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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ATP5J2 Gene

protein-coding   GIFtS: 56
GCID: GC07M099046

ATP synthase, H+ transporting, mitochondrial Fo complex,...

(Previous names: ATP synthase, H+ transporting, mitochondrial F0 complex,...)
 Explore 6 diseases affiliated with
ATP5J2 via
MalaCards
our new
 Human Malady Compendium 
Biological research products
for ATP5J2    

Aliases
for ATP5J2 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
ATP Synthase, H+ Transporting, Mitochondrial Fo Complex, Subunit F21 2     ATP Synthase Subunit F, Mitochondrial2
ATP5JL1 2 3     ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit F2
F1Fo-ATPase1     F1F0-Type ATPase Subunit F2
ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit F, Isoform 21     F1Fo-ATP Synthase Complex Fo Membrane Domain F Subunit2
ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit F21     F1Fo-ATPase Synthase F Subunit2
ATP Synthase F Chain, Mitochondrial2     

External Ids:    HGNC: 8481   Entrez Gene: 95512   Ensembl: ENSG000002414687   UniProtKB: P561343   

Export aliases for ATP5J2 gene to outside databases

Previous GC identifers: GC07M097590 GC07M098653 GC07M098667 GC07M098700 GC07M098893 GC07M093692


Summaries
for ATP5J2 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for ATP5J2:
Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner
membrane during oxidative phosphorylation. It is composed of two linked multi-subunit complexes: the soluble catalytic
core, F1, and the membrane-spanning component, Fo, which comprises the proton channel. The catalytic portion of
mitochondrial ATP synthase consists of five different subunits (alpha, beta, gamma, delta, and epsilon) assembled with
a stoichiometry of 3 alpha, 3 beta, and single representatives of the gamma, delta, and epsilon subunits. The proton
channel likely has nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene encodes the f subunit of the Fo complex.
Alternatively spliced transcript variants encoding different isoforms have been identified for this gene. This gene
has multiple pseudogenes. Naturally occurring read-through transcription also exists between this gene and the
downstream pentatricopeptide repeat domain 1 (PTCD1) gene. (provided by RefSeq, Nov 2010)

UniProtKB/Swiss-Prot: ATPK_HUMAN, P56134
Function: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the
presence of a proton gradient across the membrane which is generated by electron transport complexes of the
respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic
core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk.
During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk
subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the
membrane

Gene Wiki entry for ATP5J2


Genomic Views
for ATP5J2 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.1  NT_007933.15  NT_079595.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ATP5J2 gene promoter:
         USF1   MyoD   HNF-3beta   Roaz   C/EBPalpha   AREB6   CP2   USF-1   FOXO1a   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): ATP5J2 promoter sequence
   Search SABiosciences Chromatin IP Primers for ATP5J2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ATP5J2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7q22.1   Ensembl cytogenetic band:  7q22.1   HGNC cytogenetic band: 7q22.1

ATP5J2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ATP5J2 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07M099046:  view genomic region     (about GC identifiers)

Start:
 99,046,098 bp from pter      End:
 99,063,954 bp from pter
Size:
 17,857 bases      Orientation:
 minus strand

1 alternative location:
Chr7-,CRA_TCAG 98,415,556-98,423,580     

Proteins
for ATP5J2 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: ATPK_HUMAN, P56134 (See protein sequence)
Recommended Name: ATP synthase subunit f, mitochondrial  
Size: 94 amino acids; 10918 Da
Subunit: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(0)
seems to have nine subunits: a, b, c, d, e, f, g, F6 and 8 (or A6L). Component of an ATP synthase complex composed of
ATP5F1, ATP5G1, ATP5E, ATP5H, ATP5I, ATP5J, ATP5J2, MT-ATP6, MT-ATP8, ATP5A1, ATP5B, ATP5D, ATP5C1, ATP5O, ATP5L,
USMG5 and MP68 (By similarity)
Subcellular location: Mitochondrion. Mitochondrion inner membrane; Single-pass membrane protein (Potential)
Secondary accessions: O76079 Q6IBB3 Q96L83 Q9BTI8
Alternative splicing: 2 isoforms:  P56134-1   P56134-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for ATP5J2: NX_P56134

