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ATP2B2 Gene

protein-coding   GIFtS: 63

GC03M010342
ATPase, Ca++ transporting, plasma membrane 2
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
EC 3.6.3.8 3
OTTHUMP00000178534 2
OTTHUMP00000178537 2
PMCA2 1, 2, 3, 5
PMCA2a 2
PMCA2i 2
Descriptions
ATPase, Ca++ transporting, plasma membrane 2 2
Plasma membrane calcium ATPase isoform 2 3
Plasma membrane calcium pump isoform 2 3
plasma membrane Ca(2+)-ATPase 2
plasma membrane Ca2+ pump 2 2
plasma membrane calcium ATPase 2 2
plasma membrane calcium pump 2
External Ids
HGNC: 8151
Entrez Gene: 4912
UniProtKB: Q018143
Ensembl: ENSG000001570877
Search outside databases for aliases for ATP2B2 gene

Previous GC identifers: GC03M010298 GC03M010344

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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EntrezGene summary for ATP2B2:
The protein encoded by this gene belongs to the family of P-type primary ion transport ATPases
characterized by the formation of an aspartyl phosphate intermediate during the reaction cycle.
These enzymes remove bivalent calcium ions from eukaryotic cells against very large concentration
gradients and play a critical role in intracellular calcium homeostasis. The mammalian plasma
membrane calcium ATPase isoforms are encoded by at least four separate genes and the diversity of
these enzymes is further increased by alternative splicing of transcripts. The expression of
different isoforms and splice variants is regulated in a developmental, tissue- and cell
type-specific manner, suggesting that these pumps are functionally adapted to the physiological
needs of particular cells and tissues. This gene encodes the plasma membrane calcium ATPase
isoform 2. Alternatively spliced transcript variants encoding different isoforms have been
identified. [provided by RefSeq]

UniProtKB/Swiss-Prot: AT2B2_HUMAN, Q01814
Function: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the
transport of calcium out of the cell

Gene Wiki entry for ATP2B2

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ATP2B2 gene  

Entrez Gene cytogenetic band: 3p25.3   Ensembl cytogenetic band:  3p25.3   HGNC cytogenetic band: 3p25.3

ATP2B2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03M010342:     (about GC identifiers)

Start:
10,340,707 bp from pter
End:
10,724,716 bp from pter
Size:
384,010 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000003.10  NT_022517.17  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: AT2B2_HUMAN, Q01814 (See protein sequence)
Recommended Name: Plasma membrane calcium-transporting ATPase 2  
Size: 1243 amino acids; 136876 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: O00766 Q12994 Q16818
Alternative splicing: 6 isoforms:  Q01814-1   Q01814-2   Q01814-3   Q01814-4   Q01814-5   Q01814-6   (There is a combination of two alternative spliced domains at N-terminal site A (W, X and Z) and at C-terminal site C (A and B). So far the splice sites have only been studied independently. Experimental confirmation may be lacking for some isoforms)

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001001331.1  NP_001674.2  


    ENSEMBL proteins: 
    ENSP00000380267 ENSP00000342954 ENSP00000373311 ENSP00000353414 ENSP00000344677 ENSP00000324172 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Calcium Pump PMCA2 ATPase, Calcium ATPase, Calcium Pump pan PMCA ATPase)
    Browse Abnova for Human Recombinant Proteins
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    3 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737 cytoplasm IDA15765049
    GO:0005886 plasma membrane NAS1313367
    GO:0016021 integral to membrane IEA--
    About this table

    Antibodies for ATP2B2: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Sigma-Aldrich Antibodies for ATP2B2
    Browse R&D Systems for Antibodies
    Antibodies from Abcam (Calcium Pump PMCA2 ATPase, Calcium ATPase, Calcium Pump pan PMCA ATPase), each with their AbpromiseSM
    Browse Abnova for Monoclonal and Polyclonal Antibodies
    Search Novus for antibodies for ATP2B2

    Assays for ATP2B2: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/8 InterPro domains/families (see all 8 ):
     IPR008250 ATPase_P-typ_ATPase-assoc-reg
     IPR006408 ATPase_P-typ_Ca-transp_PMCA
     IPR006069 ATPase_P-typ_cation-exchng_asu
     IPR004014 ATPase_P-typ_cation-transptr_N
     IPR005834 Dehalogen-like_hydro


