Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BAIAP3 Gene

Aliases for BAIAP3 Gene

  • BAI1 Associated Protein 3 2 3
  • BAI1-Associated Protein 3 2 5
  • BAP3 3 4
  • BAI-Associated Protein 3 3
  • KIAA0734 4

External Ids for BAIAP3 Gene

Previous GeneCards Identifiers for BAIAP3 Gene

  • GC16P001400
  • GC16P001324
  • GC16P001383

Summaries for BAIAP3 Gene

Entrez Gene Summary for BAIAP3 Gene

  • This p53-target gene encodes a brain-specific angiogenesis inhibitor. The protein is a seven-span transmembrane protein and a member of the secretin receptor family. It interacts with the cytoplasmic region of brain-specific angiogenesis inhibitor 1. This protein also contains two C2 domains, which are often found in proteins involved in signal transduction or membrane trafficking. Its expression pattern and similarity to other proteins suggest that it may be involved in synaptic functions. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2010]

GeneCards Summary for BAIAP3 Gene

BAIAP3 (BAI1 Associated Protein 3) is a Protein Coding gene. Among its related pathways are Transcriptional misregulation in cancer. GO annotations related to this gene include protein C-terminus binding. An important paralog of this gene is UNC13D.

Gene Wiki entry for BAIAP3 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAIAP3 Gene

Genomics for BAIAP3 Gene

Regulatory Elements for BAIAP3 Gene

Enhancers for BAIAP3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around BAIAP3 on UCSC Golden Path with GeneCards custom track

Promoters for BAIAP3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around BAIAP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for BAIAP3 Gene

Chromosome:
16
Start:
1,333,601 bp from pter
End:
1,349,441 bp from pter
Size:
15,841 bases
Orientation:
Plus strand

Genomic View for BAIAP3 Gene

Genes around BAIAP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BAIAP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BAIAP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAIAP3 Gene

Proteins for BAIAP3 Gene

  • Protein details for BAIAP3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O94812-BAIP3_HUMAN
    Recommended name:
    BAI1-associated protein 3
    Protein Accession:
    O94812
    Secondary Accessions:
    • A2A2B2
    • B2RCD7
    • B4DGS5
    • B4DIK3
    • B4DRK9
    • B4DRP1
    • E7EUB9
    • H3BUH8
    • H3BVI3
    • H7C2Q1
    • O94839
    • Q2M226
    • Q658J2
    • Q76N05
    • Q96RZ3
    • Q9UJK1

    Protein attributes for BAIAP3 Gene

    Size:
    1187 amino acids
    Molecular mass:
    131901 Da
    Quaternary structure:
    • Interacts with BAI1.
    SequenceCaution:
    • Sequence=BAA34454.2; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=BAG57886.1; Type=Erroneous termination; Positions=717; Note=Translated as Gly.; Evidence={ECO:0000305};

    Alternative splice isoforms for BAIAP3 Gene

neXtProt entry for BAIAP3 Gene

Proteomics data for BAIAP3 Gene at MOPED

Post-translational modifications for BAIAP3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for BAIAP3 Gene

Domains & Families for BAIAP3 Gene

Gene Families for BAIAP3 Gene

Protein Domains for BAIAP3 Gene

Suggested Antigen Peptide Sequences for BAIAP3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O94812

UniProtKB/Swiss-Prot:

BAIP3_HUMAN :
  • Contains 2 C2 domains.
Domain:
  • Contains 2 C2 domains.
  • Contains 1 MHD1 (MUNC13 homology domain 1) domain.
  • Contains 1 MHD2 (MUNC13 homology domain 2) domain.
genes like me logo Genes that share domains with BAIAP3: view

Function for BAIAP3 Gene

Molecular function for BAIAP3 Gene

GENATLAS Biochemistry:
brain-specific angiogenesis inhibitor (BAI1)-associated protein 3,predominantly expressed in brain,homolog to synaptotagmin,potentially regulating the release of neurotransmitters
genes like me logo Genes that share phenotypes with BAIAP3: view

Animal Models for BAIAP3 Gene

MGI Knock Outs for BAIAP3:

