ASPSCR1 Gene
protein-coding GIFtS: 57
GCID: GC17P079935
|
|
alveolar soft part sarcoma chromosome region, candidate...
| |
Aliases
for ASPSCR1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Alveolar Soft Part Sarcoma Chromosome Region, Candidate 11 2 | | Renal Papillary Cell Carcinoma Protein 172 3 | | ASPL1 2 3 5 | | TUG2 3 | | UBXD91 2 3 | | UBX Domain-Containing Protein 92 3 | | UBXN91 2 3 | | ASPCR12 | | ASPS1 2 5 | | Renal Cell Carcinoma Gene On Chromosome 172 | | RCC172 3 5 | | Renal Cell Carcinoma, Papillary, 172 | | Alveolar Soft Part Sarcoma Chromosomal Region Candidate Gene 1 Protein2 3 | | Tether Containing UBX Domain For GLUT42 | | Alveolar Soft Part Sarcoma Locus2 3 | | UBX Domain Protein 92 |
Export aliases for ASPSCR1 gene to outside databasesPrevious GC identifers: GC17M079495 GC17M9J0113 GC17P080471 GC17P080614 GC17P077529 GC17P075336 |
Summaries
for ASPSCR1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for ASPSCR1:
The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4). Thisprotein is a tether, which sequesters the GLUT4 in intracellular vesicles in muscle and fat cells in the absence ofinsulin, and redistributes the GLUT4 to the plasma membrane within minutes of insulin stimulation. Translocationt(X;17)(p11;q25) of this gene with transcription factor TFE3 gene results in a ASPSCR1-TFE3 fusion protein in alveolarsoft part sarcoma and in renal cell carcinomas. Multiple alternatively spliced transcript variants have been found.(provided by RefSeq, Oct 2011)
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9Function: Tethering protein that sequesters GLUT4-containing vesicles in the cytoplasm in the absence of insulin.Modulates the amount of GLUT4 that is available at the cell surface (By similarity)
Gene Wiki entry for ASPSCR1
|
Genomic Views
for ASPSCR1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000017.10 NC_018928.1 NT_010663.15
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ASPSCR1 gene promoter:
E2F-4 E2F-3a E2F-5 E2F E2F-1 p53 E2F-2 YY1
Other transcription factors
Search SABiosciences Chromatin IP Primers for ASPSCR1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ASPSCR1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 17q25.3 Ensembl cytogenetic band: 17q25.3 HGNC cytogenetic band: 17q25ASPSCR1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17P079935: view genomic region
(about GC identifiers)
Start:
|
79,934,683 bp from pter |
End:
|
79,975,282 bp from pter |
Size:
|
40,600 bases |
Orientation:
|
plus strand |
|
Proteins
for ASPSCR1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9 (See
protein sequence)Recommended Name: Tether containing UBX domain for GLUT4 Size: 553 amino acids; 60183 Da
Subunit: Interacts with GLUT4 (By similarity)
Subcellular location: Endomembrane system; Peripheral membrane protein (By similarity)
Secondary accessions: A8K3K9 Q7Z6N7 Q8WV59 Q96LS5 Q96M40Alternative splicing: 4 isoforms: Q9BZE9-1 Q9BZE9-2 Q9BZE9-3 Q9BZE9-4 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for ASPSCR1: NX_Q9BZE9
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q9BZE9
ASPSCR1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (2 alternative transcripts):
NP_001238817.1 NP_076988.1
ENSEMBL proteins: ENSP00000463316 ENSP00000306625 ENSP00000302176 ENSP00000344020 ENSP00000464408 ENSP00000462329 ENSP00000464044 ENSP00000461984 ENSP00000463708 ENSP00000463992 ENSP00000462218 ENSP00000461980 Reactome Protein details: Q9BZE9
Human Recombinant Protein Products:
Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8): About this table
ASPSCR1 for ontologies About GeneDecksing
ASPSCR1 Antibody Products:
Assay Products for ASPSCR1: |
Protein
Domains /
Families
for ASPSCR1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ASPSCR1 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q9BZE9ProtoNet protein and cluster: Q9BZE9 1 Blocks protein family: IPB001012 UBX domain
