Aliases for ASB16-AS1 Gene
Subcategory (RNA class) for ASB16-AS1 Gene
non-coding RNA
Quality Score for this RNA gene is
13
Aliases for ASB16-AS1 Gene
External Ids for ASB16-AS1 Gene
- HGNC: 25442
- Entrez Gene: 339201
- Ensembl: ENSG00000267080
- UniProtKB: Q495Z4
Previous HGNC Symbols for ASB16-AS1 Gene
- C17orf65
Previous GeneCards Identifiers for ASB16-AS1 Gene
- GC17M042254
Summaries for ASB16-AS1 Gene
GeneCards Summary for ASB16-AS1 Gene
ASB16-AS1 (ASB16 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASB16-AS1 Gene
Genomics for ASB16-AS1 Gene
Regulatory Elements for ASB16-AS1 Gene
Enhancers for ASB16-AS1 Gene
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around ASB16-AS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for ASB16-AS1 Gene
- Chromosome:
- 17
- Start:
- 44,175,973 bp from pter
- End:
- 44,186,717 bp from pter
- Size:
- 10,745 bases
- Orientation:
- Minus strand
Genomic View for ASB16-AS1 Gene
Genes around ASB16-AS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q21.31 by Ensembl
- 17q21.31 by Entrez Gene
- 17q21.31 by HGNC
ASB16-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ASB16-AS1 Gene
Proteins for ASB16-AS1 Gene
-
Protein details for ASB16-AS1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q495Z4-ASAS1_HUMAN
- Recommended name:
- Putative uncharacterized protein ASB16-AS1
- Protein Accession:
- Q495Z4
- Q495Z5
- Q495Z6
Protein attributes for ASB16-AS1 Gene
- Size:
- 193 amino acids
- Molecular mass:
- 20099 Da
- Quaternary structure:
- No Data Available
Protein Expression for ASB16-AS1 Gene
Post-translational modifications for ASB16-AS1 Gene
Antibody Products
- Search GeneTex for Antibodies for ASB16-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ASB16-AS1
- Origene Custom Protein Services for ASB16-AS1
- Search GeneTex for Proteins for ASB16-AS1
Assay Products
No data available for DME Specific Peptides for ASB16-AS1 Gene
Domains & Families for ASB16-AS1 Gene
Protein Domains for ASB16-AS1 Gene
- ProtoNet:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASB16-AS1 Gene
Function for ASB16-AS1 Gene
Phenotypes for ASB16-AS1 Gene
- GenomeRNAi human phenotypes for ASB16-AS1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ASB16-AS1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for ASB16-AS1 gene
- Search ViGene Biosciences for ASB16-AS1
CRISPR Products
- Browse CRISPR knockouts for ASB16-AS1
miRNA for ASB16-AS1 Gene
- miRTarBase miRNAs that target ASB16-AS1
miRNA Products
- Search ViGene Biosciences for ASB16-AS1
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for ASB16-AS1
- Browse OriGene Inhibitory RNA Products For ASB16-AS1
- Search ViGene Biosciences for ASB16-AS1
Clone Products
-
OriGene ORF clones in human for ASB16-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- GenScript: Custom all cDNA clones Services for ASB16-AS1
- Sino Biological Human cDNA Clone for ASB16-AS1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for ASB16-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ASB16-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
ViGene Biosciences adenoviral particle packaged cDNA for ASB16-AS1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for ASB16-AS1 gene
- Search ViGene Biosciences for ASB16-AS1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ASB16-AS1 Gene
Localization for ASB16-AS1 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 2 |
| cytosol | 2 |
| mitochondrion | 1 |
| peroxisome | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ASB16-AS1 Gene
Pathways & Interactions for ASB16-AS1 Gene
No data available for Pathways by source and SIGNOR curated interactions for ASB16-AS1 Gene
Transcripts for ASB16-AS1 Gene
mRNA/cDNA for ASB16-AS1 Gene
- (1) REFSEQ mRNAs :
- (9) Additional mRNA sequences :
- (60) Selected AceView cDNA sequences:
- (5) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for ASB16-AS1 Gene
CRISPR Products
- Browse CRISPR knockouts for ASB16-AS1
miRNA Products
- Search ViGene Biosciences for ASB16-AS1
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for ASB16-AS1
- Browse OriGene Inhibitory RNA Products For ASB16-AS1
- Search ViGene Biosciences for ASB16-AS1
Clone Products
-
