 |
 | Services
| |
 |
Aliases & Descriptions for BCAR1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CAS 1, 2, 3, 5 | | CAS1 2 | | CASS1 1, 2, 3 | | CRKAS 2, 3, 5 | | Crkas 1 | | P130Cas 1, 2 | | p130cas 3 |
| | | Descriptions |
|---|
| CRK-associated substrate 3 | | Cas scaffolding protein family member 1 2, 3 | | Crk-associated substrate p130Cas 2 | | breast cancer anti-estrogen resistance 1 2 |
|
| | Search outside databases for aliases for BCAR1 genePrevious GC identifers: GC16M066192 GC16M076223 GC16M075001 GC16M075042 |
Summaries for BCAR1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for BCAR1: BCAR1, or CAS, is an Src (MIM 190090) family kinase substrate involved in various cellular events, including migration, survival, transformation, and invasion (Sawada et al., 2006 [PubMed 17129785]).[supplied by OMIM] UniProtKB/Swiss-Prot: BCAR1_HUMAN, P56945Function: Docking protein which plays a central coordinating role for tyrosine-kinase-based signaling related to cell adhesion. Implicated in induction of cell migration. Overexpression confers antiestrogen resistance on breast cancer cellsGene Wiki entry for BCAR1 |
Genomic Location for BCAR1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the BCAR1 gene 
Entrez Gene cytogenetic band: 16q22-q23 Ensembl cytogenetic band: 16q23.1 HGNC cytogenetic band: 16q22-q23BCAR1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure GeneLoc location for GC16M073820:
(about GC identifiers)
Start:
|
73,820,429 bp from pter |
End:
|
73,859,452 bp from pter |
Size:
|
39,024 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000016.8 NT_010498.15
| Proteins for BCAR1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: BCAR1_HUMAN, P56945 (See
protein sequence)Recommended Name: Breast cancer anti-estrogen resistance protein 1 Size: 870 amino acids; 93362 Da
Subunit: Forms complexes in vivo with focal adhesion kinase 1, adapter protein CRKL and LYN kinase. Can heterodimerize with CASL. Interacts with BCAR3, NPHP1, PTK2B and SH2D3C (By similarity). Interacts with activated CSPG4. Interacts with INPPL1/SHIP2
Subcellular location: Cell junction, focal adhesion (By similarity). Cytoplasm (By similarity). Note=Unphosphorylated form localizes in the cytoplasm and can move to the membrane upon tyrosine phosphorylation (By similarity)
PDB structures from and Proteopedia :1WYX (3D)
 Post-translational modifications:
Focal adhesion kinase 1 phosphorylates the protein at the YDYVHL motif. SRC-family kinases are recruited to the phosphorylated sites and can phosphorylate other tyrosine residues. Tyrosine phosphorylation is triggered by integrin mediated adhesion of cells to the extracellular matrix1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_055382.2
ENSEMBL proteins: ENSP00000162330 ENSP00000377074 ENSP00000377072
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: BCAR1 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for BCAR1: Assays for BCAR1: | Protein
Domains/ Families for BCAR1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P56945
ProtoNet protein and cluster: P56945 1 Blocks protein family: IPB001452 SH3 domain signature
UniProtKB/Swiss-Prot: BCAR1_HUMAN, P56945Domain: Contains a central domain (substrate domain) containing multiple potential SH2-binding sites and a C-terminal domain containing a divergent helix-loop-helix (HLH) motif. The SH2-binding sites putatively bind CRK, NCK and ABL SH2 domains. The HLH motif is absolutely required for the induction of pseudohyphal growth in yeast and mediates heterodimerization with CASL (By similarity)Domain: A serine-rich region promotes activation of the serum response element (SRE)Domain: The SH3 domain is necessary for the localization of the protein to focal adhesions and interacts with one proline-rich region of focal adhesion kinase 1Similarity: Belongs to the CAS familySimilarity: Contains 1 SH3 domain | Gene Function for BCAR1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014567