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9Similarity: Contains 1 UBX domain |
Function
for ASPSCR1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9Function: Tethering protein that sequesters GLUT4-containing vesicles in the cytoplasm in the absence of insulin.Modulates the amount of GLUT4 that is available at the cell surface (By similarity)
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1 (see all 4)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: ASPSCR1 (NM_024083) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ASPSCR1 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ASPSCR1 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ASPSCR1 |
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table
ASPSCR1 for ontologies About GeneDecksing
|
Pathways & Interactions
for ASPSCR1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Membrane Trafficking | | | 2 | Fusion of GLUT4 Vesicle with the Plasma Membrane | | | 3 | Glucose / Energy Metabolism | |
Pathway sources
See GeneCards unified pathways
Show all pathways
1 
Cell Signaling Technology (CST) Pathway for ASPSCR1
3 
Reactome Pathways for ASPSCR1
ASPSCR1 for pathways About GeneDecksing
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ASPSCR1
STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)
5/26 Interacting proteins for ASPSCR1 (Q9BZE91, 2, 3 ENSP000003021764) via UniProtKB, MINT, STRING, and/or I2D (see all 26)About this table
Gene Ontology (GO): 4 biological process terms (GO ID links to tree view): About this table
ASPSCR1 for ontologies About GeneDecksing
|
Drugs & Compounds
for ASPSCR1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for ASPSCR1
Search CenterWatch for drugs/clinical trials and news about ASPSCR1 / ASPC1
|
Transcripts
for ASPSCR1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for ASPSCR1 gene (2 alternative transcripts): NM_001251888.1 NM_024083.3 Unigene Cluster for ASPSCR1: Alveolar soft part sarcoma chromosome region, candidate 1 Hs.298351 [show with all ESTs]Unigene Representative Sequence: NM_00125188818/21 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 21): ENST00000581484 ENST00000306729(uc002kcy.3) ENST00000306739(uc002kcx.3 uc021ufj.1 uc002kda.3)
ENST00000344865 ENST00000581647 ENST00000580534 ENST00000583503 ENST00000579684
ENST00000582019 ENST00000584454(uc002kdb.1) ENST00000582355 ENST00000577733
ENST00000578236 ENST00000581608 ENST00000585274 ENST00000583744 ENST00000578361
ENST00000583142
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1 (see all 4)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: ASPSCR1 (NM_024083) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ASPSCR1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ASPSCR1 |
Additional cDNA sequence: AF324219.2 AK057403.1 AK057851.1 AK226086.1 AK290624.1 BC006152.1 BC018722.1 NR_045351.1 20 DOTS entries: DT.413398 DT.40309662 DT.100780203 DT.100780207 DT.95286567 DT.101962130 DT.97834292 DT.86846714 DT.97764475 DT.99946794 DT.95288013 DT.102826369 DT.65286530 DT.95286565 DT.95286569 DT.100829967 DT.92434097 DT.101980795 DT.101980796 DT.120902709 24/198 AceView cDNA sequences (see all 198): AF324219 BX418883 BX332908 AK090682 CR622246 BM553913 BQ952212 CR616428 BI818865 BQ892910 BX346410 AL557074 BI761734 CR620803 CR590197 AA303109 BX414654 BM463744 BM926898 BM904949 CR619809 AK126967 CR624042 AA303110
GeneLoc Exon Structure
5/11 Alternative Splicing Database (ASD) splice patterns (SP) for ASPSCR1 (see all 11) About this scheme
| ExUns: | 1 | ^ | 2a | · | 2b | · | 2c | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7a | · | 7b | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | · | 10c | · | 10d | · | 10e | · | 10f | ^ | 11a | · | 11b | · | 11c | · | 11d | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | - | | - | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP4: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP5: | | | - | | - | | - | | | | - | | | | | | | | - | | - | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| ExUns: | 16a | · | 16b | ^ | 17 | ^ | 18a | · | 18b | ^ | 19 |
