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Aliases for B4GALT1-AS1 Gene

Subcategory (RNA class) for B4GALT1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for B4GALT1-AS1 Gene

  • B4GALT1 Antisense RNA 1 2 3 5

External Ids for B4GALT1-AS1 Gene

Summaries for B4GALT1-AS1 Gene

GeneCards Summary for B4GALT1-AS1 Gene

B4GALT1-AS1 (B4GALT1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for B4GALT1-AS1 Gene

Genomics for B4GALT1-AS1 Gene

Regulatory Elements for B4GALT1-AS1 Gene

Enhancers for B4GALT1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around B4GALT1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for B4GALT1-AS1 Gene

Chromosome:
9
Start:
33,166,948 bp from pter
End:
33,179,983 bp from pter
Size:
13,036 bases
Orientation:
Plus strand

Genomic View for B4GALT1-AS1 Gene

Genes around B4GALT1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
B4GALT1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for B4GALT1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for B4GALT1-AS1 Gene

Proteins for B4GALT1-AS1 Gene

Post-translational modifications for B4GALT1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for B4GALT1-AS1 Gene

Domains & Families for B4GALT1-AS1 Gene

Gene Families for B4GALT1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with B4GALT1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for B4GALT1-AS1 Gene

Function for B4GALT1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for B4GALT1-AS1 Gene

Localization for B4GALT1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for B4GALT1-AS1 Gene

Pathways & Interactions for B4GALT1-AS1 Gene

SuperPathways for B4GALT1-AS1 Gene

No Data Available

Interacting Proteins for B4GALT1-AS1 Gene

Gene Ontology (GO) - Biological Process for B4GALT1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for B4GALT1-AS1 Gene

Drugs & Compounds for B4GALT1-AS1 Gene

No Compound Related Data Available

Transcripts for B4GALT1-AS1 Gene

mRNA/cDNA for B4GALT1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for B4GALT1-AS1 Gene

No ASD Table

Relevant External Links for B4GALT1-AS1 Gene

GeneLoc Exon Structure for
B4GALT1-AS1
ECgene alternative splicing isoforms for
B4GALT1-AS1

Expression for B4GALT1-AS1 Gene

mRNA expression in normal human tissues for B4GALT1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for B4GALT1-AS1 Gene

This gene is overexpressed in Testis (x7.9).
genes like me logo Genes that share expression patterns with B4GALT1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for B4GALT1-AS1 Gene

Orthologs for B4GALT1-AS1 Gene

Evolution for B4GALT1-AS1 Gene

ENSEMBL:
Gene Tree for B4GALT1-AS1 (if available)
TreeFam:
Gene Tree for B4GALT1-AS1 (if available)

No data available for Orthologs for B4GALT1-AS1 Gene

Paralogs for B4GALT1-AS1 Gene

No data available for Paralogs for B4GALT1-AS1 Gene

Variants for B4GALT1-AS1 Gene

Sequence variations from dbSNP and Humsavar for B4GALT1-AS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs874200 -- 33,176,736(+) CTGCC(C/T)ATCAG intron-variant
rs874201 -- 33,176,741(+) catca(G/T)gtact intron-variant
rs874202 -- 33,177,055(+) GTATA(C/T)AATGC intron-variant
rs943930 -- 33,176,649(+) AGCTA(A/G)ACATT intron-variant
rs7847901 -- 33,173,417(+) aaagc(A/C)aaaaa intron-variant

Relevant External Links for B4GALT1-AS1 Gene

HapMap Linkage Disequilibrium report
B4GALT1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for B4GALT1-AS1 Gene

Disorders for B4GALT1-AS1 Gene

Relevant External Links for B4GALT1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
B4GALT1-AS1

No disorders were found for B4GALT1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for B4GALT1-AS1 Gene

Publications for B4GALT1-AS1 Gene

  1. Multifaceted roles of 5'-regulatory region of the cancer associated gene B4GALT1 and its comparison with the gene family. (PMID: 26315939) Al-Obaide M.A. … Srivenugopal K.S. (Int. J. Oncol. 2015) 2 3 67
  2. Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. (PMID: 23263486) KAPttgen A. … Gieger C. (Nat. Genet. 2013) 3
  3. Fine expression profiling of full-length transcripts using a size- unbiased cDNA library prepared with the vector-capping method. (PMID: 18487259) Oshikawa M. … Kato S. (DNA Res. 2008) 3

Products for B4GALT1-AS1 Gene

Sources for B4GALT1-AS1 Gene

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