Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ATOH7 Gene

protein-coding   GIFtS: 50
GCID: GC10M069990

atonal homolog 7 (Drosophila)

 Explore 5 diseases affiliated with
ATOH7 via our new
 Human Malady Compendium 
Biological research products
for ATOH7
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Atonal Homolog 7 (Drosophila)1 2     Protein Atonal Homolog 72
BHLHa131     ATH53
Math51 2     BHLHA133
Class A Basic Helix-Loop-Helix Protein 132 3     HATH51
Helix-Loop-Helix Protein HATH-52 3     

External Ids:    HGNC: 139071   Entrez Gene: 2202022   Ensembl: ENSG000001797747   OMIM: 6098755   UniProtKB: Q8N1003   

Export aliases for ATOH7 gene to outside databases

Previous GC identifers: GC10M068802 GC10M069077 GC10M069882 GC10M069335 GC10M069334 GC10M069660 GC10M063990


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ATOH7:
This intronless gene encodes a member of the basic helix-loop-helix family of transcription factors, with similarity to
Drosophila atonal gene that controls photoreceptor development. Studies in mice suggest that this gene plays a central
role in retinal ganglion cell and optic nerve formation. Mutations in this gene are associated with nonsyndromic
congenital retinal nonattachment. (provided by RefSeq, Dec 2011)

UniProtKB/Swiss-Prot: ATOH7_HUMAN, Q8N100
Function: Transcription factor involved in the differentiation of retinal ganglion cells (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NC_018921.1  NT_030059.13  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ATOH7 gene promoter:
         USF1   RP58   NF-E2 p45   Tal-1beta   SRY   HOXA5   ITF-2   NF-E2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidATOH7 promoter sequence
   Search SABiosciences Chromatin IP Primers for ATOH7

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ATOH7


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q21.3|10q21.3-q22.1   Ensembl cytogenetic band:  10q21.3   HGNC cytogenetic band: 10q22.2

ATOH7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ATOH7 gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M069990:  view genomic region     (about GC identifiers)

Start:
69,990,381 bp from pter      End:
69,991,871 bp from pter
Size:
1,491 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ATOH7_HUMAN, Q8N100 (See protein sequence)
Recommended Name: Protein atonal homolog 7  
Size: 152 amino acids; 16871 Da
Subcellular location: Nucleus (Probable)

Explore the universe of human proteins at neXtProt for ATOH7: NX_Q8N100

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8N100

  • ATOH7 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_660161.1  
    ENSEMBL proteins: 
     ENSP00000362777  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for ATOH7 
    GenScript Custom Purified and Recombinant Proteins Services for ATOH7
    Novus Biologicals ATOH7 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for ATOH7

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--


    ATOH7 for ontologies           About GeneDecksing



    ATOH7 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of ATOH7
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for ATOH7 
    GenScript Custom Superior Antibodies Services for ATOH7
    Novus Biologicals ATOH7 Antibodies
    Search for Antibodies for ATOH7 at Abcam  
    Uscn Antibodies for ATOH7
    Search ThermoFisher Antibodies for ATOH7

    Assay Products for ATOH7: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for ATOH7
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for ATOH7


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    ATOH7 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR011598 HLH_dom

    Graphical View of Domain Structure for InterPro Entry Q8N100

    ProtoNet protein and cluster: Q8N100

    1 Blocks protein family: IPB001092 Basic helix-loop-helix dimerization domain bHLH

    UniProtKB/Swiss-Prot: ATOH7_HUMAN, Q8N100
    Similarity: Contains 1 bHLH (basic helix-loop-helix) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: ATOH7_HUMAN, Q8N100
    Function: Transcription factor involved in the differentiation of retinal ganglion cells (By similarity)

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ATOH7
    5 QIAGEN miScript miRNA Assays for microRNAs that regulate ATOH7:
    hsa-miR-3658 hsa-miR-1283 hsa-miR-561 hsa-miR-3921 hsa-miR-1224-5p
    SwitchGear 3'UTR luciferase reporter plasmidATOH7 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ATOH7 (see all 4)
    OriGene shRNA RFP: ATOH7
    OriGene siRNA: ATOH7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ATOH7

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for ATOH7

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: ATOH7 (NM_145178)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ATOH7
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ATOH7 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for ATOH7
    Search LifeMap BioReagents cell lines for ATOH7

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ATOH7

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding IEA--
    GO:0046983protein dimerization activity IEA--


    ATOH7 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for ATOH7:
     Increased gamma-H2AX phosphory 

    Animal Models:
         7 MGI mutant phenotypes (inferred from 7 alleles(MGI details for Atoh7):
     behavior/neurological  cardiovascular system  cellular  nervous system  normal 
     reproductive system  vision/eye 

    ATOH7 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Transcription factors in neurogenesis
    Transcription factors in neurogenesis1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for ATOH7
        Transcription factors in neurogenesis




    ATOH7 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ATOH7

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--
    GO:0007399nervous system development IEA--
    GO:0007623circadian rhythm IEA--
    GO:0009649entrainment of circadian clock IEA--


