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Aliases for ATP5C1P1 Gene

Aliases for ATP5C1P1 Gene

  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 1 Pseudogene 1 2 3 5
  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 2 2 3
  • ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide-Like 2 3
  • ATP5CL2 3
  • ATP5C2 3

External Ids for ATP5C1P1 Gene

Previous HGNC Symbols for ATP5C1P1 Gene

  • ATP5CL2
  • ATP5C2

Previous GeneCards Identifiers for ATP5C1P1 Gene

  • GC14M054458
  • GC14M034621

Summaries for ATP5C1P1 Gene

GeneCards Summary for ATP5C1P1 Gene

ATP5C1P1 (ATP Synthase, H+ Transporting, Mitochondrial F1 Complex, Gamma Polypeptide 1 Pseudogene 1) is a Pseudogene. Among its related pathways are Doxorubicin Pathway (Cardiomyocyte Cell), Pharmacodynamics.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP5C1P1 Gene

Genomics for ATP5C1P1 Gene

Regulatory Elements for ATP5C1P1 Gene

Enhancers for ATP5C1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F054487 0.8 ENCODE 16.2 -497.4 -497416 3.8 HDGF PKNOX1 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 ZNF143 ZNF207 ATG14 SOCS4 ENSG00000258753 ATP5C1P1 RPL34P28 ENSG00000258050 COX5AP1 ENSG00000259318 CGRRF1 CNIH1
GH14F054338 0.6 ENCODE 16.2 -346.9 -346885 0.2 CTCF ESRRA SIN3A RAD21 YY1 ZNF335 SMC3 TCF7L2 RFX1 ZNF654 ENSG00000258753 ATP5C1P1 ENSG00000258050 RPL34P28 COX5AP1 PIR46664 GC14P054217
GH14F053151 0.8 ENCODE 16.2 +839.3 839266 3.5 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF48 ZNF2 LOC101927620 ENSG00000258993 NDUFB3P3 ATP5C1P1 DDHD1 GC14M053037
GH14F053998 1 FANTOM5 Ensembl ENCODE 0.4 -8.2 -8165 3.2 CTCF PKNOX1 JUN ZIC2 RAD21 ZNF7 TEAD3 HIC1 ZFHX2 GATA3 BMP4 ATP5C1P1 PIR60606
GH14F053982 0.4 ENCODE 0.4 +9.4 9437 0.8 POU5F1 ATP5C1P1 BMP4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ATP5C1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ATP5C1P1 Gene

Chromosome:
14
Start:
53,990,931 bp from pter
End:
53,992,023 bp from pter
Size:
1,093 bases
Orientation:
Minus strand

Genomic View for ATP5C1P1 Gene

Genes around ATP5C1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP5C1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP5C1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP5C1P1 Gene

Proteins for ATP5C1P1 Gene

Post-translational modifications for ATP5C1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP5C1P1 Gene

Domains & Families for ATP5C1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP5C1P1 Gene

Function for ATP5C1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP5C1P1 Gene

Localization for ATP5C1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ATP5C1P1 Gene

Pathways & Interactions for ATP5C1P1 Gene

genes like me logo Genes that share pathways with ATP5C1P1: view

Pathways by source for ATP5C1P1 Gene

1 PharmGKB pathway for ATP5C1P1 Gene

Interacting Proteins for ATP5C1P1 Gene

Gene Ontology (GO) - Biological Process for ATP5C1P1 Gene

None

No data available for SIGNOR curated interactions for ATP5C1P1 Gene

Transcripts for ATP5C1P1 Gene

mRNA/cDNA for ATP5C1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ATP5C1P1 Gene

No ASD Table

Relevant External Links for ATP5C1P1 Gene

GeneLoc Exon Structure for
ATP5C1P1
ECgene alternative splicing isoforms for
ATP5C1P1

Expression for ATP5C1P1 Gene

mRNA expression in normal human tissues for ATP5C1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ATP5C1P1 Gene

This gene is overexpressed in Heart - Left Ventricle (x18.1), Testis (x10.2), and Muscle - Skeletal (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of ATP5C1P1 Gene:

ATP5C1P1
genes like me logo Genes that share expression patterns with ATP5C1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ATP5C1P1 Gene

Orthologs for ATP5C1P1 Gene

Evolution for ATP5C1P1 Gene

ENSEMBL:
Gene Tree for ATP5C1P1 (if available)
TreeFam:
Gene Tree for ATP5C1P1 (if available)

No data available for Orthologs for ATP5C1P1 Gene

Paralogs for ATP5C1P1 Gene

No data available for Paralogs for ATP5C1P1 Gene

Variants for ATP5C1P1 Gene

Relevant External Links for ATP5C1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP5C1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP5C1P1 Gene

Disorders for ATP5C1P1 Gene

Relevant External Links for ATP5C1P1

Genetic Association Database (GAD)
ATP5C1P1

No disorders were found for ATP5C1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP5C1P1 Gene

Publications for ATP5C1P1 Gene

  1. Chromosomal localization of genes required for the terminal steps of oxidative metabolism: alpha and gamma subunits of ATP synthase and the phosphate carrier. (PMID: 8168843) Jabs E.W. … Pedersen P.L. (Hum. Genet. 1994) 2 3 64
  2. Genome-wide association scan of dental caries in the permanent dentition. (PMID: 23259602) Wang X. … Marazita M.L. (BMC Oral Health 2012) 3 64
  3. Genome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia. (PMID: 21107309) McClay J.L. … van den Oord E.J. (Neuropsychopharmacology 2011) 46 64
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for ATP5C1P1 Gene

Sources for ATP5C1P1 Gene

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