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Aliases for BAIAP2-AS1 Gene

Subcategory (RNA class) for BAIAP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BAIAP2-AS1 Gene

  • BAIAP2 Antisense RNA 1 (Head To Head) 2 3 5
  • BAIAP2 Antisense RNA 1 (Non-Protein Coding) 2
  • BAIAP2 Antisense RNA 1 2

External Ids for BAIAP2-AS1 Gene

Previous GeneCards Identifiers for BAIAP2-AS1 Gene

  • GC17M079012
  • GC17M079016
  • GC17M079020
  • GC17M079024

Summaries for BAIAP2-AS1 Gene

GeneCards Summary for BAIAP2-AS1 Gene

BAIAP2-AS1 (BAIAP2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAIAP2-AS1 Gene

Genomics for BAIAP2-AS1 Gene

Regulatory Elements for BAIAP2-AS1 Gene

Enhancers for BAIAP2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around BAIAP2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for BAIAP2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around BAIAP2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BAIAP2-AS1 Gene

Chromosome:
17
Start:
81,029,130 bp from pter
End:
81,034,881 bp from pter
Size:
5,752 bases
Orientation:
Minus strand

Genomic View for BAIAP2-AS1 Gene

Genes around BAIAP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BAIAP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BAIAP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAIAP2-AS1 Gene

Proteins for BAIAP2-AS1 Gene

Post-translational modifications for BAIAP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BAIAP2-AS1 Gene

Domains & Families for BAIAP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BAIAP2-AS1 Gene

Function for BAIAP2-AS1 Gene

Phenotypes for BAIAP2-AS1 Gene

GenomeRNAi human phenotypes for BAIAP2-AS1:
genes like me logo Genes that share phenotypes with BAIAP2-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BAIAP2-AS1 Gene

Localization for BAIAP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BAIAP2-AS1 Gene

Pathways & Interactions for BAIAP2-AS1 Gene

SuperPathways for BAIAP2-AS1 Gene

No Data Available

Interacting Proteins for BAIAP2-AS1 Gene

Gene Ontology (GO) - Biological Process for BAIAP2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BAIAP2-AS1 Gene

Drugs & Compounds for BAIAP2-AS1 Gene

No Compound Related Data Available

Transcripts for BAIAP2-AS1 Gene

mRNA/cDNA for BAIAP2-AS1 Gene

Unigene Clusters for BAIAP2-AS1 Gene

BAIAP2 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BAIAP2-AS1 Gene

No ASD Table

Relevant External Links for BAIAP2-AS1 Gene

GeneLoc Exon Structure for
BAIAP2-AS1
ECgene alternative splicing isoforms for
BAIAP2-AS1

Expression for BAIAP2-AS1 Gene

mRNA expression in normal human tissues for BAIAP2-AS1 Gene

SOURCE GeneReport for Unigene cluster for BAIAP2-AS1 Gene:

Hs.448889
genes like me logo Genes that share expression patterns with BAIAP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BAIAP2-AS1 Gene

Orthologs for BAIAP2-AS1 Gene

Evolution for BAIAP2-AS1 Gene

ENSEMBL:
Gene Tree for BAIAP2-AS1 (if available)
TreeFam:
Gene Tree for BAIAP2-AS1 (if available)

No data available for Orthologs for BAIAP2-AS1 Gene

Paralogs for BAIAP2-AS1 Gene

No data available for Paralogs for BAIAP2-AS1 Gene

Variants for BAIAP2-AS1 Gene

Sequence variations from dbSNP and Humsavar for BAIAP2-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs4969238 -- 81,031,946(+) CCGGG(C/T)TGCAG nc-transcript-variant
rs4969349 -- 81,032,233(+) CTGGC(A/G)ACGCC nc-transcript-variant
rs7405668 -- 81,032,587(+) CCCCC(A/C)AGCCC nc-transcript-variant
rs11870986 -- 81,033,050(+) CCAGC(C/T)CAGGA nc-transcript-variant
rs11548824 -- 81,031,093(-) GCTCC(C/T)GTGTT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for BAIAP2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv3292n100 CNV gain 25217958
esv26223 CNV gain+loss 19812545
nsv1072760 CNV deletion 25765185
nsv1133415 CNV deletion 24896259
nsv470619 CNV loss 18288195
nsv576169 CNV loss 21841781
nsv828128 CNV loss 20364138
nsv833564 CNV loss 17160897
nsv952388 CNV deletion 24416366

Relevant External Links for BAIAP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BAIAP2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BAIAP2-AS1 Gene

Disorders for BAIAP2-AS1 Gene

Relevant External Links for BAIAP2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BAIAP2-AS1

No disorders were found for BAIAP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BAIAP2-AS1 Gene

Publications for BAIAP2-AS1 Gene

  1. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PMID: 16303743) Otsuki T. … Isogai T. (DNA Res. 2005) 3 65
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for BAIAP2-AS1 Gene

Sources for BAIAP2-AS1 Gene

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