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Aliases for B3GNTL1P1 Gene

Subcategory (RNA class) for B3GNTL1P1 Gene

lncRNA

Aliases for B3GNTL1P1 Gene

  • UDP-GlcNAc:BetaGal Beta-1,3-N-Acetylglucosaminyltransferase-Like 1 Pseudogene 1 2 3 5

External Ids for B3GNTL1P1 Gene

ORGUL Members for B3GNTL1P1 Gene

Summaries for B3GNTL1P1 Gene

GeneCards Summary for B3GNTL1P1 Gene

B3GNTL1P1 (UDP-GlcNAc:BetaGal Beta-1,3-N-Acetylglucosaminyltransferase-Like 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for B3GNTL1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for B3GNTL1P1 Gene

Genomics for B3GNTL1P1 Gene

GeneHancer (GH) Regulatory Elements for B3GNTL1P1 Gene

Promoters and enhancers for B3GNTL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I053287 Enhancer 0.3 ENCODE 4.7 +399.1 399135 1.9 ZNF26 B3GNTL1P1 LOC257396 LOC105378965 RPL13AP13
GH05I052797 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.2 -88.2 -88161 7.9 HDGF CLOCK MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ITGA1 PIR48652 PELO B3GNTL1P1
GH05I052894 Enhancer 0.8 Ensembl ENCODE 0.4 +6.2 6213 3.2 CTCF HLF REST ATF2 NR2F2 ZNF335 ATF7 RCOR1 CHD2 ITGA1 B3GNTL1P1 RPL17P21
GH05I052870 Enhancer 0.8 Ensembl ENCODE 0.4 -19.0 -18978 1.1 ZNF3 RXRA MAX NR2F2 SKI POLR2A BCL6 TRIM28 B3GNTL1P1 PIR48652 ITGA1
GH05I052863 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -25.3 -25315 2.1 FOXA2 TEAD1 HLF CEBPB CEBPG ETS1 NFIL3 PRDM6 LCORL CEBPA B3GNTL1P1 PIR48652 ITGA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around B3GNTL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for B3GNTL1P1 Gene

Genomic Locations for B3GNTL1P1 Gene
chr5:52,889,666-52,889,954
(GRCh38/hg38)
Size:
289 bases
Orientation:
Plus strand
chr5:52,185,498-52,185,786
(GRCh37/hg19)

Genomic View for B3GNTL1P1 Gene

Genes around B3GNTL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
B3GNTL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for B3GNTL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for B3GNTL1P1 Gene

Proteins for B3GNTL1P1 Gene

Post-translational modifications for B3GNTL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for B3GNTL1P1 Gene

Domains & Families for B3GNTL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for B3GNTL1P1 Gene

Function for B3GNTL1P1 Gene

Phenotypes From GWAS Catalog for B3GNTL1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for B3GNTL1P1 Gene

Localization for B3GNTL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for B3GNTL1P1 Gene

Pathways & Interactions for B3GNTL1P1 Gene

SuperPathways for B3GNTL1P1 Gene

No Data Available

Interacting Proteins for B3GNTL1P1 Gene

Gene Ontology (GO) - Biological Process for B3GNTL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for B3GNTL1P1 Gene

Drugs & Compounds for B3GNTL1P1 Gene

No Compound Related Data Available

Transcripts for B3GNTL1P1 Gene

mRNA/cDNA for B3GNTL1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for B3GNTL1P1 Gene

No ASD Table

Relevant External Links for B3GNTL1P1 Gene

GeneLoc Exon Structure for
B3GNTL1P1
ECgene alternative splicing isoforms for
B3GNTL1P1

Expression for B3GNTL1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for B3GNTL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of B3GNTL1P1 Gene:

B3GNTL1P1
genes like me logo Genes that share expression patterns with B3GNTL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for B3GNTL1P1 Gene

Orthologs for B3GNTL1P1 Gene

Evolution for B3GNTL1P1 Gene

ENSEMBL:
Gene Tree for B3GNTL1P1 (if available)
TreeFam:
Gene Tree for B3GNTL1P1 (if available)

No data available for Orthologs for B3GNTL1P1 Gene

Paralogs for B3GNTL1P1 Gene

No data available for Paralogs for B3GNTL1P1 Gene

Variants for B3GNTL1P1 Gene

Additional Variant Information for B3GNTL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
B3GNTL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for B3GNTL1P1 Gene

Disorders for B3GNTL1P1 Gene

No disorders were found for B3GNTL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for B3GNTL1P1 Gene

Publications for B3GNTL1P1 Gene

No publications were found for B3GNTL1P1 Gene.

Products for B3GNTL1P1 Gene

Sources for B3GNTL1P1 Gene

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