNPA1P68 CDC14A TRMT13 MIR553 ENSG00000235795 SASS6 BCAS2P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BCAS2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BCAS2P2 Gene

Genomic Locations for BCAS2P2 Gene
chr1:100,393,033-100,394,026
(GRCh38/hg38)
Size:
994 bases
Orientation:
Minus strand
chr1:100,858,589-100,859,582
(GRCh37/hg19)

Genomic View for BCAS2P2 Gene

Genes around BCAS2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BCAS2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BCAS2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCAS2P2 Gene

Proteins for BCAS2P2 Gene

Post-translational modifications for BCAS2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCAS2P2 Gene

Domains & Families for BCAS2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BCAS2P2 Gene

Function for BCAS2P2 Gene

Phenotypes From GWAS Catalog for BCAS2P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BCAS2P2 Gene

Localization for BCAS2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BCAS2P2 Gene

Pathways & Interactions for BCAS2P2 Gene

SuperPathways for BCAS2P2 Gene

No Data Available

Interacting Proteins for BCAS2P2 Gene

Gene Ontology (GO) - Biological Process for BCAS2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BCAS2P2 Gene

Drugs & Compounds for BCAS2P2 Gene

No Compound Related Data Available

Transcripts for BCAS2P2 Gene

mRNA/cDNA for BCAS2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BCAS2P2 Gene

No ASD Table

Relevant External Links for BCAS2P2 Gene

GeneLoc Exon Structure for
BCAS2P2
ECgene alternative splicing isoforms for
BCAS2P2

Expression for BCAS2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BCAS2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of BCAS2P2 Gene:

BCAS2P2
genes like me logo Genes that share expression patterns with BCAS2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BCAS2P2 Gene

Orthologs for BCAS2P2 Gene

Evolution for BCAS2P2 Gene

ENSEMBL:
Gene Tree for BCAS2P2 (if available)
TreeFam:
Gene Tree for BCAS2P2 (if available)

No data available for Orthologs for BCAS2P2 Gene

Paralogs for BCAS2P2 Gene

No data available for Paralogs for BCAS2P2 Gene

Variants for BCAS2P2 Gene

Additional Variant Information for BCAS2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BCAS2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BCAS2P2 Gene

Disorders for BCAS2P2 Gene

Additional Disease Information for BCAS2P2

No disorders were found for BCAS2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BCAS2P2 Gene

Publications for BCAS2P2 Gene

No publications were found for BCAS2P2 Gene.

Products for BCAS2P2 Gene

Sources for BCAS2P2 Gene

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