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Aliases for ATP6V0E2-AS1 Gene

Subcategory (RNA class) for ATP6V0E2-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ATP6V0E2-AS1 Gene

  • ATP6V0E2 Antisense RNA 1 2 3
  • ATP6V0E2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ATP6V0E2-AS1 Gene

Summaries for ATP6V0E2-AS1 Gene

GeneCards Summary for ATP6V0E2-AS1 Gene

ATP6V0E2-AS1 (ATP6V0E2 Antisense RNA 1) is an RNA Gene, and belongs to the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP6V0E2-AS1 Gene

Genomics for ATP6V0E2-AS1 Gene

Genomic Location for ATP6V0E2-AS1 Gene

Start:
149,867,694 bp from pter
End:
149,880,610 bp from pter
Size:
12,917 bases
Orientation:
Minus strand

Genomic View for ATP6V0E2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ATP6V0E2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP6V0E2-AS1 Gene

No data available for Regulatory Elements for ATP6V0E2-AS1 Gene

Proteins for ATP6V0E2-AS1 Gene

Post-translational modifications for ATP6V0E2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP6V0E2-AS1 Gene

Domains for ATP6V0E2-AS1 Gene

Gene Families for ATP6V0E2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ATP6V0E2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP6V0E2-AS1 Gene

Function for ATP6V0E2-AS1 Gene

Phenotypes for ATP6V0E2-AS1 Gene

GenomeRNAi human phenotypes for ATP6V0E2-AS1:
genes like me logo Genes that share phenotypes with ATP6V0E2-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ATP6V0E2-AS1 Gene

Localization for ATP6V0E2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ATP6V0E2-AS1 Gene

Pathways for ATP6V0E2-AS1 Gene

SuperPathways for ATP6V0E2-AS1 Gene

No Data Available

Interacting Proteins for ATP6V0E2-AS1 Gene

Gene Ontology (GO) - Biological Process for ATP6V0E2-AS1 Gene

None

No data available for Pathways by source for ATP6V0E2-AS1 Gene

Transcripts for ATP6V0E2-AS1 Gene

mRNA/cDNA for ATP6V0E2-AS1 Gene

Unigene Clusters for ATP6V0E2-AS1 Gene

ATP6V0E2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ATP6V0E2-AS1 Gene

No ASD Table

Relevant External Links for ATP6V0E2-AS1 Gene

GeneLoc Exon Structure for
ATP6V0E2-AS1
ECgene alternative splicing isoforms for
ATP6V0E2-AS1

Expression for ATP6V0E2-AS1 Gene

mRNA expression in normal human tissues for ATP6V0E2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ATP6V0E2-AS1 Gene

This gene is overexpressed in Brain - Hippocampus (4.2).

SOURCE GeneReport for Unigene cluster for ATP6V0E2-AS1 Gene Hs.744860

genes like me logo Genes that share expressions with ATP6V0E2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ATP6V0E2-AS1 Gene

Orthologs for ATP6V0E2-AS1 Gene

Evolution for ATP6V0E2-AS1 Gene

ENSEMBL:
Gene Tree for ATP6V0E2-AS1 (if available)
TreeFam:
Gene Tree for ATP6V0E2-AS1 (if available)

No data available for Orthologs for ATP6V0E2-AS1 Gene

Paralogs for ATP6V0E2-AS1 Gene

No data available for Paralogs for ATP6V0E2-AS1 Gene

Variants for ATP6V0E2-AS1 Gene

Sequence variations from dbSNP and Humsavar for ATP6V0E2-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs2067754 -- 149,870,791(-) ACCAG(C/G)ATGTG intron-variant
rs3735333 -- 149,868,074(+) TGGAA(A/C/G)CAGAG nc-transcript-variant
rs3735334 -- 149,868,400(+) ACATC(C/T)GGAGT nc-transcript-variant
rs3735335 -- 149,868,455(+) TCAGT(C/G)CCTGT nc-transcript-variant
rs3735336 -- 149,868,796(+) GGGCG(A/C)AGACA nc-transcript-variant

Relevant External Links for ATP6V0E2-AS1 Gene

HapMap Linkage Disequilibrium report
ATP6V0E2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ATP6V0E2-AS1 Gene

Disorders for ATP6V0E2-AS1 Gene

No disorders were found for ATP6V0E2-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for ATP6V0E2-AS1 Gene

Publications for ATP6V0E2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for ATP6V0E2-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ATP6V0E2-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ATP6V0E2-AS1
    • Block miRNA regulation of ATP6V0E2-AS1 using miScript Target Protectors

    Sources for ATP6V0E2-AS1 Gene

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