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Aliases for BAALC-AS2 Gene

Subcategory (RNA class) for BAALC-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for BAALC-AS2 Gene

  • BAALC Antisense RNA 2 2 3 4 5
  • BAALC Opposite Strand 2 3
  • BAALCOS 3 4
  • C8orf56 3 4
  • Chromosome 8 Open Reading Frame 56 2
  • BAALC Antisense Gene Protein 2 4
  • BAALC Opposite Strand Protein 4

External Ids for BAALC-AS2 Gene

Previous HGNC Symbols for BAALC-AS2 Gene

  • C8orf56

Summaries for BAALC-AS2 Gene

GeneCards Summary for BAALC-AS2 Gene

BAALC-AS2 (BAALC Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAALC-AS2 Gene

Genomics for BAALC-AS2 Gene

Regulatory Elements for BAALC-AS2 Gene

Enhancers for BAALC-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F103176 0.4 FANTOM5 12.5 -35.3 -35331 0.1 BAALC BAALC-AS2 LINC01181 FZD6 BAALC-AS1 AZIN1 ATP6V1C1 MIR3151 PIR39342
GH08F103183 1.7 FANTOM5 Ensembl ENCODE 11.7 -44.1 -44052 4.6 PKNOX1 JUN MAX ZNF175 SMC3 FOS FOSL2 ZNF263 MTA2 BHLHE40 BAALC-AS2 ENSG00000253851 LINC01181 FZD6 DCAF13 ENSG00000266289 BAALC AZIN1 MIR3151 PIR39342
GH08F103498 0.2 ENCODE 11.5 -358.9 -358905 4.2 PKNOX1 SIN3A FEZF1 GLI4 ZNF2 ZNF121 GLIS2 ZNF548 ZNF263 SP3 RIMS2 LOC105375690 SLC25A32 BAALC-AS2 BAALC-AS1 ENSG00000271830
GH08F103119 0.9 Ensembl ENCODE 11.4 +21.5 21504 1.9 SIX4 GATA3 PKNOX1 MAFK NFE2L2 LINC01181 BAALC-AS2 BAALC FZD6 MTCO2P4
GH08F103108 1.3 FANTOM5 Ensembl ENCODE 11.3 +32.4 32369 1.1 RAD51 BHLHE40 FOS BAALC-AS2 ATP6V1C1 KLF10 BAALC LINC01181 MTCO2P4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around BAALC-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for BAALC-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001398255 574 1000 CTCF MAZ SP3 SUZ12 CBX2 ZFHX2 SMARCA4 ZNF366 POLR2A SCRT2

Genomic Location for BAALC-AS2 Gene

103,132,963 bp from pter
103,141,475 bp from pter
8,513 bases
Minus strand

Genomic View for BAALC-AS2 Gene

Genes around BAALC-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BAALC-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BAALC-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAALC-AS2 Gene

Proteins for BAALC-AS2 Gene

  • Protein details for BAALC-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein BAALC-AS2
    Protein Accession:

    Protein attributes for BAALC-AS2 Gene

    105 amino acids
    Molecular mass:
    11579 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BAALC-AS2 Gene

Post-translational modifications for BAALC-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BAALC-AS2 Gene

Domains & Families for BAALC-AS2 Gene

Protein Domains for BAALC-AS2 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BAALC-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BAALC-AS2 Gene

Function for BAALC-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BAALC-AS2 Gene

Localization for BAALC-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BAALC-AS2 Gene

Pathways & Interactions for BAALC-AS2 Gene

SuperPathways for BAALC-AS2 Gene

No Data Available

Interacting Proteins for BAALC-AS2 Gene

Gene Ontology (GO) - Biological Process for BAALC-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for BAALC-AS2 Gene

Transcripts for BAALC-AS2 Gene

mRNA/cDNA for BAALC-AS2 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BAALC-AS2 Gene

No ASD Table

Relevant External Links for BAALC-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BAALC-AS2 Gene

mRNA expression in normal human tissues for BAALC-AS2 Gene

genes like me logo Genes that share expression patterns with BAALC-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BAALC-AS2 Gene

Orthologs for BAALC-AS2 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for BAALC-AS2 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C8orf56 35
  • 98 (a)
Species where no ortholog for BAALC-AS2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BAALC-AS2 Gene

Gene Tree for BAALC-AS2 (if available)
Gene Tree for BAALC-AS2 (if available)

Paralogs for BAALC-AS2 Gene

No data available for Paralogs for BAALC-AS2 Gene

Variants for BAALC-AS2 Gene

Sequence variations from dbSNP and Humsavar for BAALC-AS2 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs112060801 -- 103,142,971(+) TCAGC(C/T)CCAGG intron-variant, upstream-variant-2KB
rs112482932 -- 103,141,927(+) GCAGA(C/G)ATGCA intron-variant, upstream-variant-2KB
rs112937449 -- 103,137,840(+) ACAAT(G/T)TATTA intron-variant
rs112989977 -- 103,138,924(+) CTCCC(C/T)CAGGA intron-variant, upstream-variant-2KB
rs113050704 -- 103,142,675(+) GTGAC(C/T)GGGAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BAALC-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv831413 CNV gain 17160897

Variation tolerance for BAALC-AS2 Gene

Gene Damage Index Score: 1.25; 24.95% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for BAALC-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BAALC-AS2 Gene

Disorders for BAALC-AS2 Gene

Relevant External Links for BAALC-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BAALC-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BAALC-AS2 Gene

Publications for BAALC-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3 64
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64

Products for BAALC-AS2 Gene

Sources for BAALC-AS2 Gene

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