       GeneDecks  ATP2B2 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q01814

    ProtoNet protein and cluster: Q01814

    3 Blocks protein families:
    IPB001757 ATPase
    IPB006068 Cation transporting ATPase
    IPB008250 E1-E2 ATPase-associated region


    UniProtKB/Swiss-Prot: AT2B2_HUMAN, Q01814
    Similarity: Belongs to the cation transport ATPase (P-type) family. Type IIB subfamily

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ATP2B2)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ATP2B2)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001001331

                  Applied Biosystems Silencer® siRNAs for ATP2B2

                  Sigma-Aldrich siRNA and siRNA Panels for ATP2B2  
                         Sigma-Aldrich shRNA Panels and shRNA for ATP2B2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001001331
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001001331
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001001331 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_001001331

    UniProtKB/Swiss-Prot: AT2B2_HUMAN, Q01814
    Function: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the
    transport of calcium out of the cell
    Catalytic activity: ATP + H(2)O + Ca(2+)(Cis) = ADP + phosphate + Ca(2+)(Trans)
    Enzyme Number (IUBMB): EC 3.6.3.8 

    Genatlas biochemistry entry for ATP2B2:
    ATPase,Ca++ transporting,B2 plasma membrane,mediating the extrusion of CA2+ from the cell

    7 MGI mutant phenotypes (inferred from 7 alleles(MGI details for Atp2b2):

    behavior/neurologicalcellulargrowth/sizehearing/vestibular/earhomeostasis/metabolism
    nervous systemreproductive system

    5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0000287 magnesium ion binding IEA--
    GO:0005388 calcium-transporting ATPase activity NAS1313367
    GO:0005509 calcium ion binding IEA--
    GO:0005516 calmodulin binding IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


    1 Sigma-Aldrich "Your Favorite Gene" Pathway for  ATP2B2  (Your Favorite Gene powered by Ingenuity) 
     Calcium Signaling

       GeneDecks  ATP2B2 for the pathways selected above  
    About GeneDecksing

    1 Kegg Pathway  (Kegg details for ATP2B2):
     hsa04020 Calcium signaling pathway

       GeneDecks  ATP2B2 for the pathways selected above  
    About GeneDecksing

    5/28 Interacting proteins for ATP2B2 (ENSP000003534143 Q018141, 2) via UniProtKB, MINT, and/or STRING (see all 28 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ATP2B4P236342STRING (score=.961) MINT-5203983
    Dlg1 Dlg1 (xeno)Q626961, 2EBI-1174262, EBI-389325 MINT-73074
    Dlg2 Dlg2 (xeno)Q636221, 2EBI-1174262, EBI-396947 MINT-73075
    Dlg4 Dlg4 (xeno)P310161, 2EBI-1174262, EBI-375655 MINT-73073
    SLC9A3R2 SLC9A3R2 (xeno)Q8SQG91EBI-1174262, EBI-1174758
    About this table

    5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006754 ATP biosynthetic process IEA--
    GO:0006812 cation transport IEA--
    GO:0006816 calcium ion transport IEA--
    GO:0007605 sensory perception of sound IMP15829536
    GO:0008152 metabolic process IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Enzo Life Sciences drugs & compounds for ATP2B2
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for ATP2B2
    1 Novoseek chemical compound relationship for ATP2B2 gene
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    calcium 42.30 14 19365819 (2), 17208398 (1), 7587388 (1), 17999165 (1) (see all 8)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ATP2B2)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ATP2B2)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001001331

                  Sigma-Aldrich siRNA and siRNA Panels for ATP2B2  
                         Sigma-Aldrich shRNA Panels and shRNA for ATP2B2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001001331  NM_001683  

    REFSEQ mRNAs for ATP2B2 gene (2 alternative transcripts): 

    NM_001001331.2   NM_001683.3   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001001331  NM_001683  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001001331
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001001331
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001001331 

    Additional cDNA sequence: 

    AB210008.1 AK308898.1 BC019853.1 BC128575.1 DQ201777.1 DQ201778.1 L00620.1 L20977.1 
    M97260.1 S95738.1 S95743.1 S95758.1 U15688.1 X63575.1 

    10 DOTS entries:

    DT.442590  DT.100746837  DT.101979735  DT.100746836  DT.120861250  DT.40125280  DT.91649950  DT.91725839 
    DT.92416395  DT.97835031 

    24/107 AceView cDNA sequences (see all 107 ):

