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Aliases for ATP6V0CP3 Gene

Subcategory (RNA class) for ATP6V0CP3 Gene

lncRNA

Aliases for ATP6V0CP3 Gene

  • ATPase, H+ Transporting, Lysosomal 16kDa, V0 Subunit C Pseudogene 3 2 3

External Ids for ATP6V0CP3 Gene

ORGUL Members for ATP6V0CP3 Gene

Summaries for ATP6V0CP3 Gene

GeneCards Summary for ATP6V0CP3 Gene

ATP6V0CP3 (ATPase, H+ Transporting, Lysosomal 16kDa, V0 Subunit C Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP6V0CP3 Gene

Genomics for ATP6V0CP3 Gene

Genomic Location for ATP6V0CP3 Gene

Start:
42,727,234 bp from pter
End:
42,728,194 bp from pter
Size:
961 bases
Orientation:
Plus strand

Genomic View for ATP6V0CP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ATP6V0CP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP6V0CP3 Gene

No data available for Regulatory Elements for ATP6V0CP3 Gene

Proteins for ATP6V0CP3 Gene

Post-translational modifications for ATP6V0CP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP6V0CP3 Gene

Domains for ATP6V0CP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP6V0CP3 Gene

Function for ATP6V0CP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ATP6V0CP3 Gene

Localization for ATP6V0CP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ATP6V0CP3 Gene

Pathways for ATP6V0CP3 Gene

SuperPathways for ATP6V0CP3 Gene

No Data Available

Interacting Proteins for ATP6V0CP3 Gene

Gene Ontology (GO) - Biological Process for ATP6V0CP3 Gene

None

No data available for Pathways by source for ATP6V0CP3 Gene

Transcripts for ATP6V0CP3 Gene

mRNA/cDNA for ATP6V0CP3 Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ATP6V0CP3 Gene

ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 3:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ATP6V0CP3
    • Block miRNA regulation of ATP6V0CP3 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ATP6V0CP3

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ATP6V0CP3 Gene

    No ASD Table

    Relevant External Links for ATP6V0CP3 Gene

    GeneLoc Exon Structure for
    ATP6V0CP3
    ECgene alternative splicing isoforms for
    ATP6V0CP3

    Expression for ATP6V0CP3 Gene

    mRNA expression in normal human tissues for ATP6V0CP3 Gene

    SOURCE GeneReport for Unigene cluster for ATP6V0CP3 Gene Hs.563394

    genes like me logo Genes that share expressions with ATP6V0CP3: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ATP6V0CP3 Gene

    Orthologs for ATP6V0CP3 Gene

    Evolution for ATP6V0CP3 Gene

    ENSEMBL:
    Gene Tree for ATP6V0CP3 (if available)
    TreeFam:
    Gene Tree for ATP6V0CP3 (if available)

    No data available for Orthologs for ATP6V0CP3 Gene

    Paralogs for ATP6V0CP3 Gene

    No data available for Paralogs for ATP6V0CP3 Gene

    Variants for ATP6V0CP3 Gene

    Sequence variations from dbSNP and Humsavar for ATP6V0CP3 Gene

    SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
    rs3209957 -- 42,727,326(+) GCTGC(C/T)TATGG upstream-variant-2KB
    rs9381214 -- 42,726,221(+) AGTGA(C/T)TTCAA upstream-variant-2KB
    rs11445050 -- 42,725,859(+) AAAAA(-/A)GAACA upstream-variant-2KB
    rs34897182 -- 42,726,032(+) ACTAG(-/A)ACTCA upstream-variant-2KB
    rs57580611 -- 42,725,704(+) AAAAA(-/AA)TAGCT upstream-variant-2KB

    Structural Variations from Database of Genomic Variants (DGV) for ATP6V0CP3 Gene

    Variant ID Type Subtype PubMed ID
    nsv830650 CNV Loss 17160897

    Relevant External Links for ATP6V0CP3 Gene

    HapMap Linkage Disequilibrium report
    ATP6V0CP3

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ATP6V0CP3 Gene

    Disorders for ATP6V0CP3 Gene

    No disorders were found for ATP6V0CP3 Gene.

    No data available for UniProtKB/Swiss-Prot for ATP6V0CP3 Gene

    Publications for ATP6V0CP3 Gene

    No publications were found for ATP6V0CP3 Gene.

    Products for ATP6V0CP3 Gene

    Sources for ATP6V0CP3 Gene

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