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P56134

    • ATP5J2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (4 alternative transcripts): 
    NP_001003713.1  NP_001003714.1  NP_001034267.1  NP_004880.1  

    ENSEMBL proteins: 
     ENSP00000412149   ENSP00000407540   ENSP00000352890   ENSP00000292475   ENSP00000418197  
     ENSP00000377740   ENSP00000430398   ENSP00000444922  
    Reactome Protein details: P56134
    Human Recombinant Protein Products: 
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    Uscn Proteins for ATP5J2

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005739mitochondrion ----
    GO:0005743mitochondrial inner membrane TAS--
    GO:0005753mitochondrial proton-transporting ATP synthase complex NAS11959398
    GO:0016021integral to membrane IEA--
    GO:0045263proton-transporting ATP synthase complex, coupling factor F(o) IEA--


    ATP5J2 for ontologies           About GeneDecksing



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    Protein Domains /
    Families
    for ATP5J2 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    ATP5J2 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR019344 F1F0-ATPsyn_F_prd

    Graphical View of Domain Structure for InterPro Entry P56134

    ProtoNet protein and cluster: P56134

    UniProtKB/Swiss-Prot: ATPK_HUMAN, P56134
    Similarity: Belongs to the ATPase F chain family


    Function
    for ATP5J2 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:

         UniProtKB/Swiss-Prot: ATPK_HUMAN, P56134
    Function: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the
    presence of a proton gradient across the membrane which is generated by electron transport complexes of the
    respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic
    core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk.
    During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk
    subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the
    membrane

         Genatlas biochemistry entry for ATP5J2:
    ATP synthase H+ transporting,inner mitochondrial membrane (F0 segment),subunit F6,isoform 2,complex V of oxidative
    phosphorylation (OXPHOS)

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    Gene Editing
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    In Situ Assay
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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016887contributes to ATPase activity IDA12110673
    GO:0022857transmembrane transporter activity IC12110673


    ATP5J2 for ontologies           About GeneDecksing



    Pathways & Interactions
    for ATP5J2 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
    		Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.1.00
    		Oxidative phosphorylation0.63
    		Electron Transport Chain0.76
    		Oxidative phosphorylation0.52
    		The citric acid (TCA) cycle and respiratory electron transport0.72
    2Metabolism
    		Metabolism1.00
    		Metabolic pathways0.38
    3Formation of ATP by chemiosmotic coupling
    		Formation of ATP by chemiosmotic coupling1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for ATP5J2 
        Electron Transport Chain
    Oxidative phosphorylation

    4        Reactome Pathways for ATP5J2
        Formation of ATP by chemiosmotic coupling
    Metabolism
    Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
    The citric acid (TCA) cycle and respiratory electron transport


    2         Kegg Pathways  (Kegg details for ATP5J2):
        Oxidative phosphorylation
    Metabolic pathways


    ATP5J2 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ATP5J2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/81 Interacting proteins for ATP5J2 (P561342, 3 ENSP000002924754) via UniProtKB, MINT, STRING, and/or I2D (see all 81)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CAPNS1P046322, 3, ENSP000002465334MINT-63892 I2D: score=5 STRING: ENSP00000246533
    CRELD1Q96HD12, 3MINT-63897 I2D: score=5 
    KDM1AO603412, 3MINT-63890 I2D: score=5 
    NDUFA6P565562, 3MINT-63895 I2D: score=5 
    PRPF4O431722, 3MINT-63889 I2D: score=5 
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006200ATP catabolic process IDA12110673
    GO:0015992proton transport NAS11959398
    GO:0022904respiratory electron transport chain TAS--
    GO:0042776mitochondrial ATP synthesis coupled proton transport TAS--
    GO:0044281small molecule metabolic process TAS--


    ATP5J2 for ontologies           About GeneDecksing



    Drugs & Compounds
    for ATP5J2 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    EMD Millipore small molecules for ATP5J2:
    Small Molecule - inhibitor
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    Compounds for ATP5J2 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    EnterostatinBinds to beta-subunit of F1-ATPase; anorexigenic peptide[117830-79-2]

    4 HMDB Compounds for ATP5J2    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    PhosphateNFB Orthophosphate (see all 13)14265-44-2--
    WaterDihydrogen oxide (see all 2)7732-18-5--
    Search CenterWatch for drugs/clinical trials and news about ATP5J2 / ATPK 

    Transcripts
    for ATP5J2 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for ATP5J2 gene (6 alternative transcripts): 
    NM_001003713.2  NM_001003714.2  NM_001039178.2  NM_004889.3  NM_001190353.1  NM_001190354.1  

    Unigene Clusters for ATP5J2:

    ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
    Hs.521056  [show with all ESTs], Hs.656515  [show with all ESTs]
    Unigene Representative Sequences: AK123419, CD249884
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000466753 ENST00000414062 ENST00000449683 ENST00000491560 ENST00000359832
    ENST00000292475(uc003uqm.3 uc003uql.3 uc003uqo.3 uc003uqn.3)
    ENST00000488775 ENST00000394186 ENST00000481899 ENST00000523680 ENST00000485011
    ENST00000524321 ENST00000544611

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    Inhib. RNA
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    Additional cDNA sequence: 

    CR456891.1 CR542155.1 

    24/43 DOTS entries (see all 43):

    DT.121392488  DT.75171932  DT.121072469  DT.121072253  DT.121072153  DT.87007881  DT.95117726  DT.95068687 
    DT.121072170  DT.121072258  DT.100643903  DT.100826546  DT.95124496  DT.121072440  DT.121072474  DT.95152476 
    DT.100674364  DT.121072355  DT.121072136  DT.121072450  DT.100826547  DT.121072169  DT.121072322  DT.121072408 

    24/399 AceView cDNA sequences (see all 399):

    NM_001003714 CB153694 CB120067 BG981068 BM841401 CB113856 CB119143 AI273609 
    AI191847 AI026004 BM996728 NM_004889 BF914677 BM046322 BM855941 F32180 
    AI042221 NM_001003713 BE904832 BU680821 AF088918 AI192192 AI026710 AJ709432 

    GeneLoc Exon Structure


    Expression
    for ATP5J2 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ATP5J2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ACTGGTACGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image

    ATP5J2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    CartilageLumbar Intervertebral DiscIntervertebral Disc Nucleus Pulposus CellsCartilage
    Primitive StreakNotochordPrimitive Streak
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See ATP5J2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ATP5J2

    SOURCE GeneReport for Unigene clusters: Hs.521056 Hs.656515
        SABiosciences Expression via Pathway-Focused PCR Array including ATP5J2: 
              Mitochondrial Energy Metabolism in human mouse rat

    Primer
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    In Situ
    Assay Products:     
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    Orthologs
    for ATP5J2 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of chordates.

    Orthologs for ATP5J2 gene from 4/9 species (see all 9)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Atp5j21 , 5 ATP synthase, H+ transporting, mitochondrial F0 complex, more1, 5 80.68(n)1
    80.68(a)1    		   5 (85.09 cM)5
    574231  NM_020582.21  NP_065607.11 
     1451836985 
    chicken
    (Gallus gallus)    		 Aves ATP5J26
    		 Uncharacterized protein
    		 62(a)
    		 1 ↔ 1
    		 14(4407839-4409184)
    African clawed frog
    (Xenopus laevis)    		 Amphibia 480613312   -- 74.53(n)    48061331 
    zebrafish
    (Danio rerio)    		 Actinopterygii BC059704.12   -- 73.91(n)    BC059704.1 


    ENSEMBL Gene Tree for ATP5J2 (if available)
    TreeFam Gene Tree for ATP5J2 (if available) 

    Paralogs
    for ATP5J2 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ATP5J2 gene
    2 SIMAP similar genes for ATP5J2 using alignment to 6 protein entries:     ATPK_HUMAN (see all proteins):
    ATP5J2-PTCD1    PTCD1

    ATP5J2 for paralogs           About GeneDecksing


    5/15 Pseudogenes.org Pseudogenes for ATP5J2 (see all 15)
    PGOHUM00000242486 PGOHUM00000250982 PGOHUM00000246827 PGOHUM00000237477 PGOHUM00000235084


