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Aliases for ATG10-IT1 Gene

Subcategory (RNA class) for ATG10-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for ATG10-IT1 Gene

  • ATG10 Intronic Transcript 1 2 3 5
  • ATG10 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ATG10-IT1 Gene

ORGUL Members for ATG10-IT1 Gene

Previous GeneCards Identifiers for ATG10-IT1 Gene

  • GC00U933538
  • GC05P081288

Summaries for ATG10-IT1 Gene

GeneCards Summary for ATG10-IT1 Gene

ATG10-IT1 (ATG10 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATG10-IT1 Gene

Genomics for ATG10-IT1 Gene

Regulatory Elements for ATG10-IT1 Gene

Enhancers for ATG10-IT1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ATG10-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ATG10-IT1 Gene

Chromosome:
5
Start:
81,991,995 bp from pter
End:
81,992,481 bp from pter
Size:
487 bases
Orientation:
Plus strand

Genomic View for ATG10-IT1 Gene

Genes around ATG10-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATG10-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATG10-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ATG10-IT1 Gene

Proteins for ATG10-IT1 Gene

Post-translational modifications for ATG10-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATG10-IT1 Gene

Domains & Families for ATG10-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATG10-IT1 Gene

Function for ATG10-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATG10-IT1 Gene

Localization for ATG10-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ATG10-IT1 Gene

Pathways & Interactions for ATG10-IT1 Gene

SuperPathways for ATG10-IT1 Gene

No Data Available

Interacting Proteins for ATG10-IT1 Gene

Gene Ontology (GO) - Biological Process for ATG10-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ATG10-IT1 Gene

Drugs & Compounds for ATG10-IT1 Gene

No Compound Related Data Available

Transcripts for ATG10-IT1 Gene

mRNA/cDNA for ATG10-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ATG10-IT1 Gene

No ASD Table

Relevant External Links for ATG10-IT1 Gene

GeneLoc Exon Structure for
ATG10-IT1
ECgene alternative splicing isoforms for
ATG10-IT1

Expression for ATG10-IT1 Gene

mRNA expression in normal human tissues for ATG10-IT1 Gene

genes like me logo Genes that share expression patterns with ATG10-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ATG10-IT1 Gene

Orthologs for ATG10-IT1 Gene

Evolution for ATG10-IT1 Gene

ENSEMBL:
Gene Tree for ATG10-IT1 (if available)
TreeFam:
Gene Tree for ATG10-IT1 (if available)

No data available for Orthologs for ATG10-IT1 Gene

Paralogs for ATG10-IT1 Gene

No data available for Paralogs for ATG10-IT1 Gene

Variants for ATG10-IT1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ATG10-IT1 Gene

Disorders for ATG10-IT1 Gene

No disorders were found for ATG10-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATG10-IT1 Gene

Publications for ATG10-IT1 Gene

No publications were found for ATG10-IT1 Gene.

Products for ATG10-IT1 Gene

Sources for ATG10-IT1 Gene

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