    T28048 Z98483 AA363898 AI459315 NM_001683 F07516 NM_001001331 BQ718882 
    CB156994 BF108567 BX489007 T07949 AA197323 M97260 AL134596 BE701553 
    BM466549 L00620 AA984150 CK004891 T30695 BM715245 AA324771 AL134595 

    highest scoring ESTs for ATP2B2:

    L20977 X63575 L00620 M97260 AA197252 AA197323 AA324771 AA325402 AA340322 AA363898 

    Unigene Cluster for ATP2B2:

    ATPase, Ca++ transporting, plasma membrane 2
    Hs.268942  [show with all ESTs]
    Unigene Representative Sequence: NM_001001331


    GeneLoc Exon Structure

    5/8 Alternative Splicing Database (ASD) splice patterns (SP) for ATP2B2 (see all 8 )

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11a · 11b ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                -     -     -                                                                                                               
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 23 ^ 24 ^ 25a · 25b
    SP1:                        
    SP2:                        
    SP3:                        
    SP4:  -     -               
    SP5:                        

    About this scheme

    ECgene alternative splicing isoforms for ATP2B2

    6 Ensembl transcripts including schematic representations:
    ENST00000397077  ENST00000342354  ENST00000383800  ENST00000360273  ENST00000343816  ENST00000352432  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ATP2B2 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ATP2B2

    1 / 2 / 3

    14 probe-sets matching ATP2B2 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    37053_at2, 3 U95-A 1 1.00 1.00 0.95 1.07 L20977 1.00 1.00 1.00 1
    59397_at2, 3 U95-C 1 1.00 1.00 0.98 1.15 T47988 0.40 1.00 0.76 1
    41090_s_at2, 3 U95-A 2 1.00 0.97 0.95 0.64 X63575 1.00 1.00 1.00 1
    53627_at2, 3 U95-C 1 0.94 1.00 0.91 1.32 AA002211 0.20 1.00 0.72 1

    204685_s_at2, 3 U133-A 1 1.00 1.00 -- -- R52647 0.60 1.00 0.82 1

    234714_x_at2, 3 U133-B 1 1.00 1.00 -- -- U15688 0.60 1.00 0.82 1

    216120_s_at2, 3 U133-A 1 1.00 1.00 -- -- X63575 1.00 1.00 1.00 1

    211586_s_at2, 3 U133-A 1 1.00 1.00 -- -- M97260 0.80 1.00 0.91 1

    239357_at2, 3 U133-B 1 0.91 1.00 -- -- AA002211 0.20 1.00 0.72 1

    204685_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    234714_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    216120_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    211586_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    239357_at2 U133Plus2 1 0.91 1.00 -- -- -- -- -- -- --
    GeneDecks  ATP2B2 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: GGGTACGTTT

    SOURCE GeneReport for Unigene cluster: Hs.268942

    Expression variation in blood from EXPOLDB for ATP2B2

    UniProtKB/Swiss-Prot: AT2B2_HUMAN, Q01814
    Tissue specificity: Mainly expressed in brain cortex. Found in low levels in skeletal muscle, heart
    muscle, stomach, liver, kidney and lung. Isoforms containing segment B are found in brain cortex
    and at low levels in other tissues. Isoforms containing segments X and W are found at low levels
    in all tissues. Isoforms containing segment A and segment Z are found at low levels in skeletal
    muscle and heart muscle

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ATP2B2 gene from 5/19 species (see all 19 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ATP2B41   -- ATPase, Ca++ transporting, plasma membrane 4 92.27(n)
    97.41(a)
    476535  XM_855984.1  XP_861077.1 
    chimpanzee
    (Pan troglodytes)
    ATP2B21   -- ATPase, Ca++ transporting, plasma membrane 2 96.76(n)
    96.28(a)
    460168  XM_001151685.1  XP_001151685.1 
    cow
    (Bos taurus)
    ATP2B21   -- similar to plasma membrane calcium ATPase 2 93.67(n)
    98.79(a)
    613800  XM_864933.2  XP_870026.2 
    rat
    (Rattus norvegicus)
    Atp2b21   -- ATPase, Ca++ transporting, plasma membrane 2 91.1(n)
    98.75(a)
    24215  NM_012508.3  NP_036640.1 
    mouse
    (Mus musculus)
    Atp2b21, 5 6 (49.50 cM)5
    ATPase, Ca++ transporting, plasma membrane 21, 5 91.76(n)1
    98.83(a)1
    119411  NM_009723.21  NP_033853.11 
     AB0307375  AB0307385  (see all 17)
    About this table        Species with no ortholog for ATP2B2