Animal Model Products

miRNA for BAIAP3 Gene

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for BAIAP3 Gene

Localization for BAIAP3 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BAIAP3 Gene COMPARTMENTS Subcellular localization image for BAIAP3 gene
Compartment Confidence
cytosol 1
extracellular 1
lysosome 1
mitochondrion 1
nucleus 1
peroxisome 1
vacuole 1

Gene Ontology (GO) - Cellular Components for BAIAP3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005623 cell TAS --
genes like me logo Genes that share ontologies with BAIAP3: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for BAIAP3 Gene

Pathways & Interactions for BAIAP3 Gene

genes like me logo Genes that share pathways with BAIAP3: view

Pathways by source for BAIAP3 Gene

1 KEGG pathway for BAIAP3 Gene

Interacting Proteins for BAIAP3 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000324510%0d%0a9606.ENSP00000313046%0d%0a
Selected Interacting proteins: ENSP00000324510 O94812-BAIP3_HUMAN for BAIAP3 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for BAIAP3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007269 neurotransmitter secretion TAS 9790924
genes like me logo Genes that share ontologies with BAIAP3: view

No data available for SIGNOR curated interactions for BAIAP3 Gene

Drugs & Compounds for BAIAP3 Gene

(2) Drugs for BAIAP3 Gene - From: PharmGKB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Cisplatin Approved Pharma Inhibits DNA synthesis,chemotherapy drug, Platinum 2569
Irinotecan Approved, Investigational Pharma Topoisomerase I inhibitor, TOPO I inhibitor, Topoisomerase 1 Inhibitors 1055
genes like me logo Genes that share compounds with BAIAP3: view

Transcripts for BAIAP3 Gene

Unigene Clusters for BAIAP3 Gene

BAI1-associated protein 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BAIAP3 Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11a · 11b · 11c ^ 12a · 12b ^ 13a · 13b ^ 14 ^
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11: -
SP12: - -
SP13: -
SP14: - -
SP15: -
SP16:
SP17:
SP18:
SP19:
SP20:
SP21:
SP22: - -
SP23:
SP24: -

ExUns: 15a · 15b · 15c · 15d ^ 16a · 16b · 16c ^ 17a · 17b ^ 18 ^ 19 ^ 20 ^ 21a · 21b · 21c ^ 22 ^ 23a · 23b ^ 24a · 24b ^ 25a · 25b · 25c ^ 26 ^ 27a · 27b ^
SP1: -
SP2:
SP3:
SP4:
SP5:
SP6:
SP7: -
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17:
SP18:
SP19:
SP20:
SP21:
SP22:
SP23:
SP24:

ExUns: 28a · 28b · 28c ^ 29 ^ 30a · 30b ^ 31 ^ 32 ^ 33a · 33b ^ 34
SP1:
SP2: -
SP3:
SP4: - -
SP5: -
SP6:
SP7:
SP8:
SP9:
SP10: -
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17:
SP18:
SP19:
SP20:
SP21:
SP22:
SP23: - - -
SP24:

Relevant External Links for BAIAP3 Gene

GeneLoc Exon Structure for
BAIAP3
ECgene alternative splicing isoforms for
BAIAP3

Expression for BAIAP3 Gene

mRNA expression in normal human tissues for BAIAP3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for BAIAP3 Gene

This gene is overexpressed in Pituitary (x22.4) and Brain - Hypothalamus (x5.6).

Protein differential expression in normal tissues from HIPED for BAIAP3 Gene

This gene is overexpressed in Frontal cortex (26.3), Liver (21.1), Brain (12.2), and Peripheral blood mononuclear cells (9.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for BAIAP3 Gene



SOURCE GeneReport for Unigene cluster for BAIAP3 Gene Hs.458427

mRNA Expression by UniProt/SwissProt for BAIAP3 Gene

O94812-BAIP3_HUMAN
Tissue specificity: Predominantly expressed in brain.
genes like me logo Genes that share expression patterns with BAIAP3: view

Protein tissue co-expression partners for BAIAP3 Gene

Primer Products

Orthologs for BAIAP3 Gene

This gene was present in the common ancestor of animals.

