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Aliases for BASP1P1 Gene

Subcategory (RNA class) for BASP1P1 Gene


Aliases for BASP1P1 Gene

  • Brain Abundant, Membrane Attached Signal Protein 1 Pseudogene 1 2 3

External Ids for BASP1P1 Gene

ORGUL Members for BASP1P1 Gene

Previous GeneCards Identifiers for BASP1P1 Gene

  • GC13M023473

Summaries for BASP1P1 Gene

GeneCards Summary for BASP1P1 Gene

BASP1P1 (Brain Abundant, Membrane Attached Signal Protein 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BASP1P1 Gene

Genomics for BASP1P1 Gene

Genomic Location for BASP1P1 Gene

22,897,030 bp from pter
22,898,181 bp from pter
1,152 bases
Minus strand

Genomic View for BASP1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BASP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BASP1P1 Gene

No data available for Regulatory Elements for BASP1P1 Gene

Proteins for BASP1P1 Gene

Post-translational modifications for BASP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BASP1P1 Gene

Domains for BASP1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BASP1P1 Gene

Function for BASP1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BASP1P1 Gene

Localization for BASP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BASP1P1 Gene

Pathways for BASP1P1 Gene

SuperPathways for BASP1P1 Gene

No Data Available

Interacting Proteins for BASP1P1 Gene

Gene Ontology (GO) - Biological Process for BASP1P1 Gene


No data available for Pathways by source for BASP1P1 Gene

Transcripts for BASP1P1 Gene

mRNA/cDNA for BASP1P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BASP1P1 Gene

Brain abundant, membrane attached signal protein 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BASP1P1 Gene

No ASD Table

Relevant External Links for BASP1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BASP1P1 Gene

mRNA expression in normal human tissues for BASP1P1 Gene

mRNA differential expression in normal tissues according to GTEx for BASP1P1 Gene

This gene is overexpressed in Cervix - Endocervix (46.6).

SOURCE GeneReport for Unigene cluster for BASP1P1 Gene Hs.729338

genes like me logo Genes that share expressions with BASP1P1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for BASP1P1 Gene

Orthologs for BASP1P1 Gene

Evolution for BASP1P1 Gene

Gene Tree for BASP1P1 (if available)
Gene Tree for BASP1P1 (if available)

No data available for Orthologs for BASP1P1 Gene

Paralogs for BASP1P1 Gene

No data available for Paralogs for BASP1P1 Gene

Variants for BASP1P1 Gene

Sequence variations from dbSNP and Humsavar for BASP1P1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs932936 -- 22,897,690(-) CCCCC(C/G)TCCCT nc-transcript-variant
rs1887258 -- 22,897,676(-) AATGG(C/T)GGCGA nc-transcript-variant
rs7328194 -- 22,898,129(+) CTCCA(C/T)GGCGG nc-transcript-variant
rs7400076 -- 22,899,151(+) tgata(C/G)taaaa upstream-variant-2KB
rs7489390 -- 22,897,282(+) gagaa(A/G)agatt nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for BASP1P1 Gene

Variant ID Type Subtype PubMed ID
esv2422437 CNV Duplication 17116639
dgv1556n71 CNV Gain 21882294
esv2422502 CNV Duplication 17116639
esv2422445 CNV Duplication 17116639
dgv74e55 CNV Gain 17911159
nsv526435 CNV Gain 19592680
dgv1558n71 CNV Loss 21882294
nsv518408 CNV Loss 19592680
nsv832563 CNV Gain 17160897
nsv832564 CNV Loss 17160897
nsv517940 CNV Gain 19592680

Relevant External Links for BASP1P1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BASP1P1 Gene

Disorders for BASP1P1 Gene

No disorders were found for BASP1P1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for BASP1P1 Gene

Publications for BASP1P1 Gene

  1. Mutational screening of BASP1 and transcribed processed pseudogene TPPsig-BASP1 in patients with MAPbius syndrome. (PMID: 19376485) Uzumcu A. … Basaran S. (J Genet Genomics 2009) 3

Products for BASP1P1 Gene

Sources for BASP1P1 Gene

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