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Aliases for AZIN1-AS1 Gene

Subcategory (RNA class) for AZIN1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for AZIN1-AS1 Gene

  • AZIN1 Antisense RNA 1 2 3 5

External Ids for AZIN1-AS1 Gene

Summaries for AZIN1-AS1 Gene

GeneCards Summary for AZIN1-AS1 Gene

AZIN1-AS1 (AZIN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AZIN1-AS1 Gene

Genomics for AZIN1-AS1 Gene

Regulatory Elements for AZIN1-AS1 Gene

Enhancers for AZIN1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G102908 1.5 FANTOM5 Ensembl ENCODE dbSUPER 20.9 +45.8 45847 2.6 CTCF JUN TEAD4 MAX SIN3A CEBPB CEBPG KLF4 RAD21 ETS1 AZIN1-AS1 NPM1P52 ENSG00000254236 ATP6V1C1 AZIN1 RPL5P24 GC08P102894
GH08G102886 1.3 Ensembl ENCODE dbSUPER 23.4 +22.8 22796 1.6 HDGF TBL1XR1 SCRT2 ZNF207 RELB ETV6 IKZF2 CREM CBFB USF2 AZIN1-AS1 NPM1P52 ATP6V1C1 ENSG00000254236 ENSG00000253263 GC08M102884
GH08G102902 1.2 Ensembl ENCODE dbSUPER 21.5 +39.4 39354 1.6 MAX CEBPG RAD21 YY1 SCRT2 HNF4G NR2F6 SCRT1 RFX1 NFIA AZIN1-AS1 NPM1P52 ATP6V1C1 ENSG00000254236 GC08P102894 RPL5P24
GH08G102924 1.2 Ensembl ENCODE 18.7 +61.1 61133 2.6 FOXA2 YY1 ZNF766 ZNF143 FOS TBX21 ZNF592 CREB3 MAFF SMARCA4 AZIN1-AS1 AZIN1 ENSG00000253263 NPM1P52 ATP6V1C1 ENSG00000254236 RPL5P24 ENSG00000201216
GH08G102861 1.4 ENCODE dbSUPER 12.2 -0.3 -300 5.2 CREB3L1 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 PPARGC1A ZNF610 AZIN1-AS1 UBR5 ENSG00000272037 LOC401472 ENSG00000253385
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around AZIN1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for AZIN1-AS1 Gene

Chromosome:
8
Start:
102,864,271 bp from pter
End:
102,977,876 bp from pter
Size:
113,606 bases
Orientation:
Plus strand

Genomic View for AZIN1-AS1 Gene

Genes around AZIN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AZIN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AZIN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AZIN1-AS1 Gene

Proteins for AZIN1-AS1 Gene

Post-translational modifications for AZIN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AZIN1-AS1 Gene

Domains & Families for AZIN1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AZIN1-AS1 Gene

Function for AZIN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AZIN1-AS1 Gene

Localization for AZIN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AZIN1-AS1 Gene

Pathways & Interactions for AZIN1-AS1 Gene

SuperPathways for AZIN1-AS1 Gene

No Data Available

Interacting Proteins for AZIN1-AS1 Gene

Gene Ontology (GO) - Biological Process for AZIN1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AZIN1-AS1 Gene

Drugs & Compounds for AZIN1-AS1 Gene

No Compound Related Data Available

Transcripts for AZIN1-AS1 Gene

mRNA/cDNA for AZIN1-AS1 Gene

(16) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AZIN1-AS1 Gene

No ASD Table

Relevant External Links for AZIN1-AS1 Gene

GeneLoc Exon Structure for
AZIN1-AS1
ECgene alternative splicing isoforms for
AZIN1-AS1

Expression for AZIN1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AZIN1-AS1 Gene

genes like me logo Genes that share expression patterns with AZIN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AZIN1-AS1 Gene

Orthologs for AZIN1-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for AZIN1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 99 (a)
OneToOne
Species where no ortholog for AZIN1-AS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for AZIN1-AS1 Gene

ENSEMBL:
Gene Tree for AZIN1-AS1 (if available)
TreeFam:
Gene Tree for AZIN1-AS1 (if available)

Paralogs for AZIN1-AS1 Gene

No data available for Paralogs for AZIN1-AS1 Gene

Variants for AZIN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for AZIN1-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000007991 -- 102,974,509(+) CCTGA(G/T)TTACT intron-variant
rs1000024689 -- 102,868,762(+) AAAAG(G/T)TGAGA intron-variant
rs1000025301 -- 102,910,612(+) GGGAA(C/T)GGGTG intron-variant
rs1000054758 -- 102,875,834(+) TATAT(A/G)ATTGT intron-variant
rs1000083389 -- 102,874,706(+) AGTTT(G/T)GTTTA intron-variant

Relevant External Links for AZIN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AZIN1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AZIN1-AS1 Gene

Disorders for AZIN1-AS1 Gene

Relevant External Links for AZIN1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AZIN1-AS1

No disorders were found for AZIN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AZIN1-AS1 Gene

Publications for AZIN1-AS1 Gene

No publications were found for AZIN1-AS1 Gene.

Products for AZIN1-AS1 Gene

Sources for AZIN1-AS1 Gene

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