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Aliases for BCAS2P1 Gene

Aliases for BCAS2P1 Gene

  • BCAS2, Pre-MRNA Processing Factor Pseudogene 1 2 3
  • Breast Carcinoma Amplified Sequence 2 Pseudogene 1 2 5

External Ids for BCAS2P1 Gene

Previous GeneCards Identifiers for BCAS2P1 Gene

  • GC11P082844

Summaries for BCAS2P1 Gene

GeneCards Summary for BCAS2P1 Gene

BCAS2P1 (BCAS2, Pre-MRNA Processing Factor Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCAS2P1 Gene

Genomics for BCAS2P1 Gene

Regulatory Elements for BCAS2P1 Gene

Enhancers for BCAS2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F083127 0.7 ENCODE 0.8 -4.8 -4805 0.2 PKNOX1 TBL1XR1 MTA2 JUNB TRIM22 TBX21 EP300 JUND IKZF1 TARDBP BCAS2P1 GC11P083121
GH11F083121 1.1 Ensembl ENCODE 0.4 -9.8 -9816 1.1 HDAC1 PKNOX1 TBL1XR1 ZNF766 GATA2 CREM CEBPB NCOA1 ZEB2 SMARCA4 GC11P083121 BCAS2P1
GH11F083141 0.7 ENCODE 0.4 +9.2 9216 0.2 SMARCE1 MTA2 RNF2 ZEB2 DPF2 ARID1B SMARCA4 IKZF1 TARDBP MLLT1 RAB30 RAB30-AS1 ENSG00000254522 SNORA70E ENSG00000254698 BCAS2P1 GC11M083155
GH11F083151 0.9 ENCODE 0.3 +19.8 19756 0.2 HDAC1 PKNOX1 ATF1 KLF17 FOS CREM ZNF362 ZBTB2 JUNB ZEB2 RAB30 RAB30-AS1 GC11M083155 BCAS2P1
GH11F083140 0.5 ENCODE 0.4 +8.9 8876 0.2 SMARCE1 MTA2 IKZF1 RAB30 RAB30-AS1 ENSG00000254522 SNORA70E ENSG00000254698 BCAS2P1 GC11M083155
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BCAS2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BCAS2P1 Gene

Chromosome:
11
Start:
83,132,038 bp from pter
End:
83,134,737 bp from pter
Size:
2,700 bases
Orientation:
Plus strand

Genomic View for BCAS2P1 Gene

Genes around BCAS2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BCAS2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BCAS2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCAS2P1 Gene

Proteins for BCAS2P1 Gene

Post-translational modifications for BCAS2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCAS2P1 Gene

Domains & Families for BCAS2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BCAS2P1 Gene

Function for BCAS2P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BCAS2P1 Gene

Localization for BCAS2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BCAS2P1 Gene

Pathways & Interactions for BCAS2P1 Gene

SuperPathways for BCAS2P1 Gene

No Data Available

Interacting Proteins for BCAS2P1 Gene

Gene Ontology (GO) - Biological Process for BCAS2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BCAS2P1 Gene

Transcripts for BCAS2P1 Gene

mRNA/cDNA for BCAS2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BCAS2P1 Gene

No ASD Table

Relevant External Links for BCAS2P1 Gene

GeneLoc Exon Structure for
BCAS2P1
ECgene alternative splicing isoforms for
BCAS2P1

Expression for BCAS2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BCAS2P1 Gene

mRNA differential expression in normal tissues according to GTEx for BCAS2P1 Gene

This gene is overexpressed in Prostate (x26.0) and Uterus (x15.1).

NURSA nuclear receptor signaling pathways regulating expression of BCAS2P1 Gene:

BCAS2P1
genes like me logo Genes that share expression patterns with BCAS2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BCAS2P1 Gene

Orthologs for BCAS2P1 Gene

Evolution for BCAS2P1 Gene

ENSEMBL:
Gene Tree for BCAS2P1 (if available)
TreeFam:
Gene Tree for BCAS2P1 (if available)

No data available for Orthologs for BCAS2P1 Gene

Paralogs for BCAS2P1 Gene

No data available for Paralogs for BCAS2P1 Gene

Variants for BCAS2P1 Gene

Relevant External Links for BCAS2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BCAS2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BCAS2P1 Gene

Disorders for BCAS2P1 Gene

Relevant External Links for BCAS2P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BCAS2P1

No disorders were found for BCAS2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BCAS2P1 Gene

Publications for BCAS2P1 Gene

No publications were found for BCAS2P1 Gene.

Products for BCAS2P1 Gene

Sources for BCAS2P1 Gene

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