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Aliases for BAALC-AS2 Gene

Subcategory (RNA class) for BAALC-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BAALC-AS2 Gene

  • BAALC Antisense RNA 2 2 3 4
  • BAALC Opposite Strand 2 3
  • BAALCOS 3 4
  • C8orf56 3 4
  • Chromosome 8 Open Reading Frame 56 2
  • BAALC Antisense Gene Protein 2 4
  • BAALC Opposite Strand Protein 4

External Ids for BAALC-AS2 Gene

Previous Symbols for BAALC-AS2 Gene

  • C8orf56
  • BAALCOS

Summaries for BAALC-AS2 Gene

GeneCards Summary for BAALC-AS2 Gene

BAALC-AS2 (BAALC Antisense RNA 2) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAALC-AS2 Gene

Genomics for BAALC-AS2 Gene

Genomic Location for BAALC-AS2 Gene

Start:
103,132,963 bp from pter
End:
103,141,475 bp from pter
Size:
8,513 bases
Orientation:
Minus strand

Genomic View for BAALC-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BAALC-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAALC-AS2 Gene

No data available for Regulatory Elements for BAALC-AS2 Gene

Proteins for BAALC-AS2 Gene

  • Protein details for BAALC-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C853-BAAS2_HUMAN
    Recommended name:
    Putative uncharacterized protein BAALC-AS2
    Protein Accession:
    P0C853
    Secondary Accessions:

    Protein attributes for BAALC-AS2 Gene

    Size:
    105 amino acids
    Molecular mass:
    11579 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BAALC-AS2 Gene

Proteomics data for BAALC-AS2 Gene at MOPED

Post-translational modifications for BAALC-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BAALC-AS2 Gene

Domains for BAALC-AS2 Gene

Protein Domains for BAALC-AS2 Gene

ProtoNet:
genes like me logo Genes that share domains with BAALC-AS2: view

No data available for Gene Families and UniProtKB/Swiss-Prot for BAALC-AS2 Gene

Function for BAALC-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BAALC-AS2 Gene

Localization for BAALC-AS2 Gene

No data available for Gene Ontology (GO) - Cellular Components for BAALC-AS2 Gene

Pathways for BAALC-AS2 Gene

SuperPathways for BAALC-AS2 Gene

No Data Available

Interacting Proteins for BAALC-AS2 Gene

Gene Ontology (GO) - Biological Process for BAALC-AS2 Gene

None

No data available for Pathways by source for BAALC-AS2 Gene

Transcripts for BAALC-AS2 Gene

mRNA/cDNA for BAALC-AS2 Gene

(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BAALC-AS2 Gene

No ASD Table

Relevant External Links for BAALC-AS2 Gene

GeneLoc Exon Structure for
BAALC-AS2
ECgene alternative splicing isoforms for
BAALC-AS2

Expression for BAALC-AS2 Gene

mRNA expression in normal human tissues for BAALC-AS2 Gene

genes like me logo Genes that share expressions with BAALC-AS2: view

Orthologs for BAALC-AS2 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for BAALC-AS2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C8orf56 37
  • 98 (a)
OneToOne
Species with no ortholog for BAALC-AS2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BAALC-AS2 Gene

ENSEMBL:
Gene Tree for BAALC-AS2 (if available)
TreeFam:
Gene Tree for BAALC-AS2 (if available)

Paralogs for BAALC-AS2 Gene

No data available for Paralogs for BAALC-AS2 Gene

Variants for BAALC-AS2 Gene

Relevant External Links for BAALC-AS2 Gene

HapMap Linkage Disequilibrium report
BAALC-AS2

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for BAALC-AS2 Gene

Disorders for BAALC-AS2 Gene

No disorders were found for BAALC-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for BAALC-AS2 Gene

Publications for BAALC-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

Products for BAALC-AS2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate BAALC-AS2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for BAALC-AS2
    • Block miRNA regulation of BAALC-AS2 using miScript Target Protectors

    Sources for BAALC-AS2 Gene

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