    ENSEMBL Gene Tree for ATP2B2
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ATP2B2 gene
    ATP2B12  ATP2B32  ATP2B42  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/788 NCBI SNPs in ATP2B2 are shown (see all 788 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 366)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 3 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs356741,2
    A,C,F,H10343577(+) GAGTTC/ATCTGG 2 -- ut31 ese38Minor allele frequency- A:0.17MN EU EA WA NA 876
    rs17195711,2
    A,C,F,H10344180(+) AGCTCA/GGATGC 2 -- ut31 ese35Minor allele frequency- G:0.21MN EU EA WA 596
    rs43273691,2
    A,C,F,H10345486(+) GGCGAC/GAGGGT 2 -- ut31 ese34Minor allele frequency- G:0.48EU EA WA 410
    rs7147371,2
    C,F,H,O10468434(+) AAAGAG/AGCCAT 2 -- ng3120Minor allele frequency- A:0.15NA EA EU WA 1778
    rs348671,2
    A,C,F,H10467025(-) TAAGGA/GTAGTG 2 -- ng3118Minor allele frequency- G:0.43EA NA EU WA 1482
    rs348681,2
    A,C,F,H10467703(-) TTGGAC/GCTGAG 2 -- ng314Minor allele frequency- G:0.47EU EA WA 364
    rs405091,2
    A,C,F,H10467652(-) TCACCA/GTCCTG 2 -- ng314Minor allele frequency- G:0.48EU EA WA 386
    rs2415061,2
    A,C,F,H10342604(+) CCAAAC/GTAGAA 2 -- ut31 ese34Minor allele frequency- G:0.11EU EA WA 414
    rs32096371,2
    C,F,H10343948(-) TGAAAC/TCCTAC 2 -- ut31 ese39Minor allele frequency- N:0.00MN EU EA WA NA 812
    rs141541,2
    A,C,F10343113(+) ACATGG/CAGCAT 2 -- ut31 ese32Minor allele frequency- C:0.50MN 372
    About this table

    HapMap Linkage Disequilibrium images for ATP2B2 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 108733   disorders: 601386  

    Human Gene Mutation Database: ATP2B2

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/42 PubMed articles for ATP2B2 gene (see all 42 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 491 HGNC: 815 AceView: ATP2B2 Ensembl:ENSG00000157087 euGenes: HUgn491
    ECgene: ATP2B2 H-InvDB: ATP2B2
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for ATP2B2:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
      Invitrogen Antibodies  Invitrogen Assays
      Invitrogen Clones  Invitrogen Q-PCR Products
      Invitrogen Human Recombinant Kinases  Invitrogen Custom Antibody and Peptide Service
      Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for ATP2B2-related products

     Millipore Custom Antibody & Bulk Services
     Millipore Preclinical / Clinical Development Services
     Millipore Immunoassay Services
     Millipore Target Screening & Profiling Services


     Predesigned and custom siRNAs for ATP2B2 Antibodies for ATP2B2
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for ATP2B2 Browse small molecules at Sigma-Aldrich
     "Your Favorite Gene" Pathwaysfeedback


      
     Antibodies   Primer Pairs  
     Cell Culture Products   ELISAs  
     Flow Cytometry Kits   Protease Activity Assays & Reagents  
     Cell Selection/Detection Kits & Reagents   ELISA/Assay Development Kits & Reagents  
     Multiplex/Array Assay Kits & Reagents   ELISpot Kits & Development Modules  
     Recombinant & Natural Proteins  

     Search for Recombinant Proteins
     Search for Antibodies
     Chimera RNAi (ATP2B2)
     Custom Service for Mouse Mab
     Custom Service for Rabbit Pab from Full-length Protein
      
     Search for Antibodies & Assays

     Recombinant Proteins
    (Calcium Pump PMCA2 ATPase, Calcium ATPase, Calcium Pump pan PMCA ATPase)
     Antibodies (Calcium Pump PMCA2 ATPase, Calcium ATPase, Calcium Pump pan PMCA ATPase)
     Search OriGene for ATP2B2
     Search Tocris compounds for ATP2B2




     Drugs for ATP2B2
     Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
     Search Novus for antibodies for ATP2B2

    GeneCards Homepage    -    Last full update: 2 Jul 2009        Incremental update: 13 Oct 2009

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