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Aliases & Descriptions for AXL
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.10.1 3 JTK11 1 , 2 UFO 1 , 2 , 3
Descriptions AXL oncogene 3 AXL receptor tyrosine kinase 2 AXL transforming sequence/gene 2 oncogene AXL 2
Search outside databases for aliases for AXL genePrevious GC identifers: GC19P042364 GC19P042116 GC19P046400
Summaries for AXL (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for AXL : The protein encoded by this gene is a member of the receptor tyrosine kinase subfamily. Although itis similar to other receptor tyrosine kinases, this protein represents a unique structure of theextracellular region that juxtaposes IgL and FNIII repeats. It transduces signals from theextracellular matrix into the cytoplasm by binding growth factors like vitamin K-dependent proteingrowth-arrest-specific gene 6. It is involved in the stimulation of cell proliferation and canalso mediate cell aggregation by homophilic binding. Alternatively spliced transcript variantsencoding different isoforms have been identified. [provided by RefSeq] UniProtKB/Swiss-Prot: UFO_HUMAN, P30530 Function : May function as a signal transducer between specific cell types of mesodermal origin. Incase of filovirus infection, seems to function as a cell entry factor
Gene Wiki entry for AXL (AXL_receptor_tyrosine_kinase)
Genomic Location for AXL
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the AXL gene Entrez Gene cytogenetic band: 19q13.1 Ensembl cytogenetic band: 19q13.2 HGNC cytogenetic band: 19q13.1 AXL Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19P046416:
(about GC identifiers )
Start:
46,416,948 bp from pter
End:
46,459,511 bp from pter
Size:
42,564 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000019.8 NT_011109.15 Proteins for AXL
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: UFO_HUMAN, P30530 (See
protein sequence )Recommended Name: Tyrosine-protein kinase receptor UFO precursor Size : 894 amino acids; 98336 Da
Subunit : Heterodimer and heterotetramer with GAS6
Subcellular location : Membrane; Single-pass type I membrane protein
PDB structures from and Proteopedia : 2C5D (3D)
 
Secondary accessions : Q8N5L2 Q9UD27Alternative splicing : 2 isoforms : P30530-1 P30530-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001690.2 NP_068713.2 ENSEMBL proteins: ENSP00000351995 ENSP00000301178 Human Recombinant Proteins Invitrogen human recombinant proteins for AXL Millipore Purified and/or Recombinant AXL Protein Sigma-Aldrich Proteins for AXL R&D Systems Recombinant & Natural Proteins for AXL Enzo Life Sciences proteins for AXL Recombinant Proteins from Abcam (Axl ) Human Recombinant Proteins from Abnova (AXL )
              OriGene Purified Recombinant Human Protein: AXL 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for AXL: Assays for AXL:
Protein
Domains/ Families for AXL(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P30530 ProtoNet protein and cluster: P30530
2 Blocks protein families : IPB003599 Immunoglobulin subtype IPB008266 Tyrosine protein kinase UniProtKB/Swiss-Prot: UFO_HUMAN, P30530 Similarity : Belongs to the protein kinase superfamily. Tyr protein kinase family. AXL/UFO subfamilySimilarity : Contains 2 fibronectin type-III domainsSimilarity : Contains 2 Ig-like C2-type (immunoglobulin-like) domainsSimilarity : Contains 1 protein kinase domain
Gene Function for AXL
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (AXL ) Millipore RNAi Products for the Analysis of AXL Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (AXL )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001699 Applied Biosystems Silencer ® siRNAs for AXL Sigma-Aldrich siRNA and siRNA Panels for AXL Sigma-Aldrich shRNA Panels and shRNA for AXL Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001699                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001699                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001699  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_021913 UniProtKB/Swiss-Prot: UFO_HUMAN, P30530 Function : May function as a signal transducer between specific cell types of mesodermal origin. Incase of filovirus infection, seems to function as a cell entry factor Catalytic activity : ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphateEnzyme Number (IUBMB): EC 2.7.10.1
Genatlas biochemistry entry for AXL :AXL transforming sequence,activated by GAS6,involved in the protection of neurons from apoptosisacross neuronal migration,expressed in neural lymphoid,vascular and reproductive tissue,involvedin the regulation of spermatogenesis and in primary and tumor cell lines derived from thesesources
13 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Axl) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
About this table
Pathways & Interactions for AXL
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for AXL (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for AXL 5/23 Interacting proteins for AXL (P30530 2 ENSP00000301178 3 ) via UniProtKB, MINT, and/or STRING (see all 23
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for AXL (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for AXL 4 Novoseek chemical compound relationships for AXL gene
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Transcripts for AXL(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (AXL ) Millipore RNAi Products for the Analysis of AXL Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (AXL )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001699 Sigma-Aldrich siRNA and siRNA Panels for AXL Sigma-Aldrich shRNA Panels and shRNA for AXL Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001699 NM_021913
REFSEQ mRNAs for AXL gene (2 alternative transcripts): NM_001699.4 NM_021913.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001699 NM_021913
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001699                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001699                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001699  
Additional cDNA sequence: AK309139.1 AK310881.1 BC032229.1 M76125.1 S65125.1 X57019.1 X66029.1
15 DOTS entries : DT.100786483 DT.97805775 DT.91755245 DT.100029048 DT.100780536 DT.456157 DT.100041719 DT.121460717 DT.91677197 DT.91683879 DT.121460881 DT.121461087 DT.91681161 DT.95191274 DT.95375668
24/304 AceView cDNA sequences (see all 304
):BI871630 BU542214 CB160525 BQ960243 AA330590 AW838036 BQ435953 AA425944 AI309979 BM449982 BM695457 AI343551 BQ446686 AW838042 F07212 BQ774129 CN482730 AW377752 CA440405 CA418366 BQ641894 CD671303 BQ708279 AI096939
highest scoring ESTs for AXL :M76125 AA039995 AA040011 AA302422 AA641133 AI073459 AI160010 AI350512 AI393212 AI420198
Unigene Cluster for AXL: AXL receptor tyrosine kinase Hs.590970 [show with all ESTs ] Unigene Representative Sequence: NM_021913 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for AXL ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 SP1 :     -                                           SP2 :     -                     -                       SP3 :                                              
About this scheme ECgene alternative splicing isoforms for AXL 2 Ensembl transcripts including schematic representations : ENST00000359092
ENST00000301178
Expression for AXL
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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AXL expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for AXL 1 / 2 / 3
7 probe-sets matching AXL gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TTGCCCCCGTSOURCE GeneReport for Unigene cluster: Hs.590970 Expression variation in blood from EXPOLDB for AXL
UniProtKB/Swiss-Prot: UFO_HUMAN, P30530 Tissue specificity : Highly expressed in metastatic colon tumors. Expressed in primary colon tumors.Weakly expressed in normal colon tissue
Orthologs for AXL
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for AXL gene from 5 species
About this table Species with no ortholog for AXL ENSEMBL Gene Tree for AXL Paralogs for AXL (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for AXL gene RYK 2 TYRO3 2 MERTK 2
SNPs/Variants for AXL (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for AXL (up to first 250kb)
Disorders & Mutations for AXL
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 109135 UniProtKB/Swiss-Prot: UFO_HUMAN, P30530
Has transforming potential in patients with chronic myeloproliferative disorder or chronicmyelocytic leukemia
10/29 Novoseek disease relationships for AXL gene (see all 29
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
myeloid leukemia
51.75
7
8656672 (1), 9130617 (1), 1656220 (1), 15380678 (1) (see all 6 )
glomerulonephritis mesangial proliferative
47.47
1
11290560 (1)
myeloid leukemia chronic
31.65
7
7521695 (2), 8235704 (1), 7848912 (1), 10528229 (1)
thyroid carcinoma
27.54
17
10411118 (6), 9492013 (3), 12490074 (3)
renal disease
27.40
3
14750094 (2), 12768229 (1)
myeloproliferative disorders
20.37
3
7521695 (1)
carcinoma papillary
19.47
1
12490074 (1)
diabetic nephropathies
18.83
2
18374201 (1)
glomerulonephritis
17.60
4
11290560 (1), 12644472 (1), 15199298 (1)
leukemia
15.23
12
10482985 (3), 8656672 (2), 10528229 (1), 15605394 (1) (see all 6 )
About this table Human Gene Mutation Database : AXL
Medical News for AXL (Possibly Related Articles in
Doctor's Guide )
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--
Publications for AXL (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/147 PubMed articles for AXL gene (see all 147
): AXL, a transforming gene isolated from primary human myeloid leukemia cells, encodes a novel receptor tyrosine kinase. (PubMed id 1656220) 1, 2, 3, 4 O'Bryan J.P.... Liu E.T. (1991) Structural basis for Gas6-Axl signalling. (PubMed id 16362042) 1, 3, 4 Sasaki T.... Hohenester E. (2006) A novel putative tyrosine kinase receptor with oncogenic potential. (PubMed id 1834974) 1, 3, 4 Janssen J.W.G.... Bartram C.R. (1991) Tyro3 family-mediated cell entry of Ebola and Marburg viruses. (PubMed id 17005688) 3, 4 Shimojima M....Kawaoka Y. (2006) A survey of protein tyrosine kinase mRNAs expressed in normal human melanocytes. (PubMed id 8247543) 3, 4 Lee S.-T.... Spritz R.A. (1993) Putative tyrosine kinases expressed in K-562 human leukemia cells. (PubMed id 2247464) 3, 4 Partanen J.... Alitalo K. (1990) The Ran binding protein RanBPM interacts with Axl and Sky receptor tyrosine kinases. (PubMed id 15964779) 1, 3 Hafizi S....Dahlback B. (2005) Axl and growth arrest-specific gene 6 are frequently overexpressed in human gliomas and predict poor prognosis in patients with glioblastoma multiforme. (PubMed id 18172262) 1, 3 Hutterer M....Ullrich A. (2008) Effects of Gas6 and hydrogen peroxide in Axl ubiquitination and downregulation. (PubMed id 15958209) 1, 3 Valverde P. (2005) Expression of axl in lung adenocarcinoma and correlation with tumor progression. (PubMed id 16354588) 1, 3 Shieh Y.S....Wu C.W. (2005)
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Genome Databases showing AXL
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Specialized Databases showing AXL (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for AXL (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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