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ATP5C1P1 Gene(Pseudogene)

ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 1 Pseudogene 1

GCID:
GC14M053990
GIFtS:
11

Aliases for ATP5C1P1 Gene

Aliases for ATP5C1P1 Gene

  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 1 Pseudogene 1 2 3 5
  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 2 2 3
  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide-Like 2 3
  • ATP5CL2 3
  • ATP5C2 3

External Ids for ATP5C1P1 Gene

Previous HGNC Symbols for ATP5C1P1 Gene

  • ATP5CL2
  • ATP5C2

Previous GeneCards Identifiers for ATP5C1P1 Gene

  • GC14M054458
  • GC14M034621

Summaries for ATP5C1P1 Gene

GeneCards Summary for ATP5C1P1 Gene

ATP5C1P1 (ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 1 Pseudogene 1) is a Pseudogene. Among its related pathways are Doxorubicin Pathway (Cardiomyocyte Cell), Pharmacodynamics.

Additional gene information for ATP5C1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP5C1P1 Gene

Genomics for ATP5C1P1 Gene

Regulatory Elements for ATP5C1P1 Gene

Enhancers for ATP5C1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H054487 1.1 ENCODE 14.6 -497.4 -497416 3 HDGF PKNOX1 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 ZNF143 ZNF207 ATG14 BMP4 MAPK1IP1L SOCS4 ENSG00000259318 ENSG00000258753 ATP5C1P1 RPL34P28 COX5AP1 ENSG00000258050
GH14H053151 1 ENCODE 14.6 +839.3 839266 3 HDGF PKNOX1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GLIS2 LOC101927620 ENSG00000258993 NDUFB3P3 ATP5C1P1 DDHD1 GC14M053037
GH14H053998 1.4 FANTOM5 Ensembl ENCODE 0.4 -8.2 -8165 3 CTCF PKNOX1 JUN RAD21 ZNF7 TEAD3 HIC1 ZFHX2 CTBP1 GATA3 BMP4 ATP5C1P1 PIR60606
GH14H053978 0.9 ENCODE 0.4 +12.3 12274 2 ELF3 FOXA2 MLX ZFP64 ARID4B RAD21 THRB RARA CREM MIXL1 BMP4 ATP5C1P1
GH14H053962 1.2 Ensembl ENCODE dbSUPER 0.3 +28.7 28672 1 CTCF BMI1 ZBTB7B RAD21 E2F1 CTBP1 GATA3 MAFK EZH2 RFX1 BMP4 ATP5C1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ATP5C1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ATP5C1P1 Gene

Chromosome:
14
Start:
53,990,931 bp from pter
End:
53,992,023 bp from pter
Size:
1,093 bases
Orientation:
Minus strand

Genomic View for ATP5C1P1 Gene

Genes around ATP5C1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP5C1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP5C1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP5C1P1 Gene

Proteins for ATP5C1P1 Gene

Post-translational modifications for ATP5C1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP5C1P1 Gene

Domains & Families for ATP5C1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP5C1P1 Gene

Function for ATP5C1P1 Gene

Phenotypes From GWAS Catalog for ATP5C1P1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ATP5C1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP5C1P1 Gene

Localization for ATP5C1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP5C1P1 Gene

Pathways & Interactions for ATP5C1P1 Gene

genes like me logo Genes that share pathways with ATP5C1P1: view

Pathways by source for ATP5C1P1 Gene

1 PharmGKB pathway for ATP5C1P1 Gene

Interacting Proteins for ATP5C1P1 Gene

Gene Ontology (GO) - Biological Process for ATP5C1P1 Gene

None

No data available for SIGNOR curated interactions for ATP5C1P1 Gene

Drugs & Compounds for ATP5C1P1 Gene

No Compound Related Data Available

Transcripts for ATP5C1P1 Gene

mRNA/cDNA for ATP5C1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ATP5C1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ATP5C1P1 Gene

No ASD Table

Relevant External Links for ATP5C1P1 Gene

GeneLoc Exon Structure for
ATP5C1P1
ECgene alternative splicing isoforms for
ATP5C1P1

Expression for ATP5C1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ATP5C1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ATP5C1P1 Gene

This gene is overexpressed in Heart - Left Ventricle (x18.1), Testis (x10.2), and Muscle - Skeletal (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of ATP5C1P1 Gene:

ATP5C1P1
genes like me logo Genes that share expression patterns with ATP5C1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP5C1P1 Gene

Orthologs for ATP5C1P1 Gene

Evolution for ATP5C1P1 Gene

ENSEMBL:
Gene Tree for ATP5C1P1 (if available)
TreeFam:
Gene Tree for ATP5C1P1 (if available)

No data available for Orthologs for ATP5C1P1 Gene

Paralogs for ATP5C1P1 Gene

No data available for Paralogs for ATP5C1P1 Gene

Variants for ATP5C1P1 Gene

Relevant External Links for ATP5C1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP5C1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP5C1P1 Gene

Disorders for ATP5C1P1 Gene

Relevant External Links for ATP5C1P1

Genetic Association Database (GAD)
ATP5C1P1

No disorders were found for ATP5C1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP5C1P1 Gene

Publications for ATP5C1P1 Gene

  1. Chromosomal localization of genes required for the terminal steps of oxidative metabolism: alpha and gamma subunits of ATP synthase and the phosphate carrier. (PMID: 8168843) Jabs EW … Pedersen PL (Human genetics 1994) 2 3 60
  2. Genome-wide association scan of dental caries in the permanent dentition. (PMID: 23259602) Wang X … Marazita ML (BMC oral health 2012) 3 60
  3. Genome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia. (PMID: 21107309) McClay JL … van den Oord EJ (Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 2011) 45 60
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60

Products for ATP5C1P1 Gene

Sources for ATP5C1P1 Gene

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