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Aliases for AZIN1-AS1 Gene

Subcategory (RNA class) for AZIN1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for AZIN1-AS1 Gene

  • AZIN1 Antisense RNA 1 2 3 5

External Ids for AZIN1-AS1 Gene

Summaries for AZIN1-AS1 Gene

GeneCards Summary for AZIN1-AS1 Gene

AZIN1-AS1 (AZIN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for AZIN1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AZIN1-AS1 Gene

Genomics for AZIN1-AS1 Gene

GeneHancer (GH) Regulatory Elements for AZIN1-AS1 Gene

Promoters and enhancers for AZIN1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I102861 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 562.2 -0.3 -300 5.2 CLOCK FEZF1 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC PPARGC1A ZNF610 AZIN1-AS1 PIR36968 AZIN1 UBR5 ENSG00000272037 GASAL1 ENSG00000253385
GH08I102886 Enhancer 1.2 Ensembl ENCODE dbSUPER 23.4 +22.8 22795 1.6 HDGF MAX EBF1 BATF IRF4 RELA POLR2A NFATC1 ZNF207 ATF7 GC08M102884 AZIN1-AS1 NPM1P52 ATP6V1C1 ENSG00000254236 ENSG00000253263 AZIN1
GH08I102908 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 20.9 +45.8 45847 2.6 CTCF JUN MAX CEBPB CEBPG ETS1 SP1 GATA3 JUND POLR2A AZIN1-AS1 NPM1P52 ATP6V1C1 ENSG00000254236 AZIN1 RPL5P24 GC08P102894
GH08I102902 Enhancer 1.1 Ensembl ENCODE dbSUPER 21.5 +39.4 39354 1.6 FOXA2 MAX RAD21 YY1 GATA3 SCRT2 HNF4G NR2F6 IKZF2 RUNX3 AZIN1-AS1 NPM1P52 ATP6V1C1 ENSG00000254236 GC08P102894 RPL5P24
GH08I102924 Enhancer 1.1 Ensembl ENCODE 18.7 +61.1 61133 2.6 FOXA2 ARNT YY1 ZNF766 ZNF143 ATF7 FOS RUNX3 ZNF592 MAFF RPL5P24 AZIN1-AS1 AZIN1 ENSG00000253263 NPM1P52 ATP6V1C1 ENSG00000254236 ENSG00000201216
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AZIN1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AZIN1-AS1 Gene

Genomic Locations for AZIN1-AS1 Gene
chr8:102,864,271-102,977,876
(GRCh38/hg38)
Size:
113,606 bases
Orientation:
Plus strand

Genomic View for AZIN1-AS1 Gene

Genes around AZIN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AZIN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AZIN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AZIN1-AS1 Gene

Proteins for AZIN1-AS1 Gene

Post-translational modifications for AZIN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AZIN1-AS1 Gene

Domains & Families for AZIN1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AZIN1-AS1 Gene

Function for AZIN1-AS1 Gene

Phenotypes From GWAS Catalog for AZIN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AZIN1-AS1 Gene

Localization for AZIN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AZIN1-AS1 Gene

Pathways & Interactions for AZIN1-AS1 Gene

SuperPathways for AZIN1-AS1 Gene

No Data Available

Interacting Proteins for AZIN1-AS1 Gene

Gene Ontology (GO) - Biological Process for AZIN1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AZIN1-AS1 Gene

Drugs & Compounds for AZIN1-AS1 Gene

No Compound Related Data Available

Transcripts for AZIN1-AS1 Gene

mRNA/cDNA for AZIN1-AS1 Gene

(16) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AZIN1-AS1 Gene

No ASD Table

Relevant External Links for AZIN1-AS1 Gene

GeneLoc Exon Structure for
AZIN1-AS1
ECgene alternative splicing isoforms for
AZIN1-AS1

Expression for AZIN1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AZIN1-AS1 Gene

genes like me logo Genes that share expression patterns with AZIN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AZIN1-AS1 Gene

Orthologs for AZIN1-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for AZIN1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 99 (a)
OneToOne
Species where no ortholog for AZIN1-AS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for AZIN1-AS1 Gene

ENSEMBL:
Gene Tree for AZIN1-AS1 (if available)
TreeFam:
Gene Tree for AZIN1-AS1 (if available)

Paralogs for AZIN1-AS1 Gene

No data available for Paralogs for AZIN1-AS1 Gene

Variants for AZIN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for AZIN1-AS1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000007991 -- 102,974,509(+) G/T intron_variant
rs1000024689 -- 102,868,762(+) G/T intron_variant
rs1000025301 -- 102,910,612(+) T/C intron_variant
rs1000054758 -- 102,875,834(+) A/G intron_variant
rs1000083389 -- 102,874,706(+) G/T intron_variant

Additional Variant Information for AZIN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AZIN1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AZIN1-AS1 Gene

Disorders for AZIN1-AS1 Gene

Additional Disease Information for AZIN1-AS1

No disorders were found for AZIN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AZIN1-AS1 Gene

Publications for AZIN1-AS1 Gene

No publications were found for AZIN1-AS1 Gene.

Products for AZIN1-AS1 Gene

Sources for AZIN1-AS1 Gene

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