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Aliases for BAALC Gene

Aliases for BAALC Gene

  • BAALC, MAP3K1 And KLF4 Binding 2 3 5
  • Brain And Acute Leukemia, Cytoplasmic 2
  • BAALC, MEKK1 And KLF4 Binding 2

External Ids for BAALC Gene

Previous GeneCards Identifiers for BAALC Gene

  • GC08P103158
  • GC08P104221
  • GC08P103821
  • GC08P104109
  • GC08P104222
  • GC08P104152
  • GC08P099353

Summaries for BAALC Gene

Entrez Gene Summary for BAALC Gene

  • This gene was identified by gene expression studies in patients with acute myeloid leukemia (AML). The gene is conserved among mammals and is not found in lower organisms. Tissues that express this gene develop from the neuroectoderm. Multiple alternatively spliced transcript variants that encode different proteins have been described for this gene; however, some of the transcript variants are found only in AML cell lines. [provided by RefSeq, Jul 2008]

GeneCards Summary for BAALC Gene

BAALC (BAALC, MAP3K1 And KLF4 Binding) is a Protein Coding gene. Diseases associated with BAALC include Acute Leukemia and Leukemia.

UniProtKB/Swiss-Prot for BAALC Gene

  • May play a synaptic role at the postsynaptic lipid rafts possibly through interaction with CAMK2A.

Additional gene information for BAALC Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BAALC Gene

Genomics for BAALC Gene

Regulatory Elements for BAALC Gene

Enhancers for BAALC Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H103207 1.1 Ensembl ENCODE 11.2 +68.3 68271 3.2 PKNOX1 BMI1 DNMT3B RAD21 SCRT2 FOS CEBPB ZEB2 ZNF518A ATF4 ENSG00000253851 BAALC BAALC-AS2 LINC01181 FZD6 PIR39342 MIR3151
GH08H103119 0.8 ENCODE dbSUPER 11.3 -20.5 -20486 1.5 SIX4 PKNOX1 GATA3 RNF2 LINC01181 BAALC-AS2 BAALC FZD6 MTCO2P4
GH08H103176 0.5 FANTOM5 dbSUPER 16.8 +36.1 36113 0.1 BAALC BAALC-AS2 LINC01181 BAALC-AS1 FZD6 AZIN1 ATP6V1C1 MIR3151 PIR39342
GH08H103210 0.7 ENCODE 11.2 +69.9 69935 0.2 SMARCE1 PKNOX1 RFX1 KLF4 DPF2 BMI1 FOXA1 E2F1 GATA3 FOS BAALC BAALC-AS2 LINC01181 PIR39342 MIR3151
GH08H103183 1.6 FANTOM5 Ensembl ENCODE dbSUPER 4.5 +44.8 44834 4.6 PKNOX1 JUN ZNF175 MAX FOSL1 POLR2A FOSL2 FOS RCOR1 TSHZ1 BAALC-AS2 ENSG00000253851 LINC01181 FZD6 DCAF13 ENSG00000266289 BAALC AZIN1 MIR3151 PIR39342
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BAALC on UCSC Golden Path with GeneCards custom track

Promoters for BAALC Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000228312 207 601 SMARCE1 MAZ SP3 ZNF398 ZNF366 POLR2A SCRT2 ZNF524 EZH2

Transcription factor binding sites by QIAGEN in the BAALC gene promoter:

Genomic Locations for BAALC Gene

Genomic Locations for BAALC Gene
89,613 bases
Plus strand

Genomic View for BAALC Gene

Genes around BAALC on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BAALC Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BAALC Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BAALC Gene

Proteins for BAALC Gene

  • Protein details for BAALC Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Brain and acute leukemia cytoplasmic protein
    Protein Accession:
    Secondary Accessions:
    • Q8WTP6
    • Q8WXS0
    • Q8WXS1
    • Q8WXS2
    • Q9HA93

    Protein attributes for BAALC Gene

    180 amino acids
    Molecular mass:
    19224 Da
    Quaternary structure:
    • Interacts with CAMK2A.

    Alternative splice isoforms for BAALC Gene

neXtProt entry for BAALC Gene

Post-translational modifications for BAALC Gene

  • Palmitoylation and myristoylation target the protein to the lipid rafts.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BAALC Gene

No data available for DME Specific Peptides for BAALC Gene

Domains & Families for BAALC Gene

Gene Families for BAALC Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for BAALC Gene


Suggested Antigen Peptide Sequences for BAALC Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BAALC: view

No data available for UniProtKB/Swiss-Prot for BAALC Gene

Function for BAALC Gene

Molecular function for BAALC Gene

UniProtKB/Swiss-Prot Function:
May play a synaptic role at the postsynaptic lipid rafts possibly through interaction with CAMK2A.

Phenotypes From GWAS Catalog for BAALC Gene

Phenotypes for BAALC Gene

GenomeRNAi human phenotypes for BAALC:
genes like me logo Genes that share phenotypes with BAALC: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BAALC Gene

Localization for BAALC Gene

Subcellular locations from UniProtKB/Swiss-Prot for BAALC Gene

Cytoplasm. Cell junction, synapse, synaptosome. Membrane raft. Cell junction, synapse, postsynaptic cell membrane, postsynaptic density. Note=In neurons, localizes to postsynaptic lipid rafts (By similarity). In myocardial and skeletal muscle cells, localizes to the cytoplasm adjacent to the inner cell membrane, polarized to one end of the myocyte (By similarity). {ECO:0000250 UniProtKB:Q8VHV1, ECO:0000250 UniProtKB:Q920K5}.