    Genomic Variants
    for ATP5J2 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/180 NCBI SNPs in ATP5J2 are shown (see all 180)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 7 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs1888994271,2
    		--99055332(+) GAAGCC/GGCCTC 7 -- ds5001 int10--------
    rs1816017891,2
    		--99055370(+) TGGGCA/GTGAGT 7 -- ds5001 int10--------
    rs454543951,2
    		C,--99055404(+) GTGCCG/AGGTCA 7 -- ds5001 int14Minor allele frequency- A:0.12NS CSA WA 214
    rs1864375651,2
    		--99055407(+) CCGGGC/TCACCT 7 -- ds5001 int10--------
    rs771762901,2
    		C--99055414(+) ACCTCA/CCCCTG 7 -- ds5001 int10--------
    rs1466008221,2
    		--99055460(+) GGATGC/TGGGCC 7 -- ds5001 int10--------
    rs1490453741,2
    		C,--99055465(+) GGGCC-/ATC   
       CGAAA    ATCCC     		7 -- ds5001 int10--------
    rs2007787751,2
    		--99055467(+) GCCAT-/CCG   
       AAAAC    CCCTG     		7 -- ds5001 int10--------
    rs1908097741,2
    		--99055495(+) GCCGGA/GGTGGG 7 -- ds5001 int10--------
    rs1483129001,2
    		--99055618(+) ACTTCA/GGCACT 5 -- ds5001 int10--------

    HapMap Linkage Disequilibrium report for ATP5J2 (99046098 - 99063954 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for ATP5J2
         1 CNV: 4548

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    Disorders / Diseases
    for ATP5J2 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    ATP5J2 for disorders           About GeneDecksing

    6 diseases for ATP5J2:    About MalaCards
    complex v    chronic fatigue syndrome    intrahepatic cholangiocarcinoma    cholangiocarcinoma
    alzheimer's disease    prostatitis

    1 disease from the University of Copenhagen DISEASES database for ATP5J2:
    Chronic fatigue syndrome
    Human Genome Epidemiology (HuGE) Navigator: ATP5J2 (2 documents)

    Export disorders for ATP5J2 gene to outside databases

    Publications
    for ATP5J2 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ATP5J2 gene, integrated from 9 sources (see all 30):
    (articles sorted by number of sources associating them with ATP5J2)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of genes expressed in human CD34(+) hematopoietic stem/progenitor cells by expressed sequence tags and efficient full- length cDNA cloning. (PubMed id 9653160)1, 2, 3 Mao M.... Chen Z. (1998)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Human chromosome 7: DNA sequence and biology. (PubMed id 12690205)1, 2 Scherer S.W.... Tsui L.-C. (2003)
    4. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
    5. Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (2011)
    6. Genetic variants in nuclear-encoded mitochondrial gen es influence AIDS progression. (PubMed id 20877624)1 Hendrickson S.L....O'Brien S.J. (2010)
    7. Identification of marker genes for differential diagn osis of chronic fatigue syndrome. (PubMed id 18596870)1 Saiki T....Ban N. (2008)
    8. Serial analysis of the vascular endothelial transcriptome under static and shear stress conditions. (PubMed id 18505769)1 Chu T.J. and Peters D.G. (2008)
    9. Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. (PubMed id 18781797)1 Meierhofer D.... Kaiser P. (2008)
    10. Polymorphisms in mitochondrial genes and prostate can cer risk. (PubMed id 19064571)1 Wang L....Thibodeau S.N. (2008)

    External Searches for ATP5J2 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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    Genome Databases showing ATP5J2 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 9551 HGNC: 848 AceView: ATP5J2 Ensembl:ENSG00000241468 euGenes: HUgn9551
    ECgene: ATP5J2 Kegg: 9551 H-InvDB: ATP5J2

    Other Databases showing ATP5J2 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing ATP5J2 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ATP5J2 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for ATP5J2 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for ATP5J2 gene:
    Search GeneIP for patents involving ATP5J2

    GeneCards and IP:
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