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Aliases for ASS1P13 Gene

Aliases for ASS1P13 Gene

  • Argininosuccinate Synthetase 1 Pseudogene 13 2 3
  • Argininosuccinate Synthetase Pseudogene 13 2 3
  • RP11-382M14.1 5
  • ASSP13 3

External Ids for ASS1P13 Gene

Previous HGNC Symbols for ASS1P13 Gene

  • ASSP13

Previous GeneCards Identifiers for ASS1P13 Gene

  • GC11P107047

Summaries for ASS1P13 Gene

GeneCards Summary for ASS1P13 Gene

ASS1P13 (Argininosuccinate Synthetase 1 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASS1P13 Gene

Genomics for ASS1P13 Gene

Regulatory Elements for ASS1P13 Gene

Enhancers for ASS1P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G107396 0.6 ENCODE 10.9 +221.2 221203 1.2 ZFHX2 NFIC NFIB SCRT2 NFE2 MAFK EGR2 LOC105369477 ASS1P13 CWF19L2 SMARCE1P1
GH11G107456 1 ENCODE 5.9 +281.5 281524 1.5 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 ETS1 SLC30A9 ELK1 CBX5 LOC105369477 CWF19L2 ASS1P13 SMARCE1P1
GH11G107927 1 ENCODE 5.4 +752.4 752372 2.0 PKNOX1 ATF1 SIN3A ZNF2 ZNF121 GLIS2 ZNF143 ZNF207 KLF7 FOS CUL5 DDX10 SLC35F2 ASS1P13 RAB39A
GH11G107408 0.9 ENCODE 5.4 +232.8 232826 0.9 ELF3 HNRNPUL1 FOXA2 ARID4B RARA CREM MIXL1 THAP11 PPARG KAT8 ASS1P13 SMARCE1P1 CWF19L2
GH11G107385 0.7 ENCODE 5.9 +209.8 209750 1.5 SOX13 SAP130 CEBPG TEAD3 ZNF316 MAFK MIXL1 SOX5 TEAD1 FOXA3 CWF19L2 LOC105369477 ASS1P13 SMARCE1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ASS1P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for ASS1P13 Gene

Chromosome:
11
Start:
107,176,212 bp from pter
End:
107,177,767 bp from pter
Size:
1,556 bases
Orientation:
Plus strand

Genomic View for ASS1P13 Gene

Genes around ASS1P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASS1P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASS1P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASS1P13 Gene

Proteins for ASS1P13 Gene

Post-translational modifications for ASS1P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASS1P13 Gene

Domains & Families for ASS1P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASS1P13 Gene

Function for ASS1P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASS1P13 Gene

Localization for ASS1P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ASS1P13 Gene

Pathways & Interactions for ASS1P13 Gene

SuperPathways for ASS1P13 Gene

No Data Available

Interacting Proteins for ASS1P13 Gene

Gene Ontology (GO) - Biological Process for ASS1P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ASS1P13 Gene

Transcripts for ASS1P13 Gene

mRNA/cDNA for ASS1P13 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ASS1P13 Gene

No ASD Table

Relevant External Links for ASS1P13 Gene

GeneLoc Exon Structure for
ASS1P13
ECgene alternative splicing isoforms for
ASS1P13

Expression for ASS1P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ASS1P13 Gene

mRNA differential expression in normal tissues according to GTEx for ASS1P13 Gene

This gene is overexpressed in Testis (x7.7).

NURSA nuclear receptor signaling pathways regulating expression of ASS1P13 Gene:

ASS1P13
genes like me logo Genes that share expression patterns with ASS1P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASS1P13 Gene

Orthologs for ASS1P13 Gene

Evolution for ASS1P13 Gene

ENSEMBL:
Gene Tree for ASS1P13 (if available)
TreeFam:
Gene Tree for ASS1P13 (if available)

No data available for Orthologs for ASS1P13 Gene

Paralogs for ASS1P13 Gene

No data available for Paralogs for ASS1P13 Gene

Variants for ASS1P13 Gene

Relevant External Links for ASS1P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASS1P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ASS1P13 Gene

Disorders for ASS1P13 Gene

Relevant External Links for ASS1P13

Genetic Association Database (GAD)
ASS1P13

No disorders were found for ASS1P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASS1P13 Gene

Publications for ASS1P13 Gene

  1. Human chromosomal assignments for 14 argininosuccinate synthetase pseudogenes: cloned DNAs as reagents for cytogenetic analysis. (PMID: 6093508) Su T.S. … Beaudet A.L. (Am. J. Hum. Genet. 1984) 2 3 64
  2. Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PMID: 17362836) Schymick J.C. … Traynor B.J. (Lancet Neurol 2007) 46 64

Products for ASS1P13 Gene

Sources for ASS1P13 Gene

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