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BAALC gene
Compartment Confidence
nucleus 5
cytosol 5
plasma membrane 3
extracellular 1
mitochondrion 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Nucleus (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for BAALC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005737 cytoplasm IDA 11707601
GO:0005829 cytosol IDA --
GO:0005886 plasma membrane IEA --
GO:0014069 postsynaptic density IEA --
genes like me logo Genes that share ontologies with BAALC: view

Pathways & Interactions for BAALC Gene

SuperPathways for BAALC Gene

No Data Available

Interacting Proteins for BAALC Gene

Gene Ontology (GO) - Biological Process for BAALC Gene


No data available for Pathways by source and SIGNOR curated interactions for BAALC Gene

Drugs & Compounds for BAALC Gene

No Compound Related Data Available

Transcripts for BAALC Gene

Unigene Clusters for BAALC Gene

Brain and acute leukemia, cytoplasmic:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BAALC Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c
SP1: - - - -
SP2: -
SP3: - -
SP4: - -

Relevant External Links for BAALC Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BAALC Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BAALC Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for BAALC Gene

This gene is overexpressed in Brain - Cortex (x5.1), Brain - Putamen (basal ganglia) (x5.1), Brain - Frontal Cortex (BA9) (x5.0), Brain - Anterior cingulate cortex (BA24) (x4.8), Brain - Caudate (basal ganglia) (x4.7), Brain - Amygdala (x4.4), Brain - Hippocampus (x4.2), and Brain - Substantia nigra (x4.0).

Protein differential expression in normal tissues from HIPED for BAALC Gene

This gene is overexpressed in Frontal cortex (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for BAALC Gene

Protein tissue co-expression partners for BAALC Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of BAALC Gene:


SOURCE GeneReport for Unigene cluster for BAALC Gene:


mRNA Expression by UniProt/SwissProt for BAALC Gene:

Tissue specificity: Predominantly expressed in neuroectoderm-derived tissues. Expressed in the brain and spinal cord, and at low levels, in the adrenal gland. In the bone marrow, confined to the CD34+ progenitor cells. Not found in peripheral blood mononuclear cells, nor lymph nodes. Tends to be expressed at high levels in acute myeloid leukemia and glioblastoma cells.

Evidence on tissue expression from TISSUES for BAALC Gene

  • Nervous system(5)
genes like me logo Genes that share expression patterns with BAALC: view

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for BAALC Gene

Orthologs for BAALC Gene

This gene was present in the common ancestor of chordates.

Orthologs for BAALC Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia BAALC 33 34
  • 96.4 (n)
(Bos Taurus)
Mammalia BAALC 33 34
  • 90.57 (n)
(Canis familiaris)
Mammalia BAALC 33 34
  • 90.57 (n)
(Rattus norvegicus)
Mammalia Baalc 33
  • 87.13 (n)
(Mus musculus)
Mammalia Baalc 33 16 34
  • 86.44 (n)
(Monodelphis domestica)
Mammalia BAALC 34
  • 63 (a)
(Gallus gallus)
Aves BAALC 33 34
  • 66.18 (n)
tropical clawed frog
(Silurana tropicalis)
Amphibia baalc 33
  • 57.58 (n)
(Danio rerio)
Actinopterygii BAALC 34
  • 32 (a)
Species where no ortholog for BAALC was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BAALC Gene

Gene Tree for BAALC (if available)
Gene Tree for BAALC (if available)

Paralogs for BAALC Gene

No data available for Paralogs for BAALC Gene

Variants for BAALC Gene

Sequence variations from dbSNP and Humsavar for BAALC Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000065587 -- 103,167,687(+) TTGGA(G/T)GACAG intron-variant
rs1000069622 -- 103,210,364(+) TTTCT(A/G)TCCCA intron-variant
rs1000074546 -- 103,175,406(+) AACTG(C/T)TTTAT intron-variant
rs1000155386 -- 103,150,302(+) ACACA(C/G)CCAAA intron-variant
rs1000181788 -- 103,149,405(+) ACAGT(C/T)TTTAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BAALC Gene

Variant ID Type Subtype PubMed ID
esv21700 CNV gain 19812545
esv2678140 CNV deletion 23128226
nsv1017326 CNV gain 25217958
nsv831413 CNV gain 17160897

Variation tolerance for BAALC Gene

Residual Variation Intolerance Score: 83.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.93; 49.10% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for BAALC Gene

Human Gene Mutation Database (HGMD)
SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BAALC Gene

Disorders for BAALC Gene

MalaCards: The human disease database

(4) MalaCards diseases for BAALC Gene - From: HGMD, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
acute leukemia
  • stem cell leukaemia
myeloid leukemia
  • leukemia myelogenous
leukemia, acute myeloid
  • leukemia, acute myeloid, somatic
- elite association - COSMIC cancer census association via MalaCards
Search BAALC in MalaCards View complete list of genes associated with diseases

Relevant External Links for BAALC

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with BAALC: view

No data available for UniProtKB/Swiss-Prot and Genatlas for BAALC Gene

Publications for BAALC Gene

  1. BAALC, the human member of a novel mammalian neuroectoderm gene lineage, is implicated in hematopoiesis and acute leukemia. (PMID: 11707601) Tanner SM … de La Chapelle A (Proceedings of the National Academy of Sciences of the United States of America 2001) 2 3 4 60
  2. BAALC potentiates oncogenic ERK pathway through interactions with MEKK1 and KLF4. (PMID: 26050649) Morita K … Kurokawa M (Leukemia 2015) 2 3 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  5. Evaluation of rs62527607 [GT] single nucleotide polymorphism located in BAALC gene in children with acute leukemia using mismatch PCR-RFLP. (PMID: 27372260) Nadimi M … Mesrian Tanha H (Cancer genetics 2016) 3 60

Products for BAALC Gene

Sources for BAALC Gene

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