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Aliases for ARMC6 Gene

Aliases for ARMC6 Gene

  • Armadillo Repeat Containing 6 2 3
  • Armadillo Repeat-Containing Protein 6 3
  • R30923_1 3

External Ids for ARMC6 Gene

Previous GeneCards Identifiers for ARMC6 Gene

  • GC19P019144
  • GC19P018708

Summaries for ARMC6 Gene

Entrez Gene Summary for ARMC6 Gene

  • The function of this gene's protein product has not been determined. A related protein in mouse suggests that this protein has a conserved function. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2010]

GeneCards Summary for ARMC6 Gene

ARMC6 (Armadillo Repeat Containing 6) is a Protein Coding gene.

Gene Wiki entry for ARMC6 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARMC6 Gene

Genomics for ARMC6 Gene

Regulatory Elements for ARMC6 Gene

Genomic Location for ARMC6 Gene

19,033,575 bp from pter
19,060,311 bp from pter
26,737 bases
Plus strand

Genomic View for ARMC6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARMC6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMC6 Gene

Proteins for ARMC6 Gene

  • Protein details for ARMC6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Armadillo repeat-containing protein 6
    Protein Accession:
    Secondary Accessions:
    • B4DI98
    • O94999
    • Q9BTH5

    Protein attributes for ARMC6 Gene

    501 