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Aliases for ASH1L-AS1 Gene

Subcategory (RNA class) for ASH1L-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ASH1L-AS1 Gene

  • ASH1L Antisense RNA 1 2 3 5
  • ASH1L Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ASH1L-AS1 Gene

ORGUL Members for ASH1L-AS1 Gene

Previous GeneCards Identifiers for ASH1L-AS1 Gene

  • GC01P155533

Summaries for ASH1L-AS1 Gene

GeneCards Summary for ASH1L-AS1 Gene

ASH1L-AS1 (ASH1L Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for ASH1L-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASH1L-AS1 Gene

Genomics for ASH1L-AS1 Gene

Regulatory Elements for ASH1L-AS1 Gene

Enhancers for ASH1L-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H155242 1.5 ENCODE dbSUPER 47.3 -317.7 -317739 2.9 FEZF1 YBX1 YY1 ZNF416 ZNF143 ZNF548 SP3 ZFP41 MEF2D ZNF610 KIAA0907 GON4L ENSG00000271267 CLK2 MSTO1 MSTO2P THBS3 RUSC1-AS1 LOC101928120 SHC1
GH01H154998 1.9 FANTOM5 ENCODE dbSUPER 27.6 -557.5 -557530 11.3 MLX YBX1 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZC3H11A PPARGC1A GON4L CLK2 UBAP2L KIAA0907 ENSG00000271267 MSTO1 RUSC1-AS1 THBS3 YY1AP1 FLAD1
GH01H155222 1.4 ENCODE dbSUPER 28.7 -336.3 -336251 5.9 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 KIAA0907 MSTO1 ENSG00000271267 MSTO2P GON4L CLK2 LOC101928120 THBS3 RUSC1-AS1 GBAP1
GH01H155015 1.7 Ensembl ENCODE dbSUPER 20.3 -544.7 -544667 3.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 GON4L KIAA0907 UBAP2L ENSG00000271267 CLK2 MSTO1 LOC101928120 MSTO2P THBS3 PYGO2
GH01H155123 1.7 FANTOM5 ENCODE dbSUPER 18.9 -434.0 -433959 8.7 PKNOX1 FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 KIAA0907 GON4L CLK2 UBAP2L MSTO1 ENSG00000271267 MSTO2P LOC101928120 RUSC1-AS1 SHC1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ASH1L-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000014086 819 3601 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B

Genomic Locations for ASH1L-AS1 Gene

Genomic Locations for ASH1L-AS1 Gene
chr1:155,561,981-155,563,944
(GRCh38/hg38)
Size:
1,964 bases
Orientation:
Plus strand
chr1:155,531,772-155,533,775
(GRCh37/hg19)

Genomic View for ASH1L-AS1 Gene

Genes around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASH1L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASH1L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASH1L-AS1 Gene

Proteins for ASH1L-AS1 Gene

Post-translational modifications for ASH1L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASH1L-AS1 Gene

Domains & Families for ASH1L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASH1L-AS1 Gene

Function for ASH1L-AS1 Gene

Phenotypes From GWAS Catalog for ASH1L-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASH1L-AS1 Gene

Localization for ASH1L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ASH1L-AS1 Gene

Pathways & Interactions for ASH1L-AS1 Gene

SuperPathways for ASH1L-AS1 Gene

No Data Available

Interacting Proteins for ASH1L-AS1 Gene

Gene Ontology (GO) - Biological Process for ASH1L-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ASH1L-AS1 Gene

Drugs & Compounds for ASH1L-AS1 Gene

No Compound Related Data Available

Transcripts for ASH1L-AS1 Gene

mRNA/cDNA for ASH1L-AS1 Gene

(6) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ASH1L-AS1 Gene

ASH1L antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ASH1L-AS1 Gene

No ASD Table

Relevant External Links for ASH1L-AS1 Gene

GeneLoc Exon Structure for
ASH1L-AS1
ECgene alternative splicing isoforms for
ASH1L-AS1

Expression for ASH1L-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ASH1L-AS1 Gene

SOURCE GeneReport for Unigene cluster for ASH1L-AS1 Gene:

Hs.568693
genes like me logo Genes that share expression patterns with ASH1L-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASH1L-AS1 Gene

Orthologs for ASH1L-AS1 Gene

Evolution for ASH1L-AS1 Gene

ENSEMBL:
Gene Tree for ASH1L-AS1 (if available)
TreeFam:
Gene Tree for ASH1L-AS1 (if available)

No data available for Orthologs for ASH1L-AS1 Gene

Paralogs for ASH1L-AS1 Gene

No data available for Paralogs for ASH1L-AS1 Gene

Variants for ASH1L-AS1 Gene

Sequence variations from dbSNP and Humsavar for ASH1L-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1001362810 -- 155,562,147(+) GTTCT(A/G)CTCAC intron-variant, nc-transcript-variant
rs1001712122 -- 155,563,109(+) TCGCC(C/T)CCCTC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001870218 -- 155,560,304(+) ACCCC(A/C)AAAAA intron-variant, upstream-variant-2KB
rs1002361049 -- 155,560,598(+) GTACC(C/G)AGGCT intron-variant, upstream-variant-2KB
rs1003905494 -- 155,563,304(+) CCTAG(G/T)CAGGA nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ASH1L-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv946417 CNV duplication 23825009
esv3890671 CNV gain 25118596
esv33869 CNV loss 17666407
esv2718418 CNV deletion 23290073

Relevant External Links for ASH1L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASH1L-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ASH1L-AS1 Gene

Disorders for ASH1L-AS1 Gene

Relevant External Links for ASH1L-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ASH1L-AS1

No disorders were found for ASH1L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASH1L-AS1 Gene

Publications for ASH1L-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ASH1L-AS1 Gene

Sources for ASH1L-AS1 Gene

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