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Aliases for ARMC7 Gene

Aliases for ARMC7 Gene

  • Armadillo Repeat Containing 7 2 3

External Ids for ARMC7 Gene

Previous GeneCards Identifiers for ARMC7 Gene

  • GC17P070617
  • GC17P073106
  • GC17P068515

Summaries for ARMC7 Gene

GeneCards Summary for ARMC7 Gene

ARMC7 (Armadillo Repeat Containing 7) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARMC7 Gene

Genomics for ARMC7 Gene

Regulatory Elements for ARMC7 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ARMC7 Gene

Start:
75,109,952 bp from pter
End:
75,130,265 bp from pter
Size:
20,314 bases
Orientation:
Plus strand

Genomic View for ARMC7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARMC7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMC7 Gene

Proteins for ARMC7 Gene

  • Protein details for ARMC7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H6L4-ARMC7_HUMAN
    Recommended name:
    Armadillo repeat-containing protein 7
    Protein Accession:
    Q9H6L4
    Secondary Accessions:
    • B4DVA4

    Protein attributes for ARMC7 Gene

    Size:
    198 amino acids
    Molecular mass:
    21924 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ARMC7 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ARMC7 Gene

Proteomics data for ARMC7 Gene at MOPED

Post-translational modifications for ARMC7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ARMC7 Gene

No data available for DME Specific Peptides for ARMC7 Gene

Domains for ARMC7 Gene

Gene Families for ARMC7 Gene

HGNC:
  • ARMC :Armadillo repeat containing

Protein Domains for ARMC7 Gene

Suggested Antigen Peptide Sequences for ARMC7 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9H6L4

UniProtKB/Swiss-Prot:

ARMC7_HUMAN :
  • Q9H6L4
Similarity:
  • Contains 2 ARM repeats.
genes like me logo Genes that share domains with ARMC7: view

Function for ARMC7 Gene

Gene Ontology (GO) - Molecular Function for ARMC7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
GO:0005515 protein binding IPI 16189514
genes like me logo Genes that share ontologies with ARMC7: view

Animal Model Products

CRISPR Products

miRNA for ARMC7 Gene

miRTarBase miRNAs that target ARMC7

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARMC7

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ARMC7 Gene

Localization for ARMC7 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ARMC7 Gene COMPARTMENTS Subcellular localization image for ARMC7 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for ARMC7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
GO:0005737 cytoplasm IDA --
genes like me logo Genes that share ontologies with ARMC7: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ARMC7 Gene

Pathways for ARMC7 Gene

SuperPathways for ARMC7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARMC7 Gene

None

No data available for Pathways by source for ARMC7 Gene

Transcripts for ARMC7 Gene

Unigene Clusters for ARMC7 Gene

Armadillo repeat containing 7:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARMC7

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARMC7 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c · 3d · 3e ^ 4 ^ 5a · 5b
SP1: - - - - - -
SP2: - - - - -
SP3:
SP4: - - -
SP5: -

Relevant External Links for ARMC7 Gene

GeneLoc Exon Structure for
ARMC7
ECgene alternative splicing isoforms for
ARMC7

Expression for ARMC7 Gene

mRNA expression in normal human tissues for ARMC7 Gene

mRNA differential expression in normal tissues according to GTEx for ARMC7 Gene

This gene is overexpressed in Kidney - Cortex (5.3) and Whole Blood (4.8).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for ARMC7 Gene

SOURCE GeneReport for Unigene cluster for ARMC7 Gene Hs.413047

genes like me logo Genes that share expressions with ARMC7: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ARMC7 Gene

Orthologs for ARMC7 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ARMC7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ARMC7 35
  • 98.99 (n)
  • 98.99 (a)
ARMC7 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ARMC7 35
  • 86.97 (n)
  • 86.29 (a)
ARMC7 36
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ARMC7 36
  • 87 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Armc7 35
  • 84.09 (n)
  • 84.26 (a)
Armc7 16
Armc7 36
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ARMC7 36
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 52 (a)
OneToMany
-- 36
  • 75 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Armc7 35
  • 84.26 (n)
  • 84.77 (a)
chicken
(Gallus gallus)
Aves ARMC7 35
  • 70.56 (n)
  • 70 (a)
ARMC7 36
  • 69 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ARMC7 36
  • 66 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.6511 35
tropical clawed frog
(Silurana tropicalis)
Amphibia armc7 35
  • 65.07 (n)
  • 62.4 (a)
zebrafish
(Danio rerio)
Actinopterygii armc7 35
  • 63.45 (n)
  • 63.07 (a)
armc7 36
  • 59 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG14881 36
  • 18 (a)
OneToOne
thale cress
(Arabidopsis thaliana)
eudicotyledons AT5G37290 35
  • 51.85 (n)
  • 47.71 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10883 36
  • 43 (a)
OneToOne
Species with no ortholog for ARMC7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ARMC7 Gene

ENSEMBL:
Gene Tree for ARMC7 (if available)
TreeFam:
Gene Tree for ARMC7 (if available)

Paralogs for ARMC7 Gene

No data available for Paralogs for ARMC7 Gene

Variants for ARMC7 Gene

Sequence variations from dbSNP and Humsavar for ARMC7 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs750843 -- 75,124,605(+) GACCA(C/T)AGCAC intron-variant
rs750844 -- 75,124,833(+) CACTT(A/G)TTTCT intron-variant
rs899316 -- 75,125,314(-) CTAGG(C/T)GCTCT intron-variant
rs899317 -- 75,124,959(-) GTGGC(A/G)TTCTG intron-variant
rs1056665 -- 75,114,514(+) CACTT(C/T)TCAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARMC7 Gene

Variant ID Type Subtype PubMed ID
nsv908744 CNV Loss 21882294
nsv908756 CNV Loss 21882294
nsv470602 CNV Loss 18288195
nsv908757 CNV Loss 21882294
esv2663217 CNV Deletion 23128226
nsv908758 CNV Loss 21882294

Relevant External Links for ARMC7 Gene

HapMap Linkage Disequilibrium report
ARMC7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ARMC7 Gene

Disorders for ARMC7 Gene

No disorders were found for ARMC7 Gene.

No data available for UniProtKB/Swiss-Prot for ARMC7 Gene

Publications for ARMC7 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3

Products for ARMC7 Gene

Sources for ARMC7 Gene

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