Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ARPP21-AS1 Gene

Subcategory (RNA class) for ARPP21-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARPP21-AS1 Gene

  • ARPP21 Antisense RNA 1 2 3 5
  • ARPP21 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARPP21-AS1 Gene

Previous GeneCards Identifiers for ARPP21-AS1 Gene

  • GC00U933091

Summaries for ARPP21-AS1 Gene

GeneCards Summary for ARPP21-AS1 Gene

ARPP21-AS1 (ARPP21 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARPP21-AS1 Gene

Genomics for ARPP21-AS1 Gene

Regulatory Elements for ARPP21-AS1 Gene

Enhancers for ARPP21-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G035676 0.9 Ensembl ENCODE dbSUPER 11.5 -26.9 -26898 3.8 POLR2A SMARCA4 ARPP21 ARPP21-AS1 MIR128-2 GC03P035745
GH03G035684 0.4 dbSUPER 11.5 -33.2 -33179 1.4 FOXA2 FOXA1 ARPP21-AS1 MIR128-2 ARPP21 GC03P035745
GH03G035685 0.2 dbSUPER 11.5 -34.4 -34360 0.9 ARPP21-AS1 MIR128-2 GC03P035745
GH03G035662 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.0 -13022 5.2 JUND POLR2A SMARCA4 FOXP2 HNF4A FOS ARPP21 ARPP21-AS1 GC03P035745
GH03G035638 1.2 Ensembl ENCODE dbSUPER 0.4 +11.8 11812 3.1 ZNF263 CTCF MXI1 RNF2 SUZ12 SIN3A CBX2 CBX8 POLR2A ZBTB48 ARPP21 ARPP21-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARPP21-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ARPP21-AS1 Gene

Chromosome:
3
Start:
35,650,197 bp from pter
End:
35,651,961 bp from pter
Size:
1,765 bases
Orientation:
Minus strand

Genomic View for ARPP21-AS1 Gene

Genes around ARPP21-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARPP21-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARPP21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARPP21-AS1 Gene

Proteins for ARPP21-AS1 Gene

Post-translational modifications for ARPP21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARPP21-AS1 Gene

Domains & Families for ARPP21-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARPP21-AS1 Gene

Function for ARPP21-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARPP21-AS1 Gene

Localization for ARPP21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARPP21-AS1 Gene

Pathways & Interactions for ARPP21-AS1 Gene

SuperPathways for ARPP21-AS1 Gene

No Data Available

Interacting Proteins for ARPP21-AS1 Gene

Gene Ontology (GO) - Biological Process for ARPP21-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARPP21-AS1 Gene

Transcripts for ARPP21-AS1 Gene

mRNA/cDNA for ARPP21-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARPP21-AS1 Gene

No ASD Table

Relevant External Links for ARPP21-AS1 Gene

GeneLoc Exon Structure for
ARPP21-AS1
ECgene alternative splicing isoforms for
ARPP21-AS1

Expression for ARPP21-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARPP21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARPP21-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x15.2), Brain - Cerebellar Hemisphere (x12.8), and Muscle - Skeletal (x9.2).
genes like me logo Genes that share expression patterns with ARPP21-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARPP21-AS1 Gene

Orthologs for ARPP21-AS1 Gene

Evolution for ARPP21-AS1 Gene

ENSEMBL:
Gene Tree for ARPP21-AS1 (if available)
TreeFam:
Gene Tree for ARPP21-AS1 (if available)

No data available for Orthologs for ARPP21-AS1 Gene

Paralogs for ARPP21-AS1 Gene

No data available for Paralogs for ARPP21-AS1 Gene

Variants for ARPP21-AS1 Gene

Relevant External Links for ARPP21-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARPP21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARPP21-AS1 Gene

Disorders for ARPP21-AS1 Gene

No disorders were found for ARPP21-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARPP21-AS1 Gene

Publications for ARPP21-AS1 Gene

No publications were found for ARPP21-AS1 Gene.

Products for ARPP21-AS1 Gene

Sources for ARPP21-AS1 Gene

Content
Loading form....