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Aliases for ATP11AUN Gene

Aliases for ATP11AUN Gene

  • ATP11A Upstream Neighbor 2 3 5
  • Putative ATP11A Upstream Neighbor Protein 3 4
  • Small Blood Protein 1 2 3
  • C13orf35 3 4
  • Chromosome 13 Open Reading Frame 35 2
  • Putative Protein ATP11AUN 3
  • SMABLO1 3

External Ids for ATP11AUN Gene

Previous HGNC Symbols for ATP11AUN Gene

  • C13orf35

Previous GeneCards Identifiers for ATP11AUN Gene

  • GC13P113302

Summaries for ATP11AUN Gene

GeneCards Summary for ATP11AUN Gene

ATP11AUN (ATP11A Upstream Neighbor) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP11AUN Gene

Genomics for ATP11AUN Gene

Regulatory Elements for ATP11AUN Gene

Enhancers for ATP11AUN Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F112766 1.3 FANTOM5 Ensembl ENCODE 16.8 +121.2 121157 3.6 HDGF PKNOX1 KLF1 BMI1 ZIC2 RELA ZFHX2 KLF8 CHD2 MTA2 ATP11A ATP11AUN MCF2L ATP11A-AS1 ENSG00000277545
GH13F112709 1.3 Ensembl ENCODE 10.6 +64.9 64900 4.1 PKNOX1 ARNT ZFP64 ARID4B SIN3A ZNF2 FOS ZNF263 SP5 JUNB ATP11A-AS1 ATP11AUN MCF2L TUBGCP3 GC13M112689 PIR54522
GH13F112885 1.2 Ensembl ENCODE 10.6 +238.9 238895 1.1 ARID4B SIN3A FEZF1 ZNF48 RAD21 GLIS2 DEK PAF1 SP3 CEBPB ATP11A ATP11AUN ATP11A-AS1 GC13P112885 MCF2L
GH13F112684 1 ENCODE 11.7 +42.8 42833 9.9 HDGF CREB3L1 ARID4B DMAP1 ZNF48 ZNF121 GLIS2 ELK1 ZNF263 SP3 ATP11AUN ATP11A-AS1 MCF2L ATP11A LOC102725228
GH13F112702 1.1 Ensembl ENCODE 10.6 +57.1 57108 3.3 HDAC1 CBX3 GLIS2 FOS CREM EGR2 ZNF680 CEBPB SMARCA4 KLF16 ATP11A-AS1 ATP11AUN MCF2L ATP11A GC13M112689 PIR54522
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ATP11AUN on UCSC Golden Path with GeneCards custom track

Genomic Location for ATP11AUN Gene

Chromosome:
13
Start:
112,647,044 bp from pter
End:
112,684,497 bp from pter
Size:
37,454 bases
Orientation:
Plus strand

Genomic View for ATP11AUN Gene

Genes around ATP11AUN on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP11AUN Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP11AUN Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP11AUN Gene

Proteins for ATP11AUN Gene

  • Protein details for ATP11AUN Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZP68-ATPUN_HUMAN
    Recommended name:
    Putative protein ATP11AUN
    Protein Accession:
    Q6ZP68

    Protein attributes for ATP11AUN Gene

    Size:
    121 amino acids
    Molecular mass:
    13416 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ATP11AUN Gene

Post-translational modifications for ATP11AUN Gene

No Post-translational modifications

Other Protein References for ATP11AUN Gene

REFSEQ proteins:

No data available for DME Specific Peptides for ATP11AUN Gene

Domains & Families for ATP11AUN Gene

Protein Domains for ATP11AUN Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ATP11AUN: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP11AUN Gene

Function for ATP11AUN Gene

Phenotypes for ATP11AUN Gene

genes like me logo Genes that share phenotypes with ATP11AUN: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP11AUN Gene

Localization for ATP11AUN Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ATP11AUN gene
Compartment Confidence
extracellular 2
cytosol 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ATP11AUN Gene

Pathways & Interactions for ATP11AUN Gene

SuperPathways for ATP11AUN Gene

No Data Available

Interacting Proteins for ATP11AUN Gene

Gene Ontology (GO) - Biological Process for ATP11AUN Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ATP11AUN Gene

Transcripts for ATP11AUN Gene

mRNA/cDNA for ATP11AUN Gene

(1) REFSEQ mRNAs :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATP11AUN Gene

No ASD Table

Relevant External Links for ATP11AUN Gene

GeneLoc Exon Structure for
ATP11AUN
ECgene alternative splicing isoforms for
ATP11AUN

Expression for ATP11AUN Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ATP11AUN Gene

mRNA differential expression in normal tissues according to GTEx for ATP11AUN Gene

This gene is overexpressed in Testis (x14.9) and Whole Blood (x4.8).

