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Aliases & Descriptions for BAIAP2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BAP2 1 , 2 FLAF3 2 , 3 IRS-58 3 IRSP53 2 , 5 IRSp53 3 IRSp53/58 3
Descriptions BAI-associated protein 2 3 BAI1-associated protein 2 2 , 3 Fas ligand-associated factor 3 2 , 3 Insulin receptor substrate p53 2 , 3 Insulin receptor substrate p53/p58 2 , 3 Insulin receptor substrate protein of 53 kDa 3 Protein BAP2 3 brain-specific angiogenesis inhibitor 1-associated protein 2 2
Search outside databases for aliases for BAIAP2 genePrevious GC identifers: GC17U990151 GC17P082371 GC17P079571 GC17P079709
Summaries for BAIAP2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for BAIAP2 : The protein encoded by this gene has been identified as a brain-specific angiogenesis inhibitor(BAI1)-binding protein. This adaptor protein links membrane bound G-proteins to cytoplasmiceffector proteins. This protein functions as an insulin receptor tyrosine kinase substrate andsuggests a role for insulin in the central nervous system. It also associates with a downstreameffector of Rho small G proteins, which is associated with the formation of stress fibers andcytokinesis. This protein is involved in lamellipodia and filopodia formation in motile cells andmay affect neuronal growth-cone guidance. This protein has also been identified as interactingwith the dentatorubral-pallidoluysian atrophy gene, which is associated with an autosomal dominantneurodegenerative disease. Alternative splicing results in multiple transcript variants encodingdistinct isoforms. UniProtKB/Swiss-Prot: BAIP2_HUMAN, Q9UQB8 Function : Adapter protein that links membrane-bound small G-proteins to cytoplasmic effectorproteins. Necessary for CDC42-mediated reorganization of the actin cytoskeleton and forRAC1-mediated membrane ruffling. Involved in the regulation of the actin cytoskeleton by WASFfamily members and the Arp2/3 complex. Plays a role in neurite growth. Acts syngeristically withENAH to promote filipodia formation
Gene Wiki entry for BAIAP2
Genomic Location for BAIAP2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the BAIAP2 gene Entrez Gene cytogenetic band: 17q25 Ensembl cytogenetic band: 17q25.3 HGNC cytogenetic band: 17q25 BAIAP2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17P076623:
(about GC identifiers )
Start:
76,623,546 bp from pter
End:
76,705,827 bp from pter
Size:
82,282 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000017.9 NT_024871.11 Proteins for BAIAP2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: BAIP2_HUMAN, Q9UQB8 (See
protein sequence )Recommended Name: Brain-specific angiogenesis inhibitor 1-associated protein 2 Size : 552 amino acids; 60868 Da
Subunit : Homodimer. Interacts with CDC42 and RAC1 that have been activated by GTP binding.Interacts with ATN1, BAI1, EPS8, SHANK1, SHANK2, SHANK3, WASF1 and WASF2. Interacts with ENAHafter recruitment of CDC42. Interacts with TIAM1 and DIAPH1 (By similarity)
Subcellular location : Cytoplasm. Membrane; Peripheral membrane protein. Cell projection,filopodium. Cell projection, ruffle. Note=Detected throughout the cytoplasm in the absence ofspecific binding partners. Detected in filopodia and close to membrane ruffles
Caution : It is uncertain whether Met-1 or Met-59 is the initiator
PDB structure from and Proteopedia : 1WDZ (3D)
 1Y2O (3D)
 
Secondary accessions : O43858 Q53HB1 Q86WC1 Q8N5C0 Q96CR7 Q9UBR3 Q9UQ43Alternative splicing : 6 isoforms : Q9UQB8-1 Q9UQB8-2 Q9UQB8-3 Q9UQB8-4 Q9UQB8-5 Q9UQB8-6
Post-translational modifications:
Phosphorylated on tyrosine residues by INSR in response to insulin treatment1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_001138360.1 NP_006331.1 NP_059344.1 NP_059345.1 ENSEMBL proteins: ENSP00000316338 ENSP00000376211 ENSP00000313974 ENSP00000315685 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: BAIAP2 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for BAIAP2: Assays for BAIAP2:
Protein
Domains/ Families for BAIAP2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UQB8 ProtoNet protein and cluster: Q9UQB8
