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Aliases for BASP1P1 Gene

Subcategory (RNA class) for BASP1P1 Gene


Aliases for BASP1P1 Gene

  • Brain Abundant, Membrane Attached Signal Protein 1 Pseudogene 1 2 3 5

External Ids for BASP1P1 Gene

ORGUL Members for BASP1P1 Gene

Previous GeneCards Identifiers for BASP1P1 Gene

  • GC13M023473

Summaries for BASP1P1 Gene

GeneCards Summary for BASP1P1 Gene

BASP1P1 (Brain Abundant, Membrane Attached Signal Protein 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for BASP1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BASP1P1 Gene

Genomics for BASP1P1 Gene

Regulatory Elements for BASP1P1 Gene

Enhancers for BASP1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H022883 0.6 ENCODE 6 +14.1 14091 0.7 HDGF POLR2A ZNF207 ELF1 MLLT1 SPI1 BASP1P1 GC13P022850
GH13H022884 0.4 FANTOM5 0.4 +13.6 13578 0.2 MLLT1 BASP1P1 GC13P022850
GH13H022880 0.4 ENCODE 0.4 +16.9 16903 1.7 ZNF687 BASP1P1 GC13P022850
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BASP1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BASP1P1 Gene

Genomic Locations for BASP1P1 Gene
1,152 bases
Minus strand

Genomic View for BASP1P1 Gene

Genes around BASP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BASP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BASP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BASP1P1 Gene

Proteins for BASP1P1 Gene

Post-translational modifications for BASP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BASP1P1 Gene

Domains & Families for BASP1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BASP1P1 Gene

Function for BASP1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BASP1P1 Gene

Localization for BASP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BASP1P1 Gene

Pathways & Interactions for BASP1P1 Gene

SuperPathways for BASP1P1 Gene

No Data Available

Interacting Proteins for BASP1P1 Gene

Gene Ontology (GO) - Biological Process for BASP1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for BASP1P1 Gene

Drugs & Compounds for BASP1P1 Gene

No Compound Related Data Available

Transcripts for BASP1P1 Gene

mRNA/cDNA for BASP1P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BASP1P1 Gene

Brain abundant, membrane attached signal protein 1 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BASP1P1 Gene

No ASD Table

Relevant External Links for BASP1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BASP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BASP1P1 Gene

mRNA differential expression in normal tissues according to GTEx for BASP1P1 Gene

This gene is overexpressed in Cervix - Endocervix (x46.6).

NURSA nuclear receptor signaling pathways regulating expression of BASP1P1 Gene:


SOURCE GeneReport for Unigene cluster for BASP1P1 Gene:

genes like me logo Genes that share expression patterns with BASP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BASP1P1 Gene

Orthologs for BASP1P1 Gene

Evolution for BASP1P1 Gene

Gene Tree for BASP1P1 (if available)
Gene Tree for BASP1P1 (if available)

No data available for Orthologs for BASP1P1 Gene

Paralogs for BASP1P1 Gene

No data available for Paralogs for BASP1P1 Gene

Variants for BASP1P1 Gene

Sequence variations from dbSNP and Humsavar for BASP1P1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000068435 -- 22,898,827(+) AAGAA(A/G)ATTTA intron-variant, upstream-variant-2KB
rs1000733839 -- 22,897,266(+) AAGGA(A/G)AGGAG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001119169 -- 22,899,958(+) GCCAG(A/T)AGTTC intron-variant, upstream-variant-2KB
rs1001777201 -- 22,897,082(+) CCCCA(C/T)AAAAA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1002103362 -- 22,899,909(+) ATTTA(C/T)TGCAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BASP1P1 Gene

Variant ID Type Subtype PubMed ID
dgv1614n100 CNV gain 25217958
dgv3082n54 CNV gain 21841781
nsv832564 CNV loss 17160897
nsv832563 CNV gain 17160897
nsv561279 CNV gain 21841781
nsv561262 CNV gain 21841781
nsv526435 CNV gain 19592680
nsv518408 CNV loss 19592680
nsv517940 CNV gain 19592680
nsv1151909 OTHER inversion 26484159
nsv1140246 OTHER inversion 24896259
nsv1078303 OTHER inversion 25765185
nsv1046767 CNV gain 25217958
esv3892311 CNV gain 25118596
esv3631500 CNV loss 21293372
esv2761277 CNV gain+loss 21179565
esv2422502 CNV duplication 17116639
esv2422445 CNV duplication 17116639
esv2422437 CNV duplication 17116639
dgv74e55 CNV gain 17911159
dgv3083n54 CNV loss 21841781

Relevant External Links for BASP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BASP1P1 Gene

Disorders for BASP1P1 Gene

Relevant External Links for BASP1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BASP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BASP1P1 Gene

Publications for BASP1P1 Gene

  1. Mutational screening of BASP1 and transcribed processed pseudogene TPPsig-BASP1 in patients with Möbius syndrome. (PMID: 19376485) Uzumcu A … Basaran S (Journal of genetics and genomics = Yi chuan xue bao 2009) 3 60

Products for BASP1P1 Gene

Sources for BASP1P1 Gene

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