    ATOH7 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ATOH7
    Search CenterWatch for drugs/clinical trials and news about ATOH7 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ATOH7 gene: 
    NM_145178.3  

    Unigene Cluster for ATOH7:

    Atonal homolog 7 (Drosophila)
    Hs.737072  [show with all ESTs]
    Unigene Representative Sequence: NM_145178
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000373673(uc001jnq.3)

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ATOH7
    5 QIAGEN miScript miRNA Assays for microRNAs that regulate ATOH7:
    hsa-miR-3658 hsa-miR-1283 hsa-miR-561 hsa-miR-3921 hsa-miR-1224-5p
    SwitchGear 3'UTR luciferase reporter plasmidATOH7 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ATOH7 (see all 4)
    OriGene shRNA RFP: ATOH7
    OriGene siRNA: ATOH7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ATOH7
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: ATOH7 (NM_145178)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ATOH7
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ATOH7 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ATOH7
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ATOH7
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ATOH7
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ATOH7

    Additional cDNA sequence: 

    AB593108.1 AB593109.1 BC032621.1 

    1 DOTS entry:

    DT.97784371 

    7 AceView cDNA sequences:

    NM_145178 BK000277 BM474709 BC032621 AI799665 H05728 BU151599 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ATOH7 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGTATCGGTG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    ATOH7 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    3 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EyeGanglion Cell LayerGanglion Precursor CellsGanglion, Retina
    EyeNeuroblastic LayerEarly Retinal Progenitor CellsRetina
    EyeNeuroblastic LayerLate Retinal Progenitor CellsRetina
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Retinal progenitor-like cells (Generation of retina...)

    See ATOH7 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ATOH7

    SOURCE GeneReport for Unigene cluster: Hs.737072
        SABiosciences Custom PCR Arrays for ATOH7
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ATOH7
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ATOH7
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ATOH7
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ATOH7
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ATOH7

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for ATOH7 gene from 6/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves ATOH71 atonal homolog 7 (Drosophila) 62.44(n)
    64(a)
      395388  NM_204668.1  NP_989999.1 
    lizard
    (Anolis carolinensis)
    Reptilia ATOH76
    --
    60(a)
    1 ↔ 1
    GL343215.1(1447009-1447458)
    African clawed frog
    (Xenopus laevis)
    Amphibia atoh5b-A2 atonal homolog 5b 74.68(n)    U93171.1 
    zebrafish
    (Danio rerio)
    Actinopterygii atoh72 atonal homolog 7 82.39(n)   58216  AB049457.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta cato6
    amos6
    (see all 3)
    absent MD neurons and olfactory sensilla
    (see all 3)
    22(a)
    21(a)
    (see all 3)
    many ↔ many
    many ↔ many
    (see all 3)
    2R(12165294-12165902)
    2L(18596047-18597200)
    worm
    (Caenorhabditis elegans)
    Secernentea lin-326
    Protein lin-32
    26(a)
    1 → many
    X(2229116-2230094)


    ENSEMBL Gene Tree for ATOH7 (if available)
    TreeFam Gene Tree for ATOH7 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ATOH7 gene
    NEUROG32  FERD3L2  NEUROD22  NEUROD12  NEUROD62  ATOH12  NEUROG22  BHLHA152  
    PTF1A2  NEUROG12  NEUROD42  
    8 SIMAP similar genes for ATOH7 using alignment to 2 protein entries:     ATOH7_HUMAN (see all proteins):
    ATOH1    TAL2    NEUROD2    NEUROD6    NEUROD4    TCF15
    SCXA    SCXB

    ATOH7 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/47 NCBI SNPs in ATOH7 are shown (see all 47    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 10 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs732691661,2
    C,--63989927(+) AGGAAC/GTACTA 1 -- ds50012Minor allele frequency- G:0.06WA 120
    rs732691671,2
    C,--63990390(+) TCCCTC/GAAAGT 1 -- ut312Minor allele frequency- G:0.07WA 120
    rs64803191,2
    C,A,--63991324(+) TCTACT/CGGATG 1 -- ut51 ese32Minor allele frequency- C:0.25CSA WA 120
    rs64803201,2
    C,F,A,H,--63991373(+) AAAATG/AANNNN 1 -- ut5113Minor allele frequency- A:0.15NS EA NA WA CSA 1484
    rs732691751,2
    C,--63992474(+) TTCAGT/ATGTGT 1 -- us2k12Minor allele frequency- A:0.17WA 120
    rs782955291,2
    F,--63992775(+) TAACCG/ATGACT 1 -- us2k11Minor allele frequency- A:0.03EA 120
    rs732691771,2
    C,--63992946(+) TCTCCA/CGCATG 1 -- us2k12Minor allele frequency- C:0.07WA 120
    rs727954591,2
    C,--63993348(+) AAATAC/TTACTG 1 -- us2k10--------
    rs1876104941,2
    --69989852(+) TTGCTC/TCCATT 1 -- ds50010--------
    rs1146923161,2
    F,--69989949(+) TTCTGT/GGTTAG 1 -- ds50011Minor allele frequency- G:0.08WA 118