Protein differential expression in normal tissues from HIPED for ATP11AUN Gene

This gene is overexpressed in Bone (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ATP11AUN Gene



Protein tissue co-expression partners for ATP11AUN Gene

NURSA nuclear receptor signaling pathways regulating expression of ATP11AUN Gene:

ATP11AUN
genes like me logo Genes that share expression patterns with ATP11AUN: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ATP11AUN Gene

Orthologs for ATP11AUN Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ATP11AUN Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ATP11AUN 34
  • 98.33 (n)
C13orf35 35
  • 94 (a)
OneToOne
Species where no ortholog for ATP11AUN was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ATP11AUN Gene

ENSEMBL:
Gene Tree for ATP11AUN (if available)
TreeFam:
Gene Tree for ATP11AUN (if available)

Paralogs for ATP11AUN Gene

No data available for Paralogs for ATP11AUN Gene

Variants for ATP11AUN Gene

Sequence variations from dbSNP and Humsavar for ATP11AUN Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1041385 -- 112,652,568(-) TTTGG(C/T)GAGTC intron-variant
rs10630668 -- 112,665,721(+) TGTCC(-/AT/GT)GTGTG intron-variant
rs10630669 -- 112,665,774(+) AAGGA(-/TG)TGTGT intron-variant
rs10650853 -- 112,682,628(+) AACCA(-/T)TTTTT intron-variant
rs10677129 -- 112,671,785(+) TTTTT(-/TT)ATGGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ATP11AUN Gene

Variant ID Type Subtype PubMed ID
nsv563228 CNV gain 21841781
nsv563227 CNV gain 21841781
nsv563226 CNV gain 21841781
nsv521686 CNV gain 19592680
nsv518792 CNV loss 19592680
nsv1144701 CNV deletion 24896259
nsv1142841 CNV tandem duplication 24896259
nsv1113612 CNV deletion 24896259
nsv1045238 CNV gain 25217958
nsv1044644 CNV gain 25217958
nsv1037307 CNV gain 25217958
esv3633584 CNV loss 21293372
esv3633583 CNV gain 21293372
esv3352915 CNV duplication 20981092
esv3166 CNV loss 18987735
esv28365 CNV gain+loss 19812545
esv2748170 CNV deletion 23290073
esv2748169 CNV deletion 23290073
esv2748168 CNV deletion 23290073
esv2748167 CNV deletion 23290073
esv2748166 CNV deletion 23290073
esv2748165 CNV deletion 23290073
esv2748164 CNV deletion 23290073
esv2748162 CNV deletion 23290073
esv2669774 CNV deletion 23128226
esv2220906 CNV deletion 18987734
esv1364864 CNV insertion 17803354
esv1056044 CNV insertion 17803354
dgv381e199 CNV deletion 23128226
dgv3417n54 CNV gain 21841781
dgv246e201 CNV deletion 23290073

Variation tolerance for ATP11AUN Gene

Residual Variation Intolerance Score: 77.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.14; 23.11% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ATP11AUN Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP11AUN

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ATP11AUN Gene

Disorders for ATP11AUN Gene

Relevant External Links for ATP11AUN

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ATP11AUN

No disorders were found for ATP11AUN Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP11AUN Gene

Publications for ATP11AUN Gene

  1. Common variants at 10 genomic loci influence hemoglobin Aa88(C) levels via glycemic and nonglycemic pathways. (PMID: 20858683) Soranzo N. … Meigs J.B. (Diabetes 2010) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  3. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A. … Ross M.T. (Nature 2004) 4 64

Products for ATP11AUN Gene

Sources for ATP11AUN Gene

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