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Aliases for ARRDC3-AS1 Gene

Subcategory (RNA class) for ARRDC3-AS1 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for ARRDC3-AS1 Gene

  • ARRDC3 Antisense RNA 1 2 3
  • ARRDC3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARRDC3-AS1 Gene

ORGUL Members for ARRDC3-AS1 Gene

Previous GeneCards Identifiers for ARRDC3-AS1 Gene

  • GC05P090676

Summaries for ARRDC3-AS1 Gene

GeneCards Summary for ARRDC3-AS1 Gene

ARRDC3-AS1 (ARRDC3 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for ARRDC3-AS1 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ARRDC3-AS1 Gene

Genomics for ARRDC3-AS1 Gene

Genomic Location for ARRDC3-AS1 Gene

Start:
91,380,347 bp from pter
End:
91,420,715 bp from pter
Size:
40,369 bases
Orientation:
Plus strand

Genomic View for ARRDC3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARRDC3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARRDC3-AS1 Gene

No data available for Regulatory Elements for ARRDC3-AS1 Gene

Proteins for ARRDC3-AS1 Gene

Post-translational modifications for ARRDC3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARRDC3-AS1 Gene

Domains for ARRDC3-AS1 Gene

Gene Families for ARRDC3-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ARRDC3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARRDC3-AS1 Gene

Function for ARRDC3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ARRDC3-AS1 Gene

Localization for ARRDC3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARRDC3-AS1 Gene

Pathways for ARRDC3-AS1 Gene

SuperPathways for ARRDC3-AS1 Gene

No Data Available

Interacting Proteins for ARRDC3-AS1 Gene

Gene Ontology (GO) - Biological Process for ARRDC3-AS1 Gene

None

No data available for Pathways by source for ARRDC3-AS1 Gene

Transcripts for ARRDC3-AS1 Gene

mRNA/cDNA for ARRDC3-AS1 Gene

(2) Additional mRNA sequences :

Unigene Clusters for ARRDC3-AS1 Gene

ARRDC3 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ARRDC3-AS1
    • Block miRNA regulation of ARRDC3-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ARRDC3-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ARRDC3-AS1 Gene

    No ASD Table

    Relevant External Links for ARRDC3-AS1 Gene

    GeneLoc Exon Structure for
    ARRDC3-AS1
    ECgene alternative splicing isoforms for
    ARRDC3-AS1

    Expression for ARRDC3-AS1 Gene

    SOURCE GeneReport for Unigene cluster for ARRDC3-AS1 Gene Hs.116364

    No Expression Related Data Available

    In Situ Assay Products

    No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ARRDC3-AS1 Gene

    Orthologs for ARRDC3-AS1 Gene

    No data available for Orthologs and Evolution for ARRDC3-AS1 Gene

    Paralogs for ARRDC3-AS1 Gene

    No data available for Paralogs for ARRDC3-AS1 Gene

    Variants for ARRDC3-AS1 Gene

    Sequence variations from dbSNP and Humsavar for ARRDC3-AS1 Gene

    SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
    rs746637 -- 91,385,820(+) TTGGC(C/G)AGGCT intron-variant
    rs889213 -- 91,386,334(+) TATCT(C/T)CTTTG intron-variant
    rs889214 -- 91,386,655(+) ATTTT(A/T)AAAAA intron-variant
    rs958123 -- 91,407,425(-) GTGAA(A/G)AGAAC intron-variant
    rs1133120 -- 91,418,993(+) CTGAG(G/T)TTTTG nc-transcript-variant

    Relevant External Links for ARRDC3-AS1 Gene

    HapMap Linkage Disequilibrium report
    ARRDC3-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ARRDC3-AS1 Gene

    Disorders for ARRDC3-AS1 Gene

    No disorders were found for ARRDC3-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for ARRDC3-AS1 Gene

    Publications for ARRDC3-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for ARRDC3-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ARRDC3-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for ARRDC3-AS1
      • Block miRNA regulation of ARRDC3-AS1 using miScript Target Protectors

      Sources for ARRDC3-AS1 Gene

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