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Aliases for BAHCC1 Gene

Aliases for BAHCC1 Gene

  • BAH Domain And Coiled-Coil Containing 1 2 3 5
  • Bromo Adjacent Homology Domain-Containing Protein 2 3 4
  • BAH Domain-Containing Protein 2 3 4
  • BAHD2 3 4
  • BAH And Coiled-Coil Domain-Containing Protein 1 3
  • KIAA1447 4

External Ids for BAHCC1 Gene

Previous GeneCards Identifiers for BAHCC1 Gene

  • GC17P076989
  • GC17P079373
  • GC17P074814

Summaries for BAHCC1 Gene

GeneCards Summary for BAHCC1 Gene

BAHCC1 (BAH Domain And Coiled-Coil Containing 1) is a Protein Coding gene. GO annotations related to this gene include chromatin binding. An important paralog of this gene is TNRC18.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAHCC1 Gene

Genomics for BAHCC1 Gene

Regulatory Elements for BAHCC1 Gene

Enhancers for BAHCC1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F081384 1.6 FANTOM5 ENCODE 3.8 +0.6 640 22.4 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF263 SP3 NFYC MEF2D ENSG00000262877 ENSG00000262049 ENSG00000229947 TSPAN10 TMEM105 ARL16 RFNG CENPX CCDC137 PPP1R27
GH17F081336 1.5 FANTOM5 ENCODE 3 -53.5 -53521 10.8 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 TMEM105 ENSG00000262049 RFNG LINC00482 CEP131 TSPAN10 SLC38A10 HGS ENSG00000265678 ARL16
GH17F081481 1.3 FANTOM5 ENCODE 3 +86.1 86121 1.0 CREB3L1 FOS NFYA NFYC USF2 REST HDAC8 SP1 MBD2 TFDP1 ENSG00000265678 CHMP6 ENSG00000262049 CEP131 GPS1 ARL16 ENSG00000262877 RFNG NPB AATK
GH17F081482 1.4 FANTOM5 ENCODE 1.7 +88.3 88267 2.9 HDGF CREB3L1 ARID4B SIN3A ZNF2 ZNF207 ZNF143 DEK ZNF263 SP3 ACTG1 FSCN2 TSPAN10 NPLOC4 CEP131 AATK BAHCC1 LINC01971 GC17M081518 PIR46680
GH17F081427 0.7 FANTOM5 1.5 +30.4 30406 0.1 ZNF146 YBX1 ZNF670 ZBTB7A ATF2 ZNF155 HIC1 KLF9 MLLT1 SALL1 ENSG00000262049 OGFOD3 ENSG00000265678 HGS TEPSIN BAHCC1 GCGR GC17M081444 MIR4740
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BAHCC1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BAHCC1 Gene

Chromosome:
17
Start:
81,395,464 bp from pter
End:
81,466,332 bp from pter
Size:
70,869 bases
Orientation:
Plus strand

Genomic View for BAHCC1 Gene

Genes around BAHCC1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BAHCC1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BAHCC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAHCC1 Gene

Proteins for BAHCC1 Gene

  • Protein details for BAHCC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P281-BAHC1_HUMAN
    Recommended name:
    BAH and coiled-coil domain-containing protein 1
    Protein Accession:
    Q9P281
    Secondary Accessions:
    • Q5U629

    Protein attributes for BAHCC1 Gene

    Size:
    2608 amino acids
    Molecular mass:
    276932 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BAHCC1 Gene

Post-translational modifications for BAHCC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BAHCC1 Gene

No data available for DME Specific Peptides for BAHCC1 Gene

Domains & Families for BAHCC1 Gene

Protein Domains for BAHCC1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for BAHCC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9P281

UniProtKB/Swiss-Prot:

BAHC1_HUMAN :
  • Contains 1 BAH domain.
Domain:
  • Contains 1 BAH domain.
genes like me logo Genes that share domains with BAHCC1: view

No data available for Gene Families for BAHCC1 Gene

Function for BAHCC1 Gene

Gene Ontology (GO) - Molecular Function for BAHCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000976 transcription regulatory region sequence-specific DNA binding IBA --
GO:0003682 chromatin binding IBA --
genes like me logo Genes that share ontologies with BAHCC1: view
genes like me logo Genes that share phenotypes with BAHCC1: view

Animal Models for BAHCC1 Gene

MGI Knock Outs for BAHCC1:

Animal Model Products

miRNA for BAHCC1 Gene

miRTarBase miRNAs that target BAHCC1

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for BAHCC1 Gene

Localization for BAHCC1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BAHCC1 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for BAHCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000785 chromatin IBA --
GO:0005677 chromatin silencing complex IBA --
genes like me logo Genes that share ontologies with BAHCC1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for BAHCC1 Gene

