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Aliases for BCAR4 Gene

Subcategory (RNA class) for BCAR4 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for BCAR4 Gene

  • Breast Cancer Anti-Estrogen Resistance 4 (Non-Protein Coding) 2 3
  • Breast Cancer Anti-Estrogen Resistance 4 2

External Ids for BCAR4 Gene

ORGUL Members for BCAR4 Gene

Summaries for BCAR4 Gene

GeneCards Summary for BCAR4 Gene

BCAR4 (Breast Cancer Anti-Estrogen Resistance 4 (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class. Diseases associated with BCAR4 include breast cancer.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BCAR4 Gene

Genomics for BCAR4 Gene

Genomic Location for BCAR4 Gene

Start:
11,819,829 bp from pter
End:
11,828,845 bp from pter
Size:
9,017 bases
Orientation:
Minus strand

Genomic View for BCAR4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BCAR4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCAR4 Gene

Regulatory Elements for BCAR4 Gene

Proteins for BCAR4 Gene

  • Protein details for BCAR4 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D3DUG6-D3DUG6
    Recommended name:
    Breast cancer antiestrogen resistance 4 protein
    Protein Accession:
    D3DUG6
    Secondary Accessions:

    Protein attributes for BCAR4 Gene

    Size:
    121 amino acids
    Molecular mass:
    13174 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BCAR4 Gene

Proteomics data for BCAR4 Gene at MOPED

Post-translational modifications for BCAR4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCAR4 Gene

Domains for BCAR4 Gene

Gene Families for BCAR4 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for BCAR4 Gene

ProtoNet:
genes like me logo Genes that share domains with BCAR4: view

No data available for UniProtKB/Swiss-Prot for BCAR4 Gene

Function for BCAR4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BCAR4 Gene

Localization for BCAR4 Gene

No data available for Gene Ontology (GO) - Cellular Components for BCAR4 Gene

Pathways for BCAR4 Gene

SuperPathways for BCAR4 Gene

No Data Available

Interacting Proteins for BCAR4 Gene

Gene Ontology (GO) - Biological Process for BCAR4 Gene

None

No data available for Pathways by source for BCAR4 Gene

Transcripts for BCAR4 Gene

Unigene Clusters for BCAR4 Gene

Breast cancer anti-estrogen resistance 4 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BCAR4 Gene

No ASD Table

Relevant External Links for BCAR4 Gene

GeneLoc Exon Structure for
BCAR4
ECgene alternative splicing isoforms for
BCAR4

Expression for BCAR4 Gene

mRNA expression in normal human tissues for BCAR4 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for BCAR4 Gene Hs.24611

genes like me logo Genes that share expressions with BCAR4: view

Orthologs for BCAR4 Gene

Evolution for BCAR4 Gene

ENSEMBL:
Gene Tree for BCAR4 (if available)
TreeFam:
Gene Tree for BCAR4 (if available)

No data available for Orthologs for BCAR4 Gene

Paralogs for BCAR4 Gene

No data available for Paralogs for BCAR4 Gene

Variants for BCAR4 Gene

Sequence variations from dbSNP and Humsavar for BCAR4 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs718080 -- 11,828,657(-) TTATT(A/T)TTTTT nc-transcript-variant, intron-variant
rs718081 -- 11,828,206(-) TATAT(C/T)TTTTT intron-variant
rs846152 -- 11,827,651(-) ttctc(A/C)tgcct intron-variant
rs860134 -- 11,827,680(-) tgcaa(C/G)ctccg intron-variant
rs860135 -- 11,827,669(-) cctcc(C/T)gggtt intron-variant

Relevant External Links for BCAR4 Gene

HapMap Linkage Disequilibrium report
BCAR4

No data available for Structural Variations from Database of Genomic Variants (DGV) for BCAR4 Gene

Disorders for BCAR4 Gene

(1) MalaCards Diseases for BCAR4 Gene

Search for BCAR4 Gene in MalaCards »
genes like me logo Genes that share disorders with BCAR4: view

No data available for UniProtKB/Swiss-Prot for BCAR4 Gene

Publications for BCAR4 Gene

  1. Functional screen for genes responsible for tamoxifen resistance in human breast cancer cells. (PMID: 16778085) Meijer D. … Dorssers L.C. (Mol. Cancer Res. 2006) 2 3
  2. Breast-cancer anti-estrogen resistance 4 (BCAR4) encodes a novel maternal-effect protein in bovine and is expressed in the oocyte of humans and other non-rodent mammals. (PMID: 23202989) Angulo L. … Dalbies-Tran R. (Hum. Reprod. 2013) 2 3
  3. lncRNA directs cooperative epigenetic regulation downstream of chemokine signals. (PMID: 25416949) Xing Z. … Yang L. (Cell 2014) 3
  4. Relevance of BCAR4 in tamoxifen resistance and tumour aggressiveness of human breast cancer. (PMID: 20859285) Godinho M.F. … van Agthoven T. (Br. J. Cancer 2010) 3
  5. Characterization of BCAR4, a novel oncogene causing endocrine resistance in human breast cancer cells. (PMID: 21506106) Godinho M. … van Agthoven T. (J. Cell. Physiol. 2011) 3

Products for BCAR4 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate BCAR4
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for BCAR4
    • Block miRNA regulation of BCAR4 using miScript Target Protectors

    Sources for BCAR4 Gene

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