|---|
|
| SP1: | - | | | | | | | | | | | | |
| SP2: | - | | | | | | | | - | | | | |
| SP3: | | | | | | | | | | | | | |
| SP4: | - | | | | | | | | | | | | |
| SP5: | | | | | | | | | | | | |
ECgene alternative splicing isoforms for ASPSCR1
|
Expression
for ASPSCR1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| ASPSCR1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TCCAGGGCCG
About this image
See ASPSCR1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for ASPSCR1
SOURCE GeneReport for Unigene cluster: Hs.298351
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9Tissue specificity: Ubiquitous. Highly expressed in testis, heart, skeletal muscle and pancreas
SABiosciences Custom PCR Arrays for ASPSCR1
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ASPSCR1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ASPSCR1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ASPSCR1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ASPSCR1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ASPSCR1 |
Orthologs
for ASPSCR1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for ASPSCR1 gene from 9/25 species (see all 25) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
mouse
(Mus musculus) |
Mammalia |
Aspscr11 , 5 |
alveolar soft part sarcoma chromosome region, candidate more1, 5 |
82.4(n)1
82.4(a)1 |
|
11 (84.41 cM)5
689381 NM_026877.21 NP_081153.11
1206729735 |
chicken
(Gallus gallus) |
Aves |
ASPSCR11 |
alveolar soft part sarcoma chromosome region, candidate more |
61.33(n)
57.7(a) |
|
417384 XM_415639.3 XP_415639.3 |
lizard
(Anolis carolinensis) |
Reptilia |
ASPSCR16 |
-- |
56(a) |
1 ↔ 1 |
2(118282556-118356917) |
African clawed frog
(Xenopus laevis) |
Amphibia |
Xl.166812 |
Xenopus laevis transcribed sequence with weak similarity more |
78.31(n) |
|
CD302135.1 |
zebrafish
(Danio rerio) |
Actinopterygii |
aspscr11 |
alveolar soft part sarcoma chromosome region, candidate more |
57.79(n)
56.61(a) |
|
550237 NM_001017575.1 NP_001017575.1 |
fruit fly
(Drosophila melanogaster) |
Insecta |
CG337226 |
-- |
29(a) |
1 ↔ 1 |
3R(4069781-4073577) |
worm
(Caenorhabditis elegans) |
Secernentea |
B0024.106 |
Protein B0024.10 |
18(a) |
1 ↔ 1 |
V(10315225-10317371) |
thale cress
(Arabidopsis thaliana) |
eudicotyledons |
PUX16 |
plant UBX domain-containing protein 1 |
22(a) |
1 ↔ 1 |
3(10087201-10089101) |
rice
(Oryza sativa) |
Liliopsida |
-- |
alveolar soft part sarcoma chromosome region, cand... |
21(a) |
1 ↔ 1 |
4(24068169-24072322) |
ENSEMBL Gene Tree for ASPSCR1 (if available)
TreeFam Gene Tree for ASPSCR1 (if available) |
Paralogs
for ASPSCR1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for ASPSCR1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 17 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for ASPSCR1 (79934683 - 79975282 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 4 variations for ASPSCR1
4 CNVs: 30036 5042 73078 5041 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ASPSCR1 |
|
Disorders
/ Diseases
for ASPSCR1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
ASPSCR1 for disorders About GeneDecksing
OMIM gene information: 606236
OMIM disorders: 606243
UniProtKB/Swiss-Prot: ASPC1_HUMAN, Q9BZE9
Note=A chromosomal aberration involving ASPSCR1 is found in patients with alveolar soft part sarcoma.Translocation t(X;17)(p11;q25) with TFE3 forms a ASPSCR1-TFE3 fusion protein Note=A chromosomal aberration involving ASPSCR1 has been found in two patients with of papillary renal cellcarcinoma. Translocation t(X;17)(p11.2;q25)
11  diseases for ASPSCR1: About MalaCardsalveolar soft part sarcoma renal cell carcinoma sarcoma carcinoma
advanced sleep phase syndrome necatoriasis cerebrovascular accident papillary renal cell carcinoma
cerebral palsy osteoarthritis cerebritis
3 diseases from the University of Copenhagen DISEASES database for ASPSCR1:Alveolar soft part sarcoma Osteoarthritis Cerebral palsy Human Genome Epidemiology (HuGE) Navigator: ASPSCR1 (1 document)
Export disorders for ASPSCR1 gene to outside databases
|
Publications
for ASPSCR1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for ASPSCR1 gene, integrated from 9 sources (see all 29):
(articles sorted by number of sources associating them with ASPSCR1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- The der(17)t(X;17)(p11;q25) of human alveolar soft part sarcoma fuses the TFE3 transcription factor gene to ASPL, a novel gene at 17q25. (PubMed id 11244503)1, 2, 3, 9 Ladanyi M.... Bridge J. (2001)
- Fusion of a novel gene, RCC17, to the TFE3 gene in t(X;17)(p11.2;q25.3)-bearing papillary renal cell carcinomas. (PubMed id 11358836)1, 2, 9 Heimann P....Vassart G. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Chromosome rearrangement at 17q25 and xp11.2 in alveolar soft-part sarcoma: A case report and review of the literature. (PubMed id 10506710)1, 3 Joyama S....Yoshikawa H. (1999)
- Exploring the role of p97 and its UBX-domain cofactors through identification of their interacting proteins. (PubMed id 22350894)1 Alexandru G. (2012)
- Technique for differentiating alveolar soft part sarco ma from other tumors in paraffin-embedded tissue: comparison of immunohistochemi stry for TFE3 and CD147 and of reverse transcription polymerase chain reaction f or ASPSCR1-TFE3 fusion transcript. (PubMed id 21835426)1 Tsuji K....Imamura T. (2012)
- A protein array screen for Kaposi's sarcoma-associated herpesvirus LANA interactors links LANA to TIP60, PP2A activity, and telomere s hortening. (PubMed id 22379092)1 Shamay M....Hayward S.D. (2012)
- Protein interaction profiling of the p97 adaptor UBXD1 points to a role for the complex in modulating ERGIC-53 trafficking. (PubMed id 22337587)1 Haines D.S....Deshaies R.J. (2012)
- The ubiquitin regulatory X (UBX) domain-containing pro tein TUG regulates the p97 ATPase and resides at the endoplasmic reticulum-golgi intermediate compartment. (PubMed id 22207755)1 Orme C.M. and Bogan J.S. (2012)
|
External Searches for ASPSCR1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ASPSCR1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ASPSCR1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ASPSCR1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for ASPSCR1 gene:
Search GeneIP for patents involving ASPSCR1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ASPSCR1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
| | |  | OriGene Antibodies for ASPSCR1 | | OriGene shRNA RFP for ASPSCR1 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ASPSCR1 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ASPSCR1 | | | Browse OriGene Protein Over-expression Lysates | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for ASPSCR1 | | OriGene 3'-UTR Clone for ASPSCR1 | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ASPSCR1 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | OriGene Purified Protein for ASPSCR1 | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for ASPSCR1 | | OriGene Custom Protein Services for ASPSCR1 | | | OriGene Custom Immunoassay Development | | |
| |
 |
 |
| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ASPSCR1 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ASPSCR1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ASPSCR1 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ASPSCR1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ASPSCR1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ASPSCR1 |
| |
 |  |  |  | |
| | | | Search Tocris compounds for ASPSCR1 |
| |  |  |  |  | | | | |
 |
 |
 |
 | | | ASPSCR1 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ASPSCR1 |
|  |  |  | | | | ThermoFisher Antibodies for ASPSCR1 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ASPSCR1 |
|
|
|
|