Applied Biosystems Silencer® siRNAs for BCAR1
Sigma-Aldrich siRNA and siRNA Panels for BCAR1  Sigma-Aldrich shRNA Panels and shRNA for BCAR1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_014567                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014567                                  untagged cDNA clone in CMV expression vector: NM_014567 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_014567
UniProtKB/Swiss-Prot: BCAR1_HUMAN, P56945Function: Docking protein which plays a central coordinating role for tyrosine-kinase-based signaling related to cell adhesion. Implicated in induction of cell migration. Overexpression confers antiestrogen resistance on breast cancer cells7 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Bcar1):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for BCAR1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/10 Sigma-Aldrich "Your Favorite Gene" Pathways for BCAR1 (Your Favorite Gene powered by Ingenuity) (see all 10
) 
Gene Network CentralTM Interacting Genes and Proteins Network for BCAR1 
5/127 Interacting proteins for BCAR1 (ENSP000001623303 P569451, 2) via UniProtKB, MINT, and/or STRING (see all 127
)About this table
5/15 Gene Ontology (GO) biological process terms (links to tree view) (see all 15
): About this table
|
Drugs & Compounds for BCAR1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for BCAR1 10/16 Novoseek chemical compound relationships for BCAR1 gene (see all 16
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| tyrosine |
81.77 |
262 |
9748296 (7), 9648724 (6), 7541040 (6), 9575907 (5) (see all 99) |
| phosphotyrosine |
55.88 |
9 |
9422981 (1), 10739664 (1), 9032297 (1), 15044442 (1) (see all 8) |
| phosphatidylinositol |
45.84 |
9 |
9748296 (2), 10842093 (1), 19330798 (1), 10339567 (1) (see all 7) |
| proline |
32.50 |
1 |
16289152 (1) |
| ganglioside |
27.82 |
2 |
18078823 (1), 18538130 (1) |
| 12-o-tetradecanoylphorbol 13-acetate |
14.97 |
8 |
9442079 (3), 12694376 (1) |
| pd 98,059 |
14.90 |
1 |
10737896 (1) |
| threonine |
11.40 |
7 |
11593413 (3), 9922457 (2), 9581808 (1) |
| okadaic acid |
5.73 |
1 |
11593413 (1) |
| calcium |
3.76 |
7 |
9648724 (3), 10093970 (1), 15841322 (1), 9575907 (1) |
About this table
|
Transcripts for BCAR1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014567
Sigma-Aldrich siRNA and siRNA Panels for BCAR1  Sigma-Aldrich shRNA Panels and shRNA for BCAR1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_014567 REFSEQ mRNAs for BCAR1 gene: NM_014567.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_014567               OriGene GFP tagged cDNA clone in CMV expression vector: NM_014567                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014567                                  untagged cDNA clone in CMV expression vector: NM_014567  Additional cDNA sequence: AB040024.1 AF218451.1 AJ242987.2 AK026121.1 AK027608.1 AK074958.1 AK124526.1 AK124815.1 AK124844.1 AK125719.1 AK127004.1 AK293808.1 AK294513.1 AK295809.1 AK302617.1 AK314722.1 AY545071.1 BC014402.1 BC062556.1 CR622696.1 19 DOTS entries: DT.100652053 DT.102840383 DT.454557 DT.95122178 DT.101984968 DT.100777466 DT.86856714 DT.101984970 DT.95079485 DT.95322529 DT.100708641 DT.120680549 DT.120680602 DT.120680562 DT.95090466 DT.120680548 DT.120680552 DT.120680558 DT.120680563 24/339 AceView cDNA sequences (see all 339
):AA364512 BQ688682 CF132221 BG831538 BU542520 BQ447600 BU838220 BU786754 BF345455 BG387070 CA488735 BG775027 NM_014567 AI055829 BG775766 BM826658 BQ771939 CF529831 CF529919 CA418835 BM798009 BU541498 BU157529 AI369230
highest scoring ESTs for BCAR1:AB040024 AF218451 AJ242987 AK027608 AK124526 AK124815 AL040801 AW001536 BG912589 BM545006 Unigene Cluster for BCAR1: Breast cancer anti-estrogen resistance 1 Hs.479747 [show with all ESTs]Unigene Representative Sequence: AK124526