Pathways & Interactions for BAHCC1 Gene

SuperPathways for BAHCC1 Gene

No Data Available

Interacting Proteins for BAHCC1 Gene

Selected Interacting proteins: Q9P281-BAHC1_HUMAN for BAHCC1 Gene via IID

Gene Ontology (GO) - Biological Process for BAHCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006342 chromatin silencing IBA --
GO:0031507 heterochromatin assembly IBA --
genes like me logo Genes that share ontologies with BAHCC1: view

No data available for Pathways by source and SIGNOR curated interactions for BAHCC1 Gene

Transcripts for BAHCC1 Gene

Unigene Clusters for BAHCC1 Gene

BAH domain and coiled-coil containing 1:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for BAHCC1 Gene

No ASD Table

Relevant External Links for BAHCC1 Gene

GeneLoc Exon Structure for
BAHCC1
ECgene alternative splicing isoforms for
BAHCC1

Expression for BAHCC1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BAHCC1 Gene

Protein differential expression in normal tissues from HIPED for BAHCC1 Gene

This gene is overexpressed in Urine (45.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for BAHCC1 Gene



NURSA nuclear receptor signaling pathways regulating expression of BAHCC1 Gene:

BAHCC1

SOURCE GeneReport for Unigene cluster for BAHCC1 Gene:

Hs.514580
genes like me logo Genes that share expression patterns with BAHCC1: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BAHCC1 Gene

Orthologs for BAHCC1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for BAHCC1 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia BAHCC1 34
  • 84.68 (n)
mouse
(Mus musculus)
Mammalia Bahcc1 34 16
  • 82.26 (n)
rat
(Rattus norvegicus)
Mammalia Bahcc1 34
  • 81.27 (n)
chicken
(Gallus gallus)
Aves BAHCC1 34
  • 73.32 (n)
tropical clawed frog
(Silurana tropicalis)
Amphibia bahcc1 34
  • 60.21 (n)
Str.7251 34
African clawed frog
(Xenopus laevis)
Amphibia Xl.9298 34
zebrafish
(Danio rerio)
Actinopterygii bahcc1 34
  • 54.82 (n)
Species where no ortholog for BAHCC1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BAHCC1 Gene

ENSEMBL:
Gene Tree for BAHCC1 (if available)
TreeFam:
Gene Tree for BAHCC1 (if available)

Paralogs for BAHCC1 Gene

Paralogs for BAHCC1 Gene

(1) SIMAP similar genes for BAHCC1 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with BAHCC1: view

Variants for BAHCC1 Gene

Sequence variations from dbSNP and Humsavar for BAHCC1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs10438819 -- 81,448,360(+) CTCTT(C/T)CGCCC intron-variant
rs10459965 -- 81,394,216(+) GAGAC(A/T)ACAGG upstream-variant-2KB
rs1052441 -- 81,466,086(+) TTTTT(C/T)TGTGT utr-variant-3-prime
rs10631962 -- 81,417,562(+) CCCCC(-/GCC)CCCGC intron-variant
rs10664154 -- 81,401,825(+) CAGCA(-/CT)CTCTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BAHCC1 Gene

Variant ID Type Subtype PubMed ID
nsv954582 CNV deletion 24416366
nsv952389 CNV deletion 24416366
nsv828135 CNV loss 20364138
nsv828134 CNV loss 20364138
nsv828128 CNV loss 20364138
nsv576177 CNV gain 21841781
nsv576176 CNV loss 21841781
nsv576175 CNV loss 21841781
nsv576174 CNV loss 21841781
nsv576173 CNV loss 21841781
nsv472924 CNV novel sequence insertion 20440878
nsv457973 CNV loss 19166990
nsv428351 CNV gain 18775914
nsv2163 CNV insertion 18451855
nsv165 CNV insertion 15895083
nsv1160501 CNV duplication 26073780
nsv1160500 CNV duplication 26073780
nsv1070853 CNV deletion 25765185
nsv1057744 CNV gain 25217958
nsv1056174 CNV gain 25217958
esv7468 CNV loss 19470904
esv2799 CNV loss 18987735
esv2716446 CNV deletion 23290073
esv26223 CNV gain+loss 19812545
esv2604305 CNV loss 19546169
esv1750680 CNV deletion 17803354
esv1551656 CNV deletion 17803354
esv1485304 CNV deletion 17803354
esv1130130 CNV insertion 17803354
esv1007420 CNV insertion 20482838
dgv3295n100 CNV gain 25217958
dgv3294n100 CNV loss 25217958
dgv3293n100 CNV gain+loss 25217958
dgv1830e59 CNV duplication 20981092

Relevant External Links for BAHCC1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BAHCC1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BAHCC1 Gene

Disorders for BAHCC1 Gene

Relevant External Links for BAHCC1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BAHCC1

No disorders were found for BAHCC1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BAHCC1 Gene

Publications for BAHCC1 Gene

  1. Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10819331) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4 64
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  3. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64
  4. Toward a comprehensive characterization of a human cancer cell phosphoproteome. (PMID: 23186163) Zhou H. … Mohammed S. (J. Proteome Res. 2013) 4 64
  5. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64

Products for BAHCC1 Gene

Sources for BAHCC1 Gene

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