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Aliases for ASH1L-AS1 Gene

Subcategory (RNA class) for ASH1L-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ASH1L-AS1 Gene

  • ASH1L Antisense RNA 1 2 3 5
  • ASH1L Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ASH1L-AS1 Gene

ORGUL Members for ASH1L-AS1 Gene

Previous GeneCards Identifiers for ASH1L-AS1 Gene

  • GC01P155533

Summaries for ASH1L-AS1 Gene

GeneCards Summary for ASH1L-AS1 Gene

ASH1L-AS1 (ASH1L Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASH1L-AS1 Gene

Genomics for ASH1L-AS1 Gene

Regulatory Elements for ASH1L-AS1 Gene

Enhancers for ASH1L-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F154998 1.6 FANTOM5 ENCODE 27.6 -557.5 -557530 11.3 MLX CREB3L1 ZFP64 FEZF1 YBX1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 KIAA0907 THBS3 ENSG00000271267 RUSC1-AS1 ASH1L-AS1 MSTO2P KRTCAP2 ZBTB7B LOC101928120 EFNA4
GH01F155856 1.5 FANTOM5 ENCODE 27.5 +297.0 296969 5.7 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 RRNAD1 KIAA0907 ENSG00000271267 MSTO2P THBS3 ASH1L-AS1 LOC101928120 PYGO2 KRTCAP2 DCST1
GH01F155242 1.2 ENCODE 27.5 -317.7 -317739 2.9 CREB3L1 YBX1 FEZF1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 TBX21 KIAA0907 ENSG00000271267 MSTO2P RUSC1-AS1 THBS3 ASH1L PYGO2 LOC101928120 KRTCAP2 GBA
GH01F155307 1.2 ENCODE 27.5 -252.9 -252881 3.8 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 KIAA0907 LOC101928120 GBA MSTO2P ASH1L-AS1 HCN3 THBS3 ENSG00000271267 DAP3P1 MIR4258
GH01F154950 1.1 ENCODE 28.6 -607.3 -607253 8.7 PKNOX1 ZFP64 ARID4B SIN3A FOS ZNF263 NFYC REST KAT8 SMARCA4 KIAA0907 ENSG00000271267 MSTO2P THBS3 LOC101928120 PYGO2 RUSC1-AS1 ASH1L-AS1 ASH1L CHRNB2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ASH1L-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001524973 819 4001 HDGF ARNT WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143
ENSR00001750431 -1481 201 ZNF664 MTA2 SCRT2 IKZF1 NBN ETV6 TBX21

Genomic Location for ASH1L-AS1 Gene

Chromosome:
1
Start:
155,561,981 bp from pter
End:
155,563,944 bp from pter
Size:
1,964 bases
Orientation:
Plus strand

Genomic View for ASH1L-AS1 Gene

Genes around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASH1L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASH1L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASH1L-AS1 Gene

Proteins for ASH1L-AS1 Gene

Post-translational modifications for ASH1L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASH1L-AS1 Gene

Domains & Families for ASH1L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASH1L-AS1 Gene

Function for ASH1L-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASH1L-AS1 Gene

Localization for ASH1L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ASH1L-AS1 Gene

Pathways & Interactions for ASH1L-AS1 Gene

SuperPathways for ASH1L-AS1 Gene

No Data Available

Interacting Proteins for ASH1L-AS1 Gene

Gene Ontology (GO) - Biological Process for ASH1L-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ASH1L-AS1 Gene

Transcripts for ASH1L-AS1 Gene

mRNA/cDNA for ASH1L-AS1 Gene

(6) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ASH1L-AS1 Gene

ASH1L antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ASH1L-AS1 Gene

No ASD Table

Relevant External Links for ASH1L-AS1 Gene

GeneLoc Exon Structure for
ASH1L-AS1
ECgene alternative splicing isoforms for
ASH1L-AS1

Expression for ASH1L-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ASH1L-AS1 Gene

SOURCE GeneReport for Unigene cluster for ASH1L-AS1 Gene:

Hs.568693
genes like me logo Genes that share expression patterns with ASH1L-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ASH1L-AS1 Gene

Orthologs for ASH1L-AS1 Gene

Evolution for ASH1L-AS1 Gene

ENSEMBL:
Gene Tree for ASH1L-AS1 (if available)
TreeFam:
Gene Tree for ASH1L-AS1 (if available)

No data available for Orthologs for ASH1L-AS1 Gene

Paralogs for ASH1L-AS1 Gene

No data available for Paralogs for ASH1L-AS1 Gene

Variants for ASH1L-AS1 Gene

Sequence variations from dbSNP and Humsavar for ASH1L-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs112672962 -- 155,563,756(+) TCCAA(A/T)CATGC nc-transcript-variant, upstream-variant-2KB
rs112818849 -- 155,563,201(+) CGGCG(A/G)CTGCG nc-transcript-variant, upstream-variant-2KB
rs112892897 -- 155,560,433(+) AAATG(A/G)GTCTT intron-variant, upstream-variant-2KB
rs113550125 -- 155,564,341(+) ATACA(A/G)AAATT intron-variant, upstream-variant-2KB
rs114109825 -- 155,560,171(+) AAATA(C/T)AAATT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ASH1L-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv946417 CNV duplication 23825009
esv3890671 CNV gain 25118596
esv33869 CNV loss 17666407
esv2718418 CNV deletion 23290073

Relevant External Links for ASH1L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASH1L-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ASH1L-AS1 Gene

Disorders for ASH1L-AS1 Gene

Relevant External Links for ASH1L-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ASH1L-AS1

No disorders were found for ASH1L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASH1L-AS1 Gene

Publications for ASH1L-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ASH1L-AS1 Gene

Sources for ASH1L-AS1 Gene

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