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Aliases for ASMTL-AS1 Gene

Subcategory (RNA class) for ASMTL-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ASMTL-AS1 Gene

  • ASMTL Antisense RNA 1 2 3
  • ASMTL Antisense RNA 1 (Non-Protein Coding) 2 3
  • ASMTL Antisense RNA (Non-Protein Coding) 2
  • Chromosome X And Y Open Reading Frame 2 2
  • Non-Protein Coding RNA 105 2
  • NCRNA00105 3
  • ASMTL-AS 3
  • ASMTLAS 3
  • CXYorf2 3

External Ids for ASMTL-AS1 Gene

ORGUL Members for ASMTL-AS1 Gene

Previous HGNC Symbols for ASMTL-AS1 Gene

  • CXYorf2
  • NCRNA00105
  • ASMTLAS
  • ASMTL-AS

Previous GeneCards Identifiers for ASMTL-AS1 Gene

  • GC0XP001521

Summaries for ASMTL-AS1 Gene

Entrez Gene Summary for ASMTL-AS1 Gene

  • This gene serves as the antisense to the acetylserotonin O-methyltransferase-like gene. Multiple non-coding transcript variants have been found for this gene. [provided by RefSeq, Oct 2011]

GeneCards Summary for ASMTL-AS1 Gene

ASMTL-AS1 (ASMTL Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASMTL-AS1 Gene

Genomics for ASMTL-AS1 Gene

Genomic Location for ASMTL-AS1 Gene

Start:
1,400,531 bp from pter
End:
1,415,421 bp from pter
Size:
14,891 bases
Orientation:
Plus strand

Genomic View for ASMTL-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ASMTL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASMTL-AS1 Gene

No data available for Regulatory Elements for ASMTL-AS1 Gene

Proteins for ASMTL-AS1 Gene

Post-translational modifications for ASMTL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASMTL-AS1 Gene

Domains for ASMTL-AS1 Gene

Gene Families for ASMTL-AS1 Gene

HGNC:
  • PAR1 :Pseudoautosomal regions / PAR1
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ASMTL-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASMTL-AS1 Gene

Function for ASMTL-AS1 Gene

Phenotypes for ASMTL-AS1 Gene

GenomeRNAi human phenotypes for ASMTL-AS1:
genes like me logo Genes that share phenotypes with ASMTL-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ASMTL-AS1 Gene

Localization for ASMTL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ASMTL-AS1 Gene

Pathways for ASMTL-AS1 Gene

SuperPathways for ASMTL-AS1 Gene

No Data Available

Interacting Proteins for ASMTL-AS1 Gene

Gene Ontology (GO) - Biological Process for ASMTL-AS1 Gene

None

No data available for Pathways by source for ASMTL-AS1 Gene

Transcripts for ASMTL-AS1 Gene

Unigene Clusters for ASMTL-AS1 Gene

ASMTL antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ASMTL-AS1
    • Block miRNA regulation of ASMTL-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ASMTL-AS1

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ASMTL-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ASMTL-AS1 Gene

    No ASD Table

    Relevant External Links for ASMTL-AS1 Gene

    GeneLoc Exon Structure for
    ASMTL-AS1
    ECgene alternative splicing isoforms for
    ASMTL-AS1

    Expression for ASMTL-AS1 Gene

    mRNA expression in normal human tissues for ASMTL-AS1 Gene

    SOURCE GeneReport for Unigene cluster for ASMTL-AS1 Gene Hs.521856

    genes like me logo Genes that share expressions with ASMTL-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ASMTL-AS1 Gene

    Orthologs for ASMTL-AS1 Gene

    Evolution for ASMTL-AS1 Gene

    ENSEMBL:
    Gene Tree for ASMTL-AS1 (if available)
    TreeFam:
    Gene Tree for ASMTL-AS1 (if available)

    No data available for Orthologs for ASMTL-AS1 Gene

    Paralogs for ASMTL-AS1 Gene

    No data available for Paralogs for ASMTL-AS1 Gene

    Variants for ASMTL-AS1 Gene

    Structural Variations from Database of Genomic Variants (DGV) for ASMTL-AS1 Gene

    Variant ID Type Subtype PubMed ID
    esv29996 CNV Loss 17803354
    esv21933 CNV Gain+Loss 19812545
    dgv1357e201 CNV Deletion 23290073
    esv2666429 CNV Deletion 23128226
    esv2739698 CNV Deletion 23290073
    esv2739699 CNV Deletion 23290073
    esv2662469 CNV Deletion 23128226
    esv2739700 CNV Deletion 23290073
    esv2739701 CNV Deletion 23290073
    esv2739702 CNV Deletion 23290073
    esv2739703 CNV Deletion 23290073
    esv2667783 CNV Deletion 23128226
    esv2669866 CNV Deletion 23128226
    esv2739704 CNV Deletion 23290073
    esv2739705 CNV Deletion 23290073
    esv2678263 CNV Deletion 23128226

    Relevant External Links for ASMTL-AS1 Gene

    HapMap Linkage Disequilibrium report
    ASMTL-AS1
    Locus Specific Mutation Databases (LSDB)
    ASMTL-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for ASMTL-AS1 Gene

    Disorders for ASMTL-AS1 Gene

    No disorders were found for ASMTL-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for ASMTL-AS1 Gene

    Publications for ASMTL-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for ASMTL-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ASMTL-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for ASMTL-AS1
      • Block miRNA regulation of ASMTL-AS1 using miScript Target Protectors

      Sources for ASMTL-AS1 Gene

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