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Aliases for BAALC-AS2 Gene

Subcategory (RNA class) for BAALC-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BAALC-AS2 Gene

  • BAALC Antisense RNA 2 2 3 4
  • BAALC Opposite Strand 2 3
  • BAALCOS 3 4
  • C8orf56 3 4
  • Chromosome 8 Open Reading Frame 56 2
  • BAALC Antisense Gene Protein 2 4
  • BAALC Opposite Strand Protein 4

External Ids for BAALC-AS2 Gene

Previous HGNC Symbols for BAALC-AS2 Gene

  • C8orf56
  • BAALCOS

Summaries for BAALC-AS2 Gene

GeneCards Summary for BAALC-AS2 Gene

BAALC-AS2 (BAALC Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAALC-AS2 Gene

Genomics for BAALC-AS2 Gene

Genomic Location for BAALC-AS2 Gene

Start:
103,132,963 bp from pter
End:
103,141,475 bp from pter
Size:
8,513 bases
Orientation:
Minus strand

Genomic View for BAALC-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BAALC-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAALC-AS2 Gene

No data available for Regulatory Elements for BAALC-AS2 Gene

Proteins for BAALC-AS2 Gene

  • Protein details for BAALC-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C853-BAAS2_HUMAN
    Recommended name:
    Putative uncharacterized protein BAALC-AS2
    Protein Accession:
    P0C853
    Secondary Accessions:

    Protein attributes for BAALC-AS2 Gene

    Size:
    105 amino acids
    Molecular mass:
    11579 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BAALC-AS2 Gene

Proteomics data for BAALC-AS2 Gene at MOPED

Post-translational modifications for BAALC-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BAALC-AS2 Gene

Domains for BAALC-AS2 Gene

Protein Domains for BAALC-AS2 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BAALC-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BAALC-AS2 Gene

Function for BAALC-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BAALC-AS2 Gene

Localization for BAALC-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BAALC-AS2 Gene

Pathways for BAALC-AS2 Gene

SuperPathways for BAALC-AS2 Gene

No Data Available

Interacting Proteins for BAALC-AS2 Gene

Gene Ontology (GO) - Biological Process for BAALC-AS2 Gene

None

No data available for Pathways by source for BAALC-AS2 Gene

Transcripts for BAALC-AS2 Gene

mRNA/cDNA for BAALC-AS2 Gene

(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate BAALC-AS2
    • Block miRNA regulation of BAALC-AS2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for BAALC-AS2

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for BAALC-AS2 Gene

    No ASD Table

    Relevant External Links for BAALC-AS2 Gene

    GeneLoc Exon Structure for
    BAALC-AS2
    ECgene alternative splicing isoforms for
    BAALC-AS2

    Expression for BAALC-AS2 Gene

    mRNA expression in normal human tissues for BAALC-AS2 Gene

    genes like me logo Genes that share expressions with BAALC-AS2: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for BAALC-AS2 Gene

    Orthologs for BAALC-AS2 Gene

    This gene was present in the common ancestor of human and chimp.

    Orthologs for BAALC-AS2 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia C8orf56 36
    • 98 (a)
    OneToOne
    Species with no ortholog for BAALC-AS2:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • mouse (Mus musculus)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for BAALC-AS2 Gene

    ENSEMBL:
    Gene Tree for BAALC-AS2 (if available)
    TreeFam:
    Gene Tree for BAALC-AS2 (if available)

    Paralogs for BAALC-AS2 Gene

    No data available for Paralogs for BAALC-AS2 Gene

    Variants for BAALC-AS2 Gene

    Relevant External Links for BAALC-AS2 Gene

    HapMap Linkage Disequilibrium report
    BAALC-AS2

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for BAALC-AS2 Gene

    Disorders for BAALC-AS2 Gene

    No disorders were found for BAALC-AS2 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for BAALC-AS2 Gene

    Publications for BAALC-AS2 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
    2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
    4. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

    Products for BAALC-AS2 Gene

    Sources for BAALC-AS2 Gene

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