Orthologs for BAIAP3 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia BAIAP3 35
  • 86.42 (n)
  • 89.1 (a)
BAIAP3 36
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BAIAP3 35
  • 85.25 (n)
  • 86.19 (a)
BAIAP3 36
  • 81 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Baiap3 35
  • 85.12 (n)
  • 89.12 (a)
Baiap3 16
Baiap3 36
  • 89 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia BAIAP3 35
  • 97.7 (n)
  • 97.64 (a)
BAIAP3 36
  • 98 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia BAIAP3 36
  • 63 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia BAIAP3 36
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia baiap3 35
  • 58.68 (n)
  • 55.68 (a)
Str.19005 35
zebrafish
(Danio rerio)
Actinopterygii baiap3 35
  • 57.73 (n)
  • 49.52 (a)
baiap3 36
  • 46 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG11819 37
  • 22 (a)
unc-13-4A 37
  • 33 (a)
unc-13-4A 35
  • 48.41 (n)
  • 36.6 (a)
CG34349 36
  • 22 (a)
ManyToMany
unc-13-4A 36
  • 26 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP005816 35
  • 50.31 (n)
  • 37.91 (a)
worm
(Caenorhabditis elegans)
Secernentea F54G2.1 37
  • 27 (a)
F54G2.1 35
  • 43.54 (n)
  • 31.9 (a)
F54G2.1 36
  • 23 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 28 (a)
OneToMany
Species with no ortholog for BAIAP3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for BAIAP3 Gene

ENSEMBL:
Gene Tree for BAIAP3 (if available)
TreeFam:
Gene Tree for BAIAP3 (if available)

Paralogs for BAIAP3 Gene

Paralogs for BAIAP3 Gene

(1) SIMAP similar genes for BAIAP3 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with BAIAP3: view

Variants for BAIAP3 Gene

Sequence variations from dbSNP and Humsavar for BAIAP3 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1132356 - 1,344,506(+) GAATG(A/C)CAAGA reference, missense
rs36074509 - 1,346,479(-) AGAGA(A/C)TGATG reference, missense
rs4261539 -- 1,331,990(+) AAGAC(C/T)GCAGA upstream-variant-2KB
rs9708666 -- 1,345,493(+) tcccc(A/C)tcaac intron-variant
rs13334032 -- 1,340,405(+) acaga(C/T)gcacg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BAIAP3 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
nsv471066 CNV Loss 18288195
nsv428316 CNV Gain+Loss 18775914
dgv2505n71 CNV Loss 21882294
dgv2509n71 CNV Loss 21882294
dgv2525n71 CNV Loss 21882294
nsv904950 CNV Loss 21882294
nsv904954 CNV Loss 21882294
dgv2527n71 CNV Loss 21882294
dgv2528n71 CNV Loss 21882294
dgv2529n71 CNV Loss 21882294
nsv904978 CNV Loss 21882294
esv2750325 CNV Deletion 23290073
esv2750326 CNV Deletion 23290073

Variation tolerance for BAIAP3 Gene

Residual Variation Intolerance Score: 38.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.32; 70.65% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for BAIAP3 Gene

Disorders for BAIAP3 Gene

Relevant External Links for BAIAP3

Genetic Association Database (GAD)
BAIAP3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BAIAP3

No disorders were found for BAIAP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BAIAP3 Gene

Publications for BAIAP3 Gene

  1. Cloning and characterization of BAP3 (BAI-associated protein 3), a C2 domain-containing protein that interacts with BAI1. (PMID: 9790924) Shiratsuchi T. … Nakamura Y. (Biochem. Biophys. Res. Commun. 1998) 2 3 4 23 67
  2. Genetic markers of a Munc13 protein family member, BAIAP3, are gender specifically associated with anxiety and benzodiazepine abuse in mice and humans. (PMID: 23698091) Wojcik S.M. … Ehrenreich H. (Mol. Med. 2013) 3
  3. The LIFEdb database in 2006. (PMID: 16381901) Mehrle A. … Wiemann S. (Nucleic Acids Res. 2006) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  5. From ORFeome to biology: a functional genomics pipeline. (PMID: 15489336) Wiemann S. … Poustka A. (Genome Res. 2004) 3

Products for BAIAP3 Gene

Sources for BAIAP3 Gene

Content