Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ARMCX5-GPRASP2 Gene

Aliases for ARMCX5-GPRASP2 Gene

  • ARMCX5-GPRASP2 Readthrough 2 3 5

External Ids for ARMCX5-GPRASP2 Gene

Previous GeneCards Identifiers for ARMCX5-GPRASP2 Gene

  • GC0XU901682
  • GC0XP101858

Summaries for ARMCX5-GPRASP2 Gene

Entrez Gene Summary for ARMCX5-GPRASP2 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring armadillo repeat containing, X-linked 5 and G protein-coupled receptor associated sorting protein 2 genes on chromosome X. The read-through transcript produces a protein identical to protein encoded by the downstream locus, G protein-coupled receptor associated sorting protein 2. [provided by RefSeq, Dec 2010]

GeneCards Summary for ARMCX5-GPRASP2 Gene

ARMCX5-GPRASP2 (ARMCX5-GPRASP2 Readthrough) is a Protein Coding gene. GO annotations related to this gene include beta-amyloid binding. An important paralog of this gene is GPRASP2.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARMCX5-GPRASP2 Gene

Genomics for ARMCX5-GPRASP2 Gene

Regulatory Elements for ARMCX5-GPRASP2 Gene

Enhancers for ARMCX5-GPRASP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF103151 0.6 Ensembl ENCODE 12.3 +553.0 552971 1.4 ARNT FEZF1 GLI4 ZNF2 ZNF121 GLIS2 FOS ZNF518A RFX3 SMARCA4 BEX4 GPRASP1 TCEAL3 ZCCHC18 BEX3 TCEAL7 BHLHB9 ARMCX5-GPRASP2 RAB9B TCEAL5
GH0XF103063 0.5 ENCODE 11.7 +464.5 464469 1.6 TFAP4 ZIC2 HIC1 GLIS2 POLR2A PATZ1 PRDM10 ZBTB20 ZBTB10 MAZ BEX4 BEX1 GPRASP1 ARMCX5-GPRASP2 BHLHB9 TCEAL2 TCEAL5 GC0XP103022
GH0XF102598 0.4 ENCODE 0.8 +0.4 412 2.3 PKNOX1 ATF1 CREB3L1 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF143 SP3 GPRASP1 GPRASP2 ARMCX5-GPRASP2 ENSG00000227211
GH0XF102604 0.2 ENCODE 0.4 +5.4 5428 1.4 EBF1 ARMCX5-GPRASP2 ENSG00000227211
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ARMCX5-GPRASP2 on UCSC Golden Path with GeneCards custom track

Promoters for ARMCX5-GPRASP2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000480584 553 2599 PKNOX1 ATF1 CREB3L1 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF143 SP3

Genomic Location for ARMCX5-GPRASP2 Gene

Chromosome:
X
Start:
102,599,348 bp from pter
End:
102,717,733 bp from pter
Size:
118,386 bases
Orientation:
Plus strand

Genomic View for ARMCX5-GPRASP2 Gene

Genes around ARMCX5-GPRASP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARMCX5-GPRASP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARMCX5-GPRASP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMCX5-GPRASP2 Gene

Proteins for ARMCX5-GPRASP2 Gene

Post-translational modifications for ARMCX5-GPRASP2 Gene

No Post-translational modifications

Other Protein References for ARMCX5-GPRASP2 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for ARMCX5-GPRASP2 Gene

Domains & Families for ARMCX5-GPRASP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARMCX5-GPRASP2 Gene

Function for ARMCX5-GPRASP2 Gene

Gene Ontology (GO) - Molecular Function for ARMCX5-GPRASP2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001540 beta-amyloid binding IEA --
GO:0005515 protein binding IPI 21988832
genes like me logo Genes that share ontologies with ARMCX5-GPRASP2: view

Animal Model Products

CRISPR Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARMCX5-GPRASP2 Gene

Localization for ARMCX5-GPRASP2 Gene

Gene Ontology (GO) - Cellular Components for ARMCX5-GPRASP2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA --
genes like me logo Genes that share ontologies with ARMCX5-GPRASP2: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ARMCX5-GPRASP2 Gene

Pathways & Interactions for ARMCX5-GPRASP2 Gene

SuperPathways for ARMCX5-GPRASP2 Gene

No Data Available

Interacting Proteins for ARMCX5-GPRASP2 Gene

Gene Ontology (GO) - Biological Process for ARMCX5-GPRASP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARMCX5-GPRASP2 Gene

Transcripts for ARMCX5-GPRASP2 Gene

mRNA/cDNA for ARMCX5-GPRASP2 Gene

(1) REFSEQ mRNAs :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARMCX5-GPRASP2 Gene

No ASD Table

Relevant External Links for ARMCX5-GPRASP2 Gene

GeneLoc Exon Structure for
ARMCX5-GPRASP2
ECgene alternative splicing isoforms for
ARMCX5-GPRASP2

Expression for ARMCX5-GPRASP2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ARMCX5-GPRASP2 Gene

Orthologs for ARMCX5-GPRASP2 Gene

Evolution for ARMCX5-GPRASP2 Gene

ENSEMBL:
Gene Tree for ARMCX5-GPRASP2 (if available)
TreeFam:
Gene Tree for ARMCX5-GPRASP2 (if available)

No data available for Orthologs for ARMCX5-GPRASP2 Gene

Paralogs for ARMCX5-GPRASP2 Gene

Paralogs for ARMCX5-GPRASP2 Gene

genes like me logo Genes that share paralogs with ARMCX5-GPRASP2: view

Variants for ARMCX5-GPRASP2 Gene

Sequence variations from dbSNP and Humsavar for ARMCX5-GPRASP2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs10482009 -- 102,637,727(+) tttga(A/G)tgctg intron-variant
rs1075121 -- 102,682,926(+) aagcc(G/T)tgtgt intron-variant
rs10855498 -- 102,633,591(+) tgtgt(A/G)tatat intron-variant
rs111273374 -- 102,715,322(+) GCCGT(C/T)GCTTG reference, synonymous-codon
rs111279294 -- 102,643,663(+) TTTTA(A/G)TCCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARMCX5-GPRASP2 Gene

Variant ID Type Subtype PubMed ID
nsv526716 CNV gain 19592680
nsv7017 CNV insertion 18451855

Relevant External Links for ARMCX5-GPRASP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARMCX5-GPRASP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARMCX5-GPRASP2 Gene

Disorders for ARMCX5-GPRASP2 Gene

Relevant External Links for ARMCX5-GPRASP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARMCX5-GPRASP2

No disorders were found for ARMCX5-GPRASP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARMCX5-GPRASP2 Gene

Publications for ARMCX5-GPRASP2 Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  2. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64
  3. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 64
  4. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 64
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for ARMCX5-GPRASP2 Gene

Sources for ARMCX5-GPRASP2 Gene

Content
Loading form....