OriGene ORF clones in human for ASB16-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- GenScript: Custom all cDNA clones Services for ASB16-AS1
- Sino Biological Human cDNA Clone for ASB16-AS1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for ASB16-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ASB16-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for ASB16-AS1 Gene
This gene is overexpressed in Breast (60.5) and Adipocyte (8.5).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ASB16-AS1 Gene
- Elite partner
SOURCE GeneReport for Unigene cluster for ASB16-AS1 Gene:
Hs.656564Primer Products
-
OriGene qPCR primer pairs for ASB16-AS1
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASB16-AS1 Gene
Orthologs for ASB16-AS1 Gene
No data available for Orthologs for ASB16-AS1 Gene
Paralogs for ASB16-AS1 Gene
(1) SIMAP similar genes for ASB16-AS1 Gene using alignment to 1 proteins:
No data available for Paralogs for ASB16-AS1 Gene
Variants for ASB16-AS1 Gene
| SNP ID | Clin | Chr 17 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000043239 | -- | 44,180,435(+) | GAGAC(A/C)CTCTG | intron-variant | |
| rs1000075746 | -- | 44,179,609(+) | CGCAC(C/T)GCTGT | intron-variant | |
| rs1000077907 | -- | 44,182,996(+) | GGATC(A/G)CTTGA | intron-variant, nc-transcript-variant | |
| rs1000341675 | -- | 44,187,027(+) | GATTG(C/T)CAGCC | upstream-variant-2KB, utr-variant-5-prime | |
| rs1000545036 | -- | 44,186,787(+) | CCTAA(G/T)GCCCC | upstream-variant-2KB |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv529n67 | CNV | gain | 20364138 |
| nsv1134654 | CNV | deletion | 24896259 |
| nsv1146669 | OTHER | inversion | 26484159 |
| nsv833455 | CNV | loss | 17160897 |
Relevant External Links for ASB16-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ASB16-AS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ASB16-AS1 Gene
Disorders for ASB16-AS1 Gene
Relevant External Links for ASB16-AS1
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- ASB16-AS1
No disorders were found for ASB16-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASB16-AS1 Gene
Publications for ASB16-AS1 Gene
- Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 64
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
- Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3 64
- DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4 64
- Yeast two-hybrid identification of prostatic proteins interacting with human sex hormone-binding globulin. (PMID: 15862967) Pope S.N. … Lee I.R. (J. Steroid Biochem. Mol. Biol. 2005) 3 64
Products for ASB16-AS1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
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- Browse Immunoprecipitation Assays
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- Browse Peptides
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- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ASB16-AS1
- Origene Custom Protein Services for ASB16-AS1
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for ASB16-AS1
- Browse OriGene Inhibitory RNA Products For ASB16-AS1
- OriGene qPCR primer pairs for ASB16-AS1
- Browse CRISPR knockouts for ASB16-AS1
- OriGene ORF clones in human for ASB16-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ASB16-AS1
- GenScript: Custom all cDNA clones Services for ASB16-AS1
- GenScript Custom Purified and Recombinant Proteins Services for ASB16-AS1
- GenScript Custom Assay Services for ASB16-AS1
- GenScript Custom overexpressing Cell Line Services for ASB16-AS1
- Browse GenScript CRISPR for ASB16-AS1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ASB16-AS1
- Sino Biological Human cDNA Clone for ASB16-AS1
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- ViGene Biosciences adenoviral particle packaged cDNA for ASB16-AS1 gene
- ViGene Biosciences lentiviral particle packaged cDNA for ASB16-AS1 gene
- Search ViGene Biosciences for ASB16-AS1
- Cyagen custom Knockout/knockin (KOKI) mouse models for ASB16-AS1
- VectorBuilder custom plasmid, inducible vectors for ASB16-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ASB16-AS1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for ASB16-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer