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Aliases for ATP8B5P Gene

Aliases for ATP8B5P Gene

  • ATPase Phospholipid Transporting 8B5, Pseudogene 2 3 5
  • Flippase Expressed In Testis Splicing Form A Pseudogene 2 3
  • ATPase, Class I, Type 8B, Member 5, Pseudogene 2 3
  • ATPase, Class I, Type 8B Family Pseudogene 3
  • Zinc Finger, AN1-Type Domain 6 Pseudogene 3
  • FETA 3

External Ids for ATP8B5P Gene

Previous GeneCards Identifiers for ATP8B5P Gene

  • GC09P035407

Summaries for ATP8B5P Gene

GeneCards Summary for ATP8B5P Gene

ATP8B5P (ATPase Phospholipid Transporting 8B5, Pseudogene) is a Pseudogene.

Additional gene information for ATP8B5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP8B5P Gene

Genomics for ATP8B5P Gene

Regulatory Elements for ATP8B5P Gene

Enhancers for ATP8B5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H034987 1.6 FANTOM5 ENCODE dbSUPER 10.3 -413.5 -413476 10 HDGF PKNOX1 ARID4B SIN3A YY1 ZNF207 ZNF143 FOS DEK SP3 VCP UBAP2 ARHGEF39 TPM2 FANCG CCDC107 TLN1 YBX1P10 PIGO FAM205A
GH09H035069 1.3 ENCODE dbSUPER 10.3 -334.9 -334861 4 HDGF PKNOX1 ARID4B SIN3A YY1 ZNF207 ZNF143 FOS SP3 CEBPZ VCP FANCG TMEM8B FAM205A C9orf131 ENSG00000228352 ATP8B5P PIGO NPR2 RN7SL338P
GH09H035813 1.1 ENCODE 10.3 +407.8 407845 2 HDGF FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 TMEM8B HMGB3P24 RNF38 SPAG8 C9orf131 ATP8B5P VCP CREB3 HINT2
GH09H034619 0.9 ENCODE 10.3 -786.4 -786369 1 HDGF PKNOX1 ATF1 ARID4B SIN3A DMAP1 BRCA1 YY1 ELK1 FOS UBAP2 FAM205A RPP25L C9orf131 ATP8B5P VCP SIGMAR1 DCTN3
GH09H036035 1.7 FANTOM5 Ensembl ENCODE dbSUPER 4.3 +631.7 631728 5 SIN3A FEZF1 BRCA1 GLIS2 SCRT2 FOS RCOR1 SP3 ZNF362 NFYC RECK GLIPR2 ATP8B5P OR2S2 ENSG00000276730
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ATP8B5P on UCSC Golden Path with GeneCards custom track

Genomic Location for ATP8B5P Gene

Chromosome:
9
Start:
35,406,755 bp from pter
End:
35,483,035 bp from pter
Size:
76,281 bases
Orientation:
Plus strand

Genomic View for ATP8B5P Gene

Genes around ATP8B5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP8B5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP8B5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP8B5P Gene

Proteins for ATP8B5P Gene

Post-translational modifications for ATP8B5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP8B5P Gene

Domains & Families for ATP8B5P Gene

Gene Families for ATP8B5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ATP8B5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP8B5P Gene

Function for ATP8B5P Gene

Phenotypes for ATP8B5P Gene

GenomeRNAi human phenotypes for ATP8B5P:
genes like me logo Genes that share phenotypes with ATP8B5P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for ATP8B5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP8B5P Gene

Localization for ATP8B5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP8B5P Gene

Pathways & Interactions for ATP8B5P Gene

SuperPathways for ATP8B5P Gene

No Data Available

Interacting Proteins for ATP8B5P Gene

Gene Ontology (GO) - Biological Process for ATP8B5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ATP8B5P Gene

Drugs & Compounds for ATP8B5P Gene

No Compound Related Data Available

Transcripts for ATP8B5P Gene

mRNA/cDNA for ATP8B5P Gene

(8) Additional mRNA sequences :
(17) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ATP8B5P Gene

ATPase, class I, type 8B, member 5, pseudogene:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for ATP8B5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ATP8B5P Gene

No ASD Table

Relevant External Links for ATP8B5P Gene

GeneLoc Exon Structure for
ATP8B5P
ECgene alternative splicing isoforms for
ATP8B5P

Expression for ATP8B5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ATP8B5P Gene

mRNA differential expression in normal tissues according to GTEx for ATP8B5P Gene

This gene is overexpressed in Testis (x29.4).

NURSA nuclear receptor signaling pathways regulating expression of ATP8B5P Gene:

ATP8B5P

SOURCE GeneReport for Unigene cluster for ATP8B5P Gene:

Hs.575661
genes like me logo Genes that share expression patterns with ATP8B5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP8B5P Gene

Orthologs for ATP8B5P Gene

Evolution for ATP8B5P Gene

ENSEMBL:
Gene Tree for ATP8B5P (if available)
TreeFam:
Gene Tree for ATP8B5P (if available)

No data available for Orthologs for ATP8B5P Gene

Paralogs for ATP8B5P Gene

No data available for Paralogs for ATP8B5P Gene

Variants for ATP8B5P Gene

Sequence variations from dbSNP and Humsavar for ATP8B5P Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000048622 -- 35,462,058(+) AATTC(C/T)CTGAA intron-variant
rs1000072442 -- 35,430,596(+) CAGTT(G/T)ATTTT intron-variant
rs1000096091 -- 35,407,227(+) TTGCT(A/G)TCATT intron-variant
rs1000135610 -- 35,413,686(+) GTATT(A/T)TTATA intron-variant
rs1000153334 -- 35,455,573(+) AGGGG(A/T)TCTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ATP8B5P Gene

Variant ID Type Subtype PubMed ID
nsv1030303 CNV gain 25217958
nsv1125318 OTHER inversion 24896259
nsv474476 CNV novel sequence insertion 20440878
nsv831545 CNV loss 17160897
nsv982211 CNV duplication 23825009

Relevant External Links for ATP8B5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP8B5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ATP8B5P Gene

Disorders for ATP8B5P Gene

Relevant External Links for ATP8B5P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ATP8B5P

No disorders were found for ATP8B5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP8B5P Gene

Publications for ATP8B5P Gene

  1. Identification of a novel mouse P4-ATPase family member highly expressed during spermatogenesis. (PMID: 19657017) Xu P … Ding XY (Journal of cell science 2009) 2 3 60
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3 60
  3. Muscle function and postural balance in lifelong trained male footballers compared with sedentary elderly men and youngsters. (PMID: 20210903) Sundstrup E … Krustrup P (Scandinavian journal of medicine & science in sports 2010) 2 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ATP8B5P Gene

Sources for ATP8B5P Gene

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