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Aliases for BAHCC1 Gene

Aliases for BAHCC1 Gene

  • BAH Domain And Coiled-Coil Containing 1 2 3
  • Bromo Adjacent Homology Domain-Containing Protein 2 3 4
  • BAH Domain-Containing Protein 2 3 4
  • BAHD2 3 4
  • BAH And Coiled-Coil Domain-Containing Protein 1 3
  • KIAA1447 4

External Ids for BAHCC1 Gene

Previous GeneCards Identifiers for BAHCC1 Gene

  • GC17P076989
  • GC17P079373
  • GC17P074814

Summaries for BAHCC1 Gene

GeneCards Summary for BAHCC1 Gene

BAHCC1 (BAH Domain And Coiled-Coil Containing 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAHCC1 Gene

Genomics for BAHCC1 Gene

Regulatory Elements for BAHCC1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for BAHCC1 Gene

Start:
81,395,475 bp from pter
End:
81,466,332 bp from pter
Size:
70,858 bases
Orientation:
Plus strand

Genomic View for BAHCC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BAHCC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAHCC1 Gene

Proteins for BAHCC1 Gene

  • Protein details for BAHCC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P281-BAHC1_HUMAN
    Recommended name:
    BAH and coiled-coil domain-containing protein 1
    Protein Accession:
    Q9P281
    Secondary Accessions:
    • Q5U629

    Protein attributes for BAHCC1 Gene

    Size:
    2608 amino acids
    Molecular mass:
    276932 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BAHCC1 Gene

Proteomics data for BAHCC1 Gene at MOPED

Post-translational modifications for BAHCC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BAHCC1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BAHCC1 Gene

Domains for BAHCC1 Gene

Protein Domains for BAHCC1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for BAHCC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9P281

UniProtKB/Swiss-Prot:

BAHC1_HUMAN :
  • Q9P281
Domain:
  • Contains 1 BAH domain.
genes like me logo Genes that share domains with BAHCC1: view

No data available for Gene Families for BAHCC1 Gene

Function for BAHCC1 Gene

Gene Ontology (GO) - Molecular Function for BAHCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003682 chromatin binding IEA --
genes like me logo Genes that share ontologies with BAHCC1: view

Phenotypes for BAHCC1 Gene

genes like me logo Genes that share phenotypes with BAHCC1: view

Animal Models for BAHCC1 Gene

MGI Knock Outs for BAHCC1:

Animal Model Products

miRNA for BAHCC1 Gene

miRTarBase miRNAs that target BAHCC1

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BAHCC1

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for BAHCC1 Gene

Localization for BAHCC1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BAHCC1 Gene COMPARTMENTS Subcellular localization image for BAHCC1 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for BAHCC1 Gene

Pathways for BAHCC1 Gene

SuperPathways for BAHCC1 Gene

No Data Available

Interacting Proteins for BAHCC1 Gene

Selected Interacting proteins: Q9P281-BAHC1_HUMAN for BAHCC1 Gene via I2D

Symbol External ID(s) Details
CLSTN1
MYC

Gene Ontology (GO) - Biological Process for BAHCC1 Gene

None

No data available for Pathways by source for BAHCC1 Gene

Transcripts for BAHCC1 Gene

Unigene Clusters for BAHCC1 Gene

BAH domain and coiled-coil containing 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BAHCC1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for BAHCC1 Gene

No ASD Table

Relevant External Links for BAHCC1 Gene

GeneLoc Exon Structure for
BAHCC1
ECgene alternative splicing isoforms for
BAHCC1

Expression for BAHCC1 Gene

mRNA expression in normal human tissues for BAHCC1 Gene

Protein differential expression in normal tissues for BAHCC1 Gene

This gene is overexpressed in Urine (45.3).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for BAHCC1 Gene

SOURCE GeneReport for Unigene cluster for BAHCC1 Gene Hs.514580

genes like me logo Genes that share expressions with BAHCC1: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for BAHCC1 Gene

Orthologs for BAHCC1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for BAHCC1 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia BAHCC1 35
  • 84.68 (n)
  • 82.25 (a)
mouse
(Mus musculus)
Mammalia Bahcc1 35
  • 82.26 (n)
  • 82.08 (a)
Bahcc1 16
rat
(Rattus norvegicus)
Mammalia Bahcc1 35
  • 81.27 (n)
  • 80.95 (a)
chicken
(Gallus gallus)
Aves BAHCC1 35
  • 73.32 (n)
  • 68.11 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia bahcc1 35
  • 60.21 (n)
  • 58.86 (a)
Str.7251 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.9298 35
zebrafish
(Danio rerio)
Actinopterygii bahcc1 35
  • 54.82 (n)
  • 48.74 (a)
Species with no ortholog for BAHCC1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BAHCC1 Gene

ENSEMBL:
Gene Tree for BAHCC1 (if available)
TreeFam:
Gene Tree for BAHCC1 (if available)

Paralogs for BAHCC1 Gene

Selected SIMAP similar genes for BAHCC1 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with BAHCC1: view

No data available for Paralogs for BAHCC1 Gene

Variants for BAHCC1 Gene

Sequence variations from dbSNP and Humsavar for BAHCC1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs8746 - 81,462,826(-) AAGAC(A/G)GCACA reference, synonymous-codon
rs14640 -- 81,466,080(+) CCTTT(C/T)TTTTT utr-variant-3-prime
rs730209 -- 81,413,152(+) CCCCA(A/G)CCCCA intron-variant
rs744263 -- 81,413,284(+) GCCCC(A/C)TGCCC intron-variant
rs899286 -- 81,450,374(+) GGCCC(A/G)ACCCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BAHCC1 Gene

Variant ID Type Subtype PubMed ID
esv26223 CNV Gain+Loss 19812545
nsv828128 CNV Loss 20364138
nsv909000 CNV Loss 21882294
dgv3308n71 CNV Loss 21882294
nsv909052 CNV Loss 21882294
nsv428351 CNV Gain 18775914
dgv3318n71 CNV Loss 21882294
dgv3320n71 CNV Loss 21882294
dgv3323n71 CNV Loss 21882294
dgv3324n71 CNV Loss 21882294
dgv3326n71 CNV Loss 21882294
dgv3327n71 CNV Loss 21882294
dgv3328n71 CNV Loss 21882294
dgv3329n71 CNV Loss 21882294
dgv3330n71 CNV Loss 21882294
nsv828134 CNV Loss 20364138
nsv909101 CNV Loss 21882294
nsv909102 CNV Loss 21882294
nsv457973 CNV Loss 19166990
esv1007420 CNV Insertion 20482838
nsv2163 CNV Insertion 18451855
nsv165 CNV Insertion 15895083
esv2799 CNV Deletion 18987735
esv7468 CNV Loss 19470904
esv2716446 CNV Deletion 23290073
esv1130130 CNV Insertion 17803354
esv2604305 CNV Loss 19546169
esv1750680 CNV Deletion 17803354
esv1551656 CNV Deletion 17803354
esv1485304 CNV Deletion 17803354
nsv828135 CNV Loss 20364138
dgv3331n71 CNV Loss 21882294

Relevant External Links for BAHCC1 Gene

HapMap Linkage Disequilibrium report
BAHCC1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BAHCC1 Gene

Disorders for BAHCC1 Gene

No disorders were found for BAHCC1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for BAHCC1 Gene

Publications for BAHCC1 Gene

  1. Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10819331) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4
  2. Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs. (PMID: 12421765) Nakayama M. … Ohara O. (Genome Res. 2002) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3

Products for BAHCC1 Gene

Sources for BAHCC1 Gene

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