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Aliases for ASS1P1 Gene

Aliases for ASS1P1 Gene

  • Argininosuccinate Synthetase 1 Pseudogene 1 2 3 5
  • Argininosuccinate Synthetase Pseudogene 1 2 3
  • ASSP1 3

External Ids for ASS1P1 Gene

Previous HGNC Symbols for ASS1P1 Gene

  • ASSP1

Previous GeneCards Identifiers for ASS1P1 Gene

  • GC06M025024
  • GC06M024965

Summaries for ASS1P1 Gene

GeneCards Summary for ASS1P1 Gene

ASS1P1 (Argininosuccinate Synthetase 1 Pseudogene 1) is a Pseudogene. Diseases associated with ASS1P1 include Interferon, Beta-3.

Additional gene information for ASS1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASS1P1 Gene

Genomics for ASS1P1 Gene

GeneHancer (GH) Regulatory Elements for ASS1P1 Gene

Promoters and enhancers for ASS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I025024 Enhancer 0.3 dbSUPER 550.8 -0.3 -347 0.7 ATF7 ASS1P1 RN7SL334P LOC102724765 ENSG00000272053 RIPOR2
GH06I025025 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.8 -2768 2.9 CTCF BACH1 EBF1 RAD21 ZNF316 FOXK2 ZNF143 BCLAF1 RUNX3 SMARCA5 CMAHP TRIM38 RIPOR2 ASS1P1 RN7SL334P LOC102724765 ENSG00000272053
GH06I025005 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.5 16467 4.6 ATF1 BATF YY1 FOS ETV6 ATF7 IKZF2 RUNX3 RXRA JUNB RIPOR2 C6orf62 GPLD1 TDP2 ASS1P1 PPIAP29
GH06I025013 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +8.4 8358 4.9 CTCF MXI1 MAX BMI1 RAD21 CC2D1A POLR2A SCRT2 ZNF143 SMC3 RIPOR2 GPLD1 ASS1P1 LOC102724765 ENSG00000272053 PPIAP29
GH06I025012 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.5 11518 1.3 CTCF YY2 JUN CEBPB CEBPG EP300 BRCA1 RAD21 JUND STAT3 GPLD1 ASS1P1 RIPOR2 PPIAP29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ASS1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ASS1P1 Gene

Genomic Locations for ASS1P1 Gene
chr6:25,023,009-25,024,591
(GRCh38/hg38)
Size:
1,583 bases
Orientation:
Minus strand
chr6:25,023,237-25,024,819
(GRCh37/hg19)

Genomic View for ASS1P1 Gene

Genes around ASS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASS1P1 Gene

Proteins for ASS1P1 Gene

Post-translational modifications for ASS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASS1P1 Gene

Domains & Families for ASS1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASS1P1 Gene

Function for ASS1P1 Gene

Phenotypes From GWAS Catalog for ASS1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASS1P1 Gene

Localization for ASS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ASS1P1 Gene

Pathways & Interactions for ASS1P1 Gene

SuperPathways for ASS1P1 Gene

No Data Available

Interacting Proteins for ASS1P1 Gene

Gene Ontology (GO) - Biological Process for ASS1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ASS1P1 Gene

Drugs & Compounds for ASS1P1 Gene

No Compound Related Data Available

Transcripts for ASS1P1 Gene

mRNA/cDNA for ASS1P1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ASS1P1 Gene

No ASD Table

Relevant External Links for ASS1P1 Gene

GeneLoc Exon Structure for
ASS1P1
ECgene alternative splicing isoforms for
ASS1P1

Expression for ASS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ASS1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ASS1P1 Gene

This gene is overexpressed in Pituitary (x27.4), Whole Blood (x5.5), and Testis (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of ASS1P1 Gene:

ASS1P1
genes like me logo Genes that share expression patterns with ASS1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASS1P1 Gene

Orthologs for ASS1P1 Gene

Evolution for ASS1P1 Gene

ENSEMBL:
Gene Tree for ASS1P1 (if available)
TreeFam:
Gene Tree for ASS1P1 (if available)

No data available for Orthologs for ASS1P1 Gene

Paralogs for ASS1P1 Gene

No data available for Paralogs for ASS1P1 Gene

Variants for ASS1P1 Gene

Additional Variant Information for ASS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ASS1P1 Gene

Disorders for ASS1P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ASS1P1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
interferon, beta-3
  • ifnb3
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ASS1P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ASS1P1 Gene

Publications for ASS1P1 Gene

  1. New chromosomal mapping assignments for argininosuccinate synthetase pseudogene 1, interferon-beta 3 gene, and the diazepam binding inhibitor gene. (PMID: 1440058) Todd S … Naylor SL (Somatic cell and molecular genetics 1992) 2 3 58
  2. Human chromosomal assignments for 14 argininosuccinate synthetase pseudogenes: cloned DNAs as reagents for cytogenetic analysis. (PMID: 6093508) Su TS … Beaudet AL (American journal of human genetics 1984) 2 3 58
  3. Molecular structures of human argininosuccinate synthetase pseudogenes. Evolutionary and mechanistic implications. (PMID: 6321498) Freytag SO … O'Brien WE (The Journal of biological chemistry 1984) 3 58

Products for ASS1P1 Gene

Sources for ASS1P1 Gene

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