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000162330
ENST00000393422
ENST00000393420
|
Expression for BCAR1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| BCAR1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for BCAR1
1 / 2 / 3 3 probe-sets matching BCAR1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CACCACGGGC
SOURCE GeneReport for Unigene cluster: Hs.479747 UniProtKB/Swiss-Prot: BCAR1_HUMAN, P56945Tissue specificity: Widely expressed with an abundant expression in the testis. Low level of expression seen in the liver, thymus, and peripheral blood leukocytes. The protein has been detected in a B-cell line |
Orthologs for BCAR1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for BCAR1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for BCAR1
ENSEMBL Gene Tree for BCAR1 | Paralogs for BCAR1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for BCAR1 gene
- NEDD92 CASS42 EFS2
|
SNPs/Variants for BCAR1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for BCAR1 (up to first 250kb)
|
Disorders & Mutations for BCAR1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602941
10/13 Novoseek disease relationships for BCAR1 gene (see all 13
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| nphp1 |
77.23 |
1 |
10739664 (1) |
| cystic kidney disease |
54.32 |
1 |
10739664 (1) |
| breast cancer |
32.64 |
28 |
15277346 (5), 15448007 (4), 10639512 (3), 10896938 (2) (see all 13) |
| tumors |
28.03 |
11 |
15448007 (3), 9927060 (1), 18842495 (1), 18845837 (1) (see all 9) |
| colon cancer |
19.59 |
2 |
14667936 (1), 18392556 (1) |
| metastasis |
18.72 |
5 |
18842495 (2), 18845837 (1), 18256281 (1) |
| melanoma |
5.84 |
6 |
18078823 (2), 10587647 (2), 17185516 (1), 18538130 (1) |
| cancer |
4.74 |
1 |
18256281 (1) |
| inflammation |
0.00 |
1 |
12219172 (1) |
| hypertrophy |
0.00 |
1 |
11514617 (1) |
About this table
|
Medical News for BCAR1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for BCAR1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/312 PubMed articles for BCAR1 gene (see all 312
):- BCAR1, a human homologue of the adapter protein p130Cas, induces anti-estrogen resistance in breast cancer cells. (PubMed id 10639512)1, 2, 3, 4 Brinkman A.... Dorssers L.C.J. (2000)
- Melanoma chondroitin sulphate proteoglycan regulates cell spreading through Cdc42, Ack-1 and p130cas. (PubMed id 10587647)1, 3, 4 Eisenmann K.M.... Iida J. (1999)
- A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)3, 4 Beausoleil S.A.... Gygi S.P. (2006)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)3, 4 Rush J.... Comb M.J. (2005)
- Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC). (PubMed id 16212419)3, 4 Amanchy R.... Pandey A. (2005)
- Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. (PubMed id 15951569)3, 4 Zhang Y.... White F.M. (2005)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- SH2-containing inositol 5'-phosphatase SHIP2 associates with the p130(Cas) adapter protein and regulates cellular adhesion and spreading. (PubMed id 11158326)3, 4 Prasad N.... Decker S.J. (2001)
- Induction of antiestrogen resistance in human breast cancer cells by random insertional mutagenesis using defective retroviruses: identification of bcar-1, a common integration site. (PubMed id 8413311)2, 3 Dorssers L.C....Kok E.M. (1993)
|
Search for BCAR1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing BCAR1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing BCAR1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing BCAR1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for BCAR1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for BCAR1:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for BCAR1  (p130cas) |
| | | | Search Tocris compounds for BCAR1 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|