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Aliases for ASAP1-IT1 Gene

Subcategory (RNA class) for ASAP1-IT1 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for ASAP1-IT1 Gene

  • ASAP1 Intronic Transcript 1 2 3
  • DDEF1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • ASAP1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • ArfGAP With SH3 Domain, Ankyrin Repeat And PH Domain 1 Intronic Transcript 1 (Non-Protein Coding) 3
  • Ankyrin Repeat And PH Domain 1 Intronic Transcript 1 (Non-Protein Coding) 2
  • ASAP1 Intronic Transcript (Non-Protein Coding) 3
  • DDEF1 Intronic Transcript 1 2
  • Non-Protein Coding RNA 50 2
  • ArfGAP With SH3 Domain 2
  • NCRNA00050 3
  • ASAP1-IT 3
  • ASAP1IT1 3
  • DDEF1IT1 3
  • ASAP1IT 3
  • HSPC054 3

External Ids for ASAP1-IT1 Gene

ORGUL Members for ASAP1-IT1 Gene

Previous Symbols for ASAP1-IT1 Gene

  • DDEF1IT1

Summaries for ASAP1-IT1 Gene

GeneCards Summary for ASAP1-IT1 Gene

ASAP1-IT1 (ASAP1 Intronic Transcript 1) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASAP1-IT1 Gene

Genomics for ASAP1-IT1 Gene

Genomic Location for ASAP1-IT1 Gene

Start:
130,295,355 bp from pter
End:
130,296,533 bp from pter
Size:
1,179 bases
Orientation:
Minus strand

Genomic View for ASAP1-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ASAP1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASAP1-IT1 Gene

No data available for Regulatory Elements for ASAP1-IT1 Gene

Proteins for ASAP1-IT1 Gene

Post-translational modifications for ASAP1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASAP1-IT1 Gene

Domains for ASAP1-IT1 Gene

Gene Families for ASAP1-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ASAP1-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASAP1-IT1 Gene

Function for ASAP1-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ASAP1-IT1 Gene

Localization for ASAP1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ASAP1-IT1 Gene

Pathways for ASAP1-IT1 Gene

SuperPathways for ASAP1-IT1 Gene

No Data Available

Interacting Proteins for ASAP1-IT1 Gene

Gene Ontology (GO) - Biological Process for ASAP1-IT1 Gene

None

No data available for Pathways by source for ASAP1-IT1 Gene

Transcripts for ASAP1-IT1 Gene

mRNA/cDNA for ASAP1-IT1 Gene

(2) Additional mRNA sequences :

Unigene Clusters for ASAP1-IT1 Gene

ASAP1 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ASAP1-IT1 Gene

No ASD Table

Relevant External Links for ASAP1-IT1 Gene

GeneLoc Exon Structure for
ASAP1-IT1
ECgene alternative splicing isoforms for
ASAP1-IT1

Expression for ASAP1-IT1 Gene

mRNA expression in normal human tissues for ASAP1-IT1 Gene

SOURCE GeneReport for Unigene cluster for ASAP1-IT1 Gene Hs.639318

genes like me logo Genes that share expressions with ASAP1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ASAP1-IT1 Gene

Orthologs for ASAP1-IT1 Gene

No data available for Orthologs and Evolution for ASAP1-IT1 Gene

Paralogs for ASAP1-IT1 Gene

No data available for Paralogs for ASAP1-IT1 Gene

Variants for ASAP1-IT1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ASAP1-IT1 Gene

Variant ID Type Subtype PubMed ID
nsv465810 CNV Gain 19166990

Relevant External Links for ASAP1-IT1 Gene

HapMap Linkage Disequilibrium report
ASAP1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for ASAP1-IT1 Gene

Disorders for ASAP1-IT1 Gene

No disorders were found for ASAP1-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for ASAP1-IT1 Gene

Publications for ASAP1-IT1 Gene

  1. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3

Products for ASAP1-IT1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ASAP1-IT1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ASAP1-IT1
    • Block miRNA regulation of ASAP1-IT1 using miScript Target Protectors

    Sources for ASAP1-IT1 Gene

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