    HapMap Linkage Disequilibrium report for ATOH7 (69990381 - 69991871 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for ATOH7: --
    Human Gene Mutation Database (HGMD): ATOH7

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ATOH7
    DNA2.0 Custom Variant and Variant Library Synthesis for ATOH7

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ATOH7 for disorders           About GeneDecksing

    OMIM gene information: 609875    OMIM disorders: --

    UniProtKB/Swiss-Prot: ATOH7_HUMAN, Q8N100
  • Defects in ATOH7 are the cause of retinal non-attachment congenital non-syndromic (RNANC) [MIM:221900]. A
  • condition characterized by separation of the inner layers of the retina (neural retina) from the pigment epithelium.
    Clinical findings include lack of perception of light, massive retrolental mass, shallow anterior chamber, and
    nystagmus in otherwise normal individuals. Note=RNANC is caused by a 6.5 kb deletion that spans a remote cis
    regulatory element 20 kb upstream from ATOH7

    5 diseases for ATOH7:    About MalaCards
    retinal nonattachment    retinitis    nystagmus    glaucoma
    neuronitis

    1 disease from the University of Copenhagen DISEASES database for ATOH7:
    Glaucoma
    Human Genome Epidemiology (HuGE) Navigator: ATOH7 (4 documents)

    Export disorders for ATOH7 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ATOH7 gene, integrated from 9 sources (see all 16):
    (articles sorted by number of sources associating them with ATOH7)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular characterization and mapping of ATOH7, a human atonal homolog with a predicted role in retinal ganglion cell development. (PubMed id 11889557)1, 2, 3, 9 Brown N.L.... Glaser T. (2002)
    2. Deletion of a remote enhancer near ATOH7 disrupts ret inal neurogenesis, causing NCRNA disease. (PubMed id 21441919)1, 2 Ghiasvand N.M....Glaser T. (2011)
    3. Exhaustive identification of human class II basic helix-loop-helix proteins by virtual library screening. (PubMed id 14516699)1, 2 McLellan A.S.... Kealey T. (2002)
    4. Next generation sequencing identifies mutations in Ato nal homolog 7 (ATOH7) in families with global eye developmental defects. (PubMed id 22068589)1 Khan K....Ali M. (2012)
    5. Interactive effects of ATOH7 and RFTN1 in association with adult-onset primary open-angle glaucoma. (PubMed id 22222511)1 Chen J.H....Zhang M. (2012)
    6. ATOH7 mutations cause autosomal recessive persistent h yperplasia of the primary vitreous. (PubMed id 22645276)1 Prasov L....Glaser T. (2012)
    7. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PubMed id 21697133)1 Oshikawa M.... Kato S. (2011)
    8. Genome-wide association studies in Asians confirm the involvement of ATOH7 and TGFBR3, and further identify CARD10 as a novel locus influencing optic disc area. (PubMed id 21307088)1 Khor C.C....Aung T. (2011)
    9. Common genetic variants associated with open-angle gl aucoma. (PubMed id 21427129)1 Ramdas W.D....van Duijn C.M. (2011)
    10. Focus on Molecules: Math5 and retinal ganglion cells. (PubMed id 22019371)1 Sapkota D....Mu X. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 220202 HGNC: 13907 AceView: ATOH7 Ensembl:ENSG00000179774 euGenes: HUgn220202
    ECgene: ATOH7 H-InvDB: ATOH7

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ATOH7 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ATOH7 gene:
    Search GeneIP for patents involving ATOH7

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     Browse Small Molecules at EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of ATOH7
     Browse Purified and Recombinant Proteins at EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for ATOH7  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ATOH7   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ATOH7  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for ATOH7   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ATOH7  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for ATOH7   OriGene Custom Protein Services for ATOH7  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ATOH7
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ATOH7
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ATOH7
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ATOH7
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ATOH7
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ATOH7
     GenScript Custom Purified and Recombinant Proteins Services for ATOH7 GenScript cDNA clones with any tag delivered in your preferred vector for ATOH7
     GenScript Custom Assay Services for ATOH7 GenScript Custom Superior Antibodies Services for ATOH7
     GenScript Custom overexpressing Cell Line Services for ATOH7 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in ATOH7 promoter
     Search Chromatin IP Primers for ATOH7
     RT2 qPCR Primer Assay in human, mouse, rat ATOH7
     Search GNC Networks for ATOH7
     SABiosciences Custom PCR Arrays for ATOH7
     Search Tocris compounds for ATOH7
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     ATOH7 antibodies
     ATOH7 lysates
     Search for Antibodies for ATOH7 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for ATOH7
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     ATOH7 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for ATOH7
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ATOH7
     SwitchGear 3'UTR luciferase reporter plasmids for ATOH7
     SwitchGear Promoter luciferase reporter plasmids for ATOH7
     Search ThermoFisher Antibodies for ATOH7
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ATOH7
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      ATOH7 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4