3 Blocks protein families : IPB001452 SH3 domain signature IPB011511 Variant SH3 IPB013606 IRSp53/MIM homology domain UniProtKB/Swiss-Prot: BAIP2_HUMAN, Q9UQB8 Domain : The IMD domain forms a coiled coil. The isolated domain can induce actin bundling andfilopodia formation. In the absence of G-proteins intramolecular interaction between the IMD andthe SH3 domain gives rise to an auto-inhibited state of the protein. Interaction of the IMD withRAC1 or CDC42 leads to activation Domain : The SH3 domain interacts with ATN1, BAI1, WASF1, WASF2, SHANK1, DIAPH1 and ENAHSimilarity : Contains 1 IMD (IRSp53/MIM homology) domainSimilarity : Contains 1 SH3 domain
Gene Function for BAIAP2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_001144888 Applied Biosystems Silencer ® siRNAs for BAIAP2 Sigma-Aldrich siRNA and siRNA Panels for BAIAP2 Sigma-Aldrich shRNA for BAIAP2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_017451 UniProtKB/Swiss-Prot: BAIP2_HUMAN, Q9UQB8 Function : Adapter protein that links membrane-bound small G-proteins to cytoplasmic effectorproteins. Necessary for CDC42-mediated reorganization of the actin cytoskeleton and forRAC1-mediated membrane ruffling. Involved in the regulation of the actin cytoskeleton by WASFfamily members and the Arp2/3 complex. Plays a role in neurite growth. Acts syngeristically withENAH to promote filipodia formation
Genatlas biochemistry entry for BAIAP2 :brain specific angiogenesis (BAI1) inhibitor-associated protein 2,expressed in neurons,with twoisoforms,long expressed in brain,short in other tissue,MAGUK (membrane-associted guanylase kinasehomolog) family,homolog of hamster IRSP53
3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Baiap2) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for BAIAP2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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3 Sigma-Aldrich "Your Favorite Gene" Pathways for BAIAP2 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for BAIAP2 5/40 Interacting proteins for BAIAP2 (Q9UQB8 1 , 2 ENSP00000316338 3 ) via UniProtKB, MINT, and/or STRING (see all 40
)Interactant Interaction Details GeneCard External ID(s) WASF2 Q9Y6W5 2 , ENSP00000363131 3 MINT-15179 MINT-15180 MINT-15178 STRING (score=.999 ) ATN1 P54259 2 , ENSP00000349076 3 MINT-2868323 MINT-50907 MINT-50909 STRING (score=.998 ) ABI1 Q8IZP0 1 , ENSP00000347555 3 EBI-525456, EBI-375446 STRING (score=.936 ) EPS8 Q12929 1 , 2 , ENSP00000281172 3 EBI-525456, EBI-375576 MINT-68438 EBI-525456, EBI-375576 MINT-68438 STRING (score=.991 ) PBX2 P40425 1 , 2 EBI-525456, EBI-348489 MINT-62572 MINT-62670 MINT-62746 EBI-525456, EBI-348489 MINT-62572 MINT-62670 MINT-62746
About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for BAIAP2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for BAIAP2 1 Novoseek chemical compound relationship for BAIAP2 gene
About this table
Transcripts for BAIAP2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_001144888 Sigma-Aldrich siRNA and siRNA Panels for BAIAP2 Sigma-Aldrich shRNA for BAIAP2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_006340 NM_017450 NM_017451
REFSEQ mRNAs for BAIAP2 gene (4 alternative transcripts): NM_001144888.1 NM_006340.2 NM_017450.2 NM_017451.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006340 NM_017450 NM_017451
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001144888  
Additional cDNA sequence: AB015019.1 AB015020.1 AB017119.1 AB017120.1 AK023688.1 AK056888.1 AK127291.1 AK222670.1 AK225612.1 AK297644.1 AK298629.1 AK301436.1 BC002495.2 BC014020.2 BC032559.1 U70669.1
24/30 DOTS entries (see all 30
): DT.100885089 DT.106708 DT.92444973 DT.100885084 DT.75168840 DT.95226934 DT.100885080 DT.443448 DT.95226944 DT.75172568 DT.120937425 DT.92444964 DT.95226962 DT.100697561 DT.40246617 DT.97759993 DT.100803282 DT.120937354 DT.95132854 DT.120937357 DT.120937385 DT.40212091 DT.442429 DT.75140322
24/341 AceView cDNA sequences (see all 341
):BG060086 AW299831 AA349114 AI459980 CB111778 BM928074 BQ651827 BM474938 BQ432153 U70669 BQ710494 BE252378 AI611036 BF446922 BQ652839 BC032559 AI093313 BQ941292 AL556018 Z41362 BI824231 BQ428473 BM848150 BQ227723
highest scoring ESTs for BAIAP2 :AB015019 AB015020 AA236944 AA349114 AA513463 AA631876 AA644152 AA854934 AA860146 AA923249
Unigene Cluster for BAIAP2: BAI1-associated protein 2 Hs.128316 [show with all ESTs ] Unigene Representative Sequence: AK127291 GeneLoc Exon Structure 5/23 Alternative Splicing Database (ASD) splice patterns (SP) for BAIAP2 (see all 23
) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b · 14c ^ 15a · 15b · 15c ^ 16 ^ 17 ^ 18 ^ 19a · SP1 :     -   -   -     -   -   -   -     -   -   -     -   -             -   -       SP2 :       -   -     -   -   -   -     -   -   -     -   -     -         -   -       SP3 :     -   -   -     -   -   -   -     -   -   -     -   -             -   -       SP4 :     -   -   -     -   -   -   -     -   -   -     -   -             -   -       SP5 :                                             -   -      
ExUns: 19b · 19c ^ 20a · 20b ^ 21a · 21b ^ 22a · 22b ^ 23 ^ 24a · 24b ^ 25 ^ 26a · 26b SP1 :             -         -         SP2 :             -                 SP3 :             -                 SP4 :             -                 SP5 :             -         -        
About this scheme ECgene alternative splicing isoforms for BAIAP2 4 Ensembl transcripts including schematic representations : ENST00000321300
ENST00000392411
ENST00000321238
ENST00000321280
Expression for BAIAP2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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BAIAP2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for BAIAP2 1 / 2 / 3
10 probe-sets matching BAIAP2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GAGCCTTGGGSOURCE GeneReport for Unigene cluster: Hs.128316 Expression variation in blood from EXPOLDB for BAIAP2
UniProtKB/Swiss-Prot: BAIP2_HUMAN, Q9UQB8 Tissue specificity : Isoform 1 and isoform 4 are expressed almost exclusively in brain. Isoform 4 isbarely detectable in placenta, prostate and testis. A short isoform is ubiquitous, with thehighest expression in liver, prostate, testis and placenta
Orthologs for BAIAP2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for BAIAP2 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for BAIAP2 ENSEMBL Gene Tree for BAIAP2 Paralogs for BAIAP2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for BAIAP2 gene BAIAP2L2 2 BAIAP2L1 2
SNPs/Variants for BAIAP2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for BAIAP2 (up to first 250kb)
Disorders & Mutations for BAIAP2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 605475 3 Novoseek disease relationships for BAIAP2 gene
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Medical News for BAIAP2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for BAIAP2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/52 PubMed articles for BAIAP2 gene (see all 52
): Identification of BAIAP2 (BAI-associated protein 2), a novel human homologue of hamster IRSp53, whose SH3 domain interacts with the cytoplasmic domain of BAI1. (PubMed id 10343108) 1, 2, 3, 4 Oda K.... Tokino T. (1999) A novel actin bundling/filopodium-forming domain conserved in insulin receptor tyrosine kinase substrate p53 and missing in metastasis protein. (PubMed id 14752106) 1, 3, 4 Yamagishi A.... Mochizuki N. (2004) Cdc42 induces filopodia by promoting the formation of an IRSp53:Mena complex. (PubMed id 11696321) 1, 3, 4 Krugmann S....Hall A. (2001) Structural basis of filopodia formation induced by the IRSp53/MIM homology domain of human IRSp53. (PubMed id 15635447) 1, 3, 4 Millard T.H.... Fuetterer K. (2005) Dentatorubral-pallidoluysian atrophy protein interacts through a proline-rich region near polyglutamine with the SH3 domain of an insulin receptor tyrosine kinase substrate. (PubMed id 10332026) 1, 3, 4 Okamura-Oho Y.... Yamada M. (1999) Genomic structure and alternative splicing of the insulin receptor tyrosine kinase substrate of 53-kDa protein. (PubMed id 12884081) 1, 3, 4 Miyahara A.... Yamada M. (2003) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) IRSp53/Eps8 complex is important for positive regulation of Rac and cancer cell motility/invasiveness. (PubMed id 15289329) 3, 4 Funato Y.... Miki H. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The insulin receptor substrate IRSp53 links postsynaptic shank1 to the small G-protein cdc42. (PubMed id 12504591) 3, 4 Soltau M.... Kreienkamp H.-J. (2002)
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Genome Databases showing BAIAP2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing BAIAP2
(According to HUGE )
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Specialized Databases showing BAIAP2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for BAIAP2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for BAIAP2:
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009