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Aliases & Descriptions for BACH1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase , and/or 9 Nature :405,311-319 and CroW21)About This Section
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Aliases BACH-1 1 , 2 HA2303 3 OTTHUMP00000096564 2
Descriptions BTB and CNC homolog 1 3 BTB and CNC homology 1 transcription factor 2 BTB and CNC homology 1, basic leucine zipper transcription factor 1 2 basic region leucine zipper transcriptional regulator BACH1 2 transcription regulator protein 9
Search outside databases for aliases for BACH1 genePrevious GC identifers: GC21P027248 GC21P029591
Summaries for BACH1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for BACH1 : This gene encodes a transcription factor that belongs to the cap'n'collar type of basicregion leucine zipper factor family (CNC-bZip). The encoded protein contains broad complex,tramtrack, bric-a-brac/poxvirus and zinc finger (BTB/POZ) domains, which is atypical of CNC-bZipfamily members. These BTB/POZ domains facilitate protein-protein interactions and formation ofhomo- and/or hetero-oligomers. When this encoded protein forms a heterodimer with MafK, itfunctions as a repressor of Maf recognition element (MARE) and transcription is repressed.Multiple alternatively spliced transcript variants have been identified for this gene. [providedby RefSeq] UniProtKB/Swiss-Prot: BACH1_HUMAN, O14867 Function : Transcriptional regulator that acts as repressor or activator. Binds, in-vitro, to NF-E2binding sites. Play important roles in coordinating transcription activation and repression byMAFK
Gene Wiki entry for BACH1
Genomic Location for BACH1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences , Whole Chromsome Sequence According to
Nature (Cited Here with Permission) :405,311-319 and CroW21)About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 21q22.11 Ensembl cytogenetic band: 21q21.3 HGNC cytogenetic band: 21q22.1 Nature(405: 311-319) cytogenetic band: 21q22.11 BACH1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
GC21P029593:
GeneLoc
Nature :405,311-319
Start:
29,593,091 bp from pter
16,247,722 bp from centromere
End:
29,656,088 bp from pter
16,294,818 bp from centromere
Size:
62,998 bases
47,097 bases
Orientation:
plus strand
plus strand
RefSeq DNA sequence: NC_000021.7 NT_011512.10 Whole chromosome sequencing:
cDNA sequence:
A20292 genomic clones:
P292A20
Proteins for BACH1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: BACH1_HUMAN, O14867 (See
protein sequence )Recommended Name: Transcription regulator protein BACH1 Size : 736 amino acids; 81958 Da
Subcellular location : Nucleus (By similarity)
PDB structures from and Proteopedia : 2IHC (3D)
 
Secondary accessions : O43285
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001011545.1 NP_001177.1 NP_996749.1 ENSEMBL proteins: ENSP00000382805 ENSP00000286800 ENSP00000372296 ENSP00000382802 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): BACH1 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for BACH1: Assays for BACH1:
Protein
Domains/ Families for BACH1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O14867 ProtoNet protein and cluster: O14867
2 Blocks protein families : IPB000210 BTB/POZ domain IPB011616 bZIP transcription factor UniProtKB/Swiss-Prot: BACH1_HUMAN, O14867 Similarity : Belongs to the bZIP family. CNC subfamilySimilarity : Contains 1 BTB (POZ) domainSimilarity : Contains 1 bZIP domain
Gene Function for BACH1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001186 Applied Biosystems Silencer ® siRNAs for BACH1 Sigma-Aldrich siRNA and siRNA Panels for BACH1 Sigma-Aldrich shRNA for BACH1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_206866 UniProtKB/Swiss-Prot: BACH1_HUMAN, O14867 Function : Transcriptional regulator that acts as repressor or activator. Binds, in-vitro, to NF-E2binding sites. Play important roles in coordinating transcription activation and repression byMAFK
Genatlas biochemistry entry for BACH1 :murine Bac-1 transcription factor homolog,ubiquitously expressed,interacting withMAFK,transcription repressor in fibroblasts,activator in cultured erythroid cells
4 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Bach1) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for BACH1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for BACH1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for BACH1 3 Interacting proteins for BACH1 (ENSP00000286800 3 O14867 1 ) via UniProtKB, MINT, and/or STRING About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006355 regulation of transcription, DNA-dependent
IEA --
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Drugs & Compounds for BACH1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for BACH1 5 Novoseek chemical compound relationships for BACH1 gene
About this table
Transcripts for BACH1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001186 Sigma-Aldrich siRNA and siRNA Panels for BACH1 Sigma-Aldrich shRNA for BACH1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001011545 NM_001186 NM_206866
REFSEQ mRNAs for BACH1 gene (3 alternative transcripts): NM_001011545.1 NM_001186.2 NM_206866.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001011545 NM_001186 NM_206866
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001011545  
Additional cDNA sequence: AB002803.1 AF026199.1 AF026200.1 AF317902.1 AF490769.1 AK291021.1 AK313791.1 BC063307.1 BC065252.1 CR450303.1
10 DOTS entries : DT.451634 DT.95266471 DT.97815312 DT.97778939 DT.99997001 DT.100655891 DT.121130529 DT.91758720 DT.92034558 DT.95266469
2 AceView cDNA sequences :AF317902 BF372373
highest scoring ESTs for BACH1 :AB002803 AF317902 AA215456 AA233996 AA252603 AA382183 AA382184 AA399950 AA402241 AA412052
Unigene Cluster for BACH1: BTB and CNC homology 1, basic leucine zipper transcription factor 1 Hs.154276 [show with all ESTs ] Unigene Representative Sequence: NM_206866 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for BACH1 ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b SP1 :       -   -   -   -                   SP2 :         -   -   -                   SP3 :       -   -     -                   SP4 :       -   -                       SP5 :           -   -                  
About this scheme ECgene alternative splicing isoforms for BACH1 4 Ensembl transcripts including schematic representations : ENST00000399921
ENST00000286800
ENST00000382845
ENST00000399919
Expression for BACH1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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BACH1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for BACH1 1 / 2 / 3
7 probe-sets matching BACH1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.154276 Expression variation in blood from EXPOLDB for BACH1
Orthologs for BACH1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for BACH1 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for BACH1 ENSEMBL Gene Tree for BACH1 Paralogs for BACH1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for BACH1 gene BACH2 2
SNPs/Variants for BACH1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for BACH1 (up to first 250kb)
Disorders & Mutations for BACH1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602751 2 Novoseek disease relationships for BACH1 gene
About this table 1 PharmGKB disease relationship for BACH1 gene About this table Genetic Association Database: BACH1 Human Genome Epidemiology Navigator: BACH1 (19 documents)
Medical News for BACH1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for BACH1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/61 PubMed articles for BACH1 gene (see all 61
): Characterization of a human homolog (BACH1) of the mouse Bach1 gene encoding a BTB-basic leucine zipper transcription factor and its mapping to chromosome 21q22.1. (PubMed id 9479503) 1, 2, 3, 4 Ohira M....Ohara O. (1998) Isolation of the human BACH1 transcription regulator gene, which maps to chromosome 21q22.1. (PubMed id 9544839) 1, 2, 3, 4 Blouin J.-L.... Antonarakis S.E. (1998) A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243) 3, 4 Beausoleil S.A.... Gygi S.P. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The DNA sequence of human chromosome 21. (PubMed id 10830953) 3, 4 Hattori M....Yaspo M.L. (2000) Bach1 competes with Nrf2 leading to negative regulation of the antioxidant response element (ARE)-mediated NAD(P)H:quinone oxidoreductase 1 gene expression and induction in response to antioxidants. (PubMed id 15734732) 1, 3 Dhakshinamoorthy S....Jaiswal A.K. (2005) Cadmium induces nuclear export of Bach1, a transcriptional repressor of heme oxygenase-1 gene. (PubMed id 14504288) 1, 3 Suzuki H....Igarashi K. (2003) BACH1 is a specific repressor of HMOX1 that is inactivated by arsenite. (PubMed id 18550526) 1, 3 Reichard J.F....Puga A. (2008) Heme-dependent up-regulation of the alpha-globin gene expression by transcriptional repressor Bach1 in erythroid cells. (PubMed id 15464985) 1, 3 Tahara T....Taketani S. (2004) Heme regulates gene expression by triggering Crm1-dependent nuclear export of Bach1. (PubMed id 15175654) 1, 3 Suzuki H....Igarashi K. (2004)
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Genome Databases showing BACH1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing BACH1
(According to HUGE )
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Specialized Databases showing BACH1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for BACH1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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