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Aliases for B4GALNT2P1 Gene

Aliases for B4GALNT2P1 Gene

  • Beta-1,4-N-Acetyl-Galactosaminyltransferase 2 Pseudogene 1 2 3 5

External Ids for B4GALNT2P1 Gene

Summaries for B4GALNT2P1 Gene

GeneCards Summary for B4GALNT2P1 Gene

B4GALNT2P1 (Beta-1,4-N-Acetyl-Galactosaminyltransferase 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for B4GALNT2P1 Gene

Genomics for B4GALNT2P1 Gene

Regulatory Elements for B4GALNT2P1 Gene

Enhancers for B4GALNT2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G049100 1.2 Ensembl ENCODE 0.4 +16.1 16066 2.2 HDAC1 PKNOX1 NFIB ZSCAN4 ZNF133 SIN3A YBX1 BMI1 RAD21 GATA2 B4GALNT2 B4GALNT2P1
GH17G049068 1 ENCODE 0.4 -16.5 -16546 1.7 FOXA2 ATF1 ARID4B DMAP1 ZNF48 SLC30A9 FOS NFYC PPARG KAT8 ATP5G1 SNF8 GC17P049052 B4GALNT2P1
GH17G049106 1.3 Ensembl ENCODE 0.3 +22.1 22111 3.0 FOXA2 ATF1 MLX ARNT ARID4B SIN3A DMAP1 ZNF48 TCF12 SLC30A9 B4GALNT2 ENSG00000238804 ABI3 GNGT2 B4GALNT2P1
GH17G049076 0.9 ENCODE 0.4 -8.3 -8325 1.3 ATF1 TCF12 ZNF766 ELK1 GATA2 FOS KLF13 CAVIN1 ZNF592 MEF2D HOXB13 B4GALNT2P1 GC17P049052
GH17G049109 1.1 ENCODE 0.3 +25.8 25789 2.7 HDGF PKNOX1 CREB3L1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 B4GALNT2 ABI3 GNGT2 ENSG00000238804 B4GALNT2P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around B4GALNT2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for B4GALNT2P1 Gene

Chromosome:
17
Start:
49,085,511 bp from pter
End:
49,086,702 bp from pter
Size:
1,192 bases
Orientation:
Plus strand

Genomic View for B4GALNT2P1 Gene

Genes around B4GALNT2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
B4GALNT2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for B4GALNT2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for B4GALNT2P1 Gene

Proteins for B4GALNT2P1 Gene

Post-translational modifications for B4GALNT2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for B4GALNT2P1 Gene

Domains & Families for B4GALNT2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for B4GALNT2P1 Gene

Function for B4GALNT2P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for B4GALNT2P1 Gene

Localization for B4GALNT2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for B4GALNT2P1 Gene

Pathways & Interactions for B4GALNT2P1 Gene

SuperPathways for B4GALNT2P1 Gene

No Data Available

Interacting Proteins for B4GALNT2P1 Gene

Gene Ontology (GO) - Biological Process for B4GALNT2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for B4GALNT2P1 Gene

Drugs & Compounds for B4GALNT2P1 Gene

No Compound Related Data Available

Transcripts for B4GALNT2P1 Gene

mRNA/cDNA for B4GALNT2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for B4GALNT2P1 Gene

No ASD Table

Relevant External Links for B4GALNT2P1 Gene

GeneLoc Exon Structure for
B4GALNT2P1
ECgene alternative splicing isoforms for
B4GALNT2P1

Expression for B4GALNT2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for B4GALNT2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of B4GALNT2P1 Gene:

B4GALNT2P1
genes like me logo Genes that share expression patterns with B4GALNT2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for B4GALNT2P1 Gene

Orthologs for B4GALNT2P1 Gene

Evolution for B4GALNT2P1 Gene

ENSEMBL:
Gene Tree for B4GALNT2P1 (if available)
TreeFam:
Gene Tree for B4GALNT2P1 (if available)

No data available for Orthologs for B4GALNT2P1 Gene

Paralogs for B4GALNT2P1 Gene

No data available for Paralogs for B4GALNT2P1 Gene

Variants for B4GALNT2P1 Gene

Relevant External Links for B4GALNT2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
B4GALNT2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for B4GALNT2P1 Gene

Disorders for B4GALNT2P1 Gene

No disorders were found for B4GALNT2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for B4GALNT2P1 Gene

Publications for B4GALNT2P1 Gene

No publications were found for B4GALNT2P1 Gene.

Products for B4GALNT2P1 Gene

Sources for B4GALNT2P1 Gene

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