Aliases for BAHCC1 Gene
Aliases for BAHCC1 Gene
External Ids for BAHCC1 Gene
- HGNC: 29279
- Entrez Gene: 57597
- Ensembl: ENSG00000266074
- UniProtKB: Q9P281
Previous GeneCards Identifiers for BAHCC1 Gene
- GC17P076989
- GC17P079373
- GC17P074814
Summaries for BAHCC1 Gene
GeneCards Summary for BAHCC1 Gene
BAHCC1 (BAH Domain And Coiled-Coil Containing 1) is a Protein Coding gene. GO annotations related to this gene include chromatin binding. An important paralog of this gene is TNRC18.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAHCC1 Gene
Genomics for BAHCC1 Gene
Regulatory Elements for BAHCC1 Gene
Enhancers for BAHCC1 Gene
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around BAHCC1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for BAHCC1 Gene
- Chromosome:
- 17
- Start:
- 81,395,464 bp from pter
- End:
- 81,466,332 bp from pter
- Size:
- 70,869 bases
- Orientation:
- Plus strand
Genomic View for BAHCC1 Gene
Genes around BAHCC1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q25.3 by Ensembl
- 17q25.3 by Entrez Gene
- 17q25.3 by HGNC
BAHCC1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for BAHCC1 Gene
Proteins for BAHCC1 Gene
-
Protein details for BAHCC1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9P281-BAHC1_HUMAN
- Recommended name:
- BAH and coiled-coil domain-containing protein 1
- Protein Accession:
- Q9P281
- Q5U629
Protein attributes for BAHCC1 Gene
- Size:
- 2608 amino acids
- Molecular mass:
- 276932 Da
- Quaternary structure:
- No Data Available
Protein Expression for BAHCC1 Gene
Post-translational modifications for BAHCC1 Gene
Other Protein References for BAHCC1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for BAHCC1
- Invitrogen Antibodies for BAHCC1
- Search GeneTex for Antibodies for BAHCC1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for BAHCC1
- Origene Custom Protein Services for BAHCC1
- Novus Biologicals proteins for BAHCC1
- Search GeneTex for Proteins for BAHCC1
Assay Products
No data available for DME Specific Peptides for BAHCC1 Gene
Domains & Families for BAHCC1 Gene
Suggested Antigen Peptide Sequences for BAHCC1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for BAHCC1 Gene
Function for BAHCC1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | IBA | -- |
| GO:0003682 | chromatin binding | IBA | -- |
Phenotypes for BAHCC1 Gene
- MGI mutant phenotypes for BAHCC1:
- inferred from 1 alleles
- GenomeRNAi human phenotypes for BAHCC1:
Animal Models for BAHCC1 Gene
- MGI Knock Outs for BAHCC1:
-
- Bahcc1 tm1Mnkm
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for BAHCC1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for BAHCC1 gene
- Search ViGene Biosciences for BAHCC1
CRISPR Products
-
OriGene CRISPR knockouts for BAHCC1
-
Santa Cruz Biotechnology (SCBT) CRISPR for BAHCC1
- GenScript: Design CRISPR guide RNA sequences for BAHCC1
miRNA for BAHCC1 Gene
- miRTarBase miRNAs that target BAHCC1
miRNA Products
- Search ViGene Biosciences for BAHCC1
Inhibitory RNA Products
- Origene shRNA, RNAi, and siRNA products in human, mouse, rat for BAHCC1
- Browse OriGene Inhibitory RNA Products For BAHCC1
- Search ViGene Biosciences for BAHCC1
Clone Products
- VectorBuilder custom plasmid, inducible vectors for BAHCC1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BAHCC1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for BAHCC1
-
ViGene Biosciences adenoviral particle packaged cDNA for BAHCC1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for BAHCC1 gene
- Search ViGene Biosciences for BAHCC1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for BAHCC1 Gene
Localization for BAHCC1 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 2 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000785 | chromatin | IBA | -- |
| GO:0005677 | chromatin silencing complex | IBA | -- |
No data available for Subcellular locations from UniProtKB/Swiss-Prot for BAHCC1 Gene
Pathways & Interactions for BAHCC1 Gene
No Data Available
Interacting Proteins for BAHCC1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006342 | chromatin silencing | IBA | -- |
| GO:0031507 | heterochromatin assembly | IBA | -- |
No data available for Pathways by source and SIGNOR curated interactions for BAHCC1 Gene
Transcripts for BAHCC1 Gene
mRNA/cDNA for BAHCC1 Gene
- (6) REFSEQ mRNAs :
- (7) Additional mRNA sequences :
- (113) Selected AceView cDNA sequences:
- (8) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for BAHCC1 Gene
- BAH domain and coiled-coil containing 1:
- Representative Sequences:
CRISPR Products
-
OriGene CRISPR knockouts for BAHCC1
-
Santa Cruz Biotechnology (SCBT) CRISPR for BAHCC1
- GenScript: Design CRISPR guide RNA sequences for BAHCC1
miRNA Products
- Search ViGene Biosciences for BAHCC1
Inhibitory RNA Products
- Origene shRNA, RNAi, and siRNA products in human, mouse, rat for BAHCC1
- Browse OriGene Inhibitory RNA Products For BAHCC1
- Search ViGene Biosciences for BAHCC1
Clone Products
- VectorBuilder custom plasmid, inducible vectors for BAHCC1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BAHCC1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for BAHCC1 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Brain (Nervous System)
- Neural Tube (Nervous System)
- Bone (Muscoskeletal System)
- NULL (Uncategorized)
-
Spinal Cord (Nervous System)
This gene is overexpressed in Urine (45.3).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for BAHCC1 Gene
NURSA nuclear receptor signaling pathways regulating expression of BAHCC1 Gene:
BAHCC1SOURCE GeneReport for Unigene cluster for BAHCC1 Gene:
Hs.514580Evidence on tissue expression from TISSUES for BAHCC1 Gene
- Pancreas(4.2)
- Nervous system(4.2)
Primer Products
-
OriGene qPCR primer pairs for BAHCC1
No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for BAHCC1 Gene
Orthologs for BAHCC1 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| dog (Canis familiaris) |
Mammalia | BAHCC1 34 |
|
||
| mouse (Mus musculus) |
Mammalia | Bahcc1 34 16 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Bahcc1 34 |
|
||
| chicken (Gallus gallus) |
Aves | BAHCC1 34 |
|
||
| tropical clawed frog (Silurana tropicalis) |
Amphibia | bahcc1 34 |
|
||
| Str.7251 34 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | Xl.9298 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | bahcc1 34 |
|
- Species where no ortholog for BAHCC1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chimpanzee (Pan troglodytes)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for BAHCC1 Gene
(1) SIMAP similar genes for BAHCC1 Gene using alignment to 3 proteins:
Variants for BAHCC1 Gene
| SNP ID | Clin | Chr 17 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000042484 | -- | 81,427,815(+) | CTGCC(A/G)TAACT | intron-variant | |
| rs1000051684 | -- | 81,456,216(+) | GCATC(A/C)ACAGA | intron-variant, upstream-variant-2KB | |
| rs1000150156 | -- | 81,439,474(+) | GTGGG(A/G)TGAGT | intron-variant | |
| rs1000172139 | -- | 81,431,877(+) | GCCAG(G/T)GACTT | intron-variant | |
| rs1000218577 | -- | 81,402,468(+) | ATTTT(C/T)TTGCG | intron-variant, upstream-variant-2KB |
Relevant External Links for BAHCC1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- BAHCC1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BAHCC1 Gene
Disorders for BAHCC1 Gene
Relevant External Links for BAHCC1
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- BAHCC1
No disorders were found for BAHCC1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BAHCC1 Gene
Publications for BAHCC1 Gene
- Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10819331) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4 64
- Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131. (PMID: 26841866) Varier R.A. … Vermeulen M. (J. Biol. Chem. 2016) 3 64
- The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
- A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64
- Toward a comprehensive characterization of a human cancer cell phosphoproteome. (PMID: 23186163) Zhou H. … Mohammed S. (J. Proteome Res. 2013) 4 64
Products for BAHCC1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for BAHCC1
- Origene Custom Protein Services for BAHCC1
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for BAHCC1
- Browse OriGene Inhibitory RNA Products For BAHCC1
- OriGene qPCR primer pairs for BAHCC1
- OriGene CRISPR knockouts for BAHCC1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For BAHCC1
- GenScript: Next-day shipping cDNA ORF clone for BAHCC1 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for BAHCC1
- GenScript Custom Assay Services for BAHCC1
- GenScript Custom overexpressing Cell Line Services for BAHCC1
- GenScript: Design CRISPR guide RNA sequences for BAHCC1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for BAHCC1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals Antibodies for BAHCC1
- Novus Biologicals proteins for BAHCC1
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Invitrogen Antibodies for BAHCC1
- ViGene Biosciences adenoviral particle packaged cDNA for BAHCC1 gene
- ViGene Biosciences lentiviral particle packaged cDNA for BAHCC1 gene
- Search ViGene Biosciences for BAHCC1
- Horizon Cell Lines for BAHCC1
- Cyagen custom Knockout/knockin (KOKI) mouse models for BAHCC1
- VectorBuilder custom plasmid, inducible vectors for BAHCC1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BAHCC1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for BAHCC1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer