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Aliases for ATP6V0CP3 Gene

Subcategory (RNA class) for ATP6V0CP3 Gene

lncRNA

Aliases for ATP6V0CP3 Gene

  • ATPase, H+ Transporting, Lysosomal 16kDa, V0 Subunit C Pseudogene 3 2 3

External Ids for ATP6V0CP3 Gene

ORGUL Members for ATP6V0CP3 Gene

Summaries for ATP6V0CP3 Gene

GeneCards Summary for ATP6V0CP3 Gene

ATP6V0CP3 (ATPase, H+ Transporting, Lysosomal 16kDa, V0 Subunit C Pseudogene 3) is a Pseudogene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP6V0CP3 Gene

Genomics for ATP6V0CP3 Gene

Genomic Location for ATP6V0CP3 Gene

Start:
42,727,234 bp from pter
End:
42,728,194 bp from pter
Size:
961 bases
Orientation:
Plus strand

Genomic View for ATP6V0CP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ATP6V0CP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP6V0CP3 Gene

No data available for Regulatory Elements for ATP6V0CP3 Gene

Proteins for ATP6V0CP3 Gene

Post-translational modifications for ATP6V0CP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP6V0CP3 Gene

Domains for ATP6V0CP3 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for ATP6V0CP3 Gene

Function for ATP6V0CP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ATP6V0CP3 Gene

Localization for ATP6V0CP3 Gene

No data available for Gene Ontology (GO) - Cellular Components for ATP6V0CP3 Gene

Pathways for ATP6V0CP3 Gene

SuperPathways for ATP6V0CP3 Gene

No Data Available

Interacting Proteins for ATP6V0CP3 Gene

Gene Ontology (GO) - Biological Process for ATP6V0CP3 Gene

None

No data available for Pathways by source for ATP6V0CP3 Gene

Transcripts for ATP6V0CP3 Gene

mRNA/cDNA for ATP6V0CP3 Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ATP6V0CP3 Gene

ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ATP6V0CP3 Gene

No ASD Table

Relevant External Links for ATP6V0CP3 Gene

GeneLoc Exon Structure for
ATP6V0CP3
ECgene alternative splicing isoforms for
ATP6V0CP3

Expression for ATP6V0CP3 Gene

mRNA expression in normal human tissues for ATP6V0CP3 Gene

SOURCE GeneReport for Unigene cluster for ATP6V0CP3 Gene Hs.563394

genes like me logo Genes that share expressions with ATP6V0CP3: view

Orthologs for ATP6V0CP3 Gene

Evolution for ATP6V0CP3 Gene

ENSEMBL:
Gene Tree for ATP6V0CP3 (if available)
TreeFam:
Gene Tree for ATP6V0CP3 (if available)

No data available for Orthologs for ATP6V0CP3 Gene

Paralogs for ATP6V0CP3 Gene

No data available for Paralogs for ATP6V0CP3 Gene

Variants for ATP6V0CP3 Gene

Sequence variations from dbSNP and Humsavar for ATP6V0CP3 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs3209957 -- 42,727,326(+) GCTGC(C/T)TATGG upstream-variant-2KB
rs9381214 -- 42,726,221(+) AGTGA(C/T)TTCAA upstream-variant-2KB
rs11445050 -- 42,725,859(+) AAAAA(-/A)GAACA upstream-variant-2KB
rs34897182 -- 42,726,032(+) ACTAG(-/A)ACTCA upstream-variant-2KB
rs57580611 -- 42,725,704(+) AAAAA(-/AA)TAGCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ATP6V0CP3 Gene

Variant ID Type Subtype PubMed ID
nsv830650 CNV Loss 17160897

Relevant External Links for ATP6V0CP3 Gene

HapMap Linkage Disequilibrium report
ATP6V0CP3

Disorders for ATP6V0CP3 Gene

No disorders were found for ATP6V0CP3 Gene.

No data available for UniProtKB/Swiss-Prot for ATP6V0CP3 Gene

Publications for ATP6V0CP3 Gene

No publications were found for ATP6V0CP3 Gene.

Products for ATP6V0CP3 Gene

Sources for ATP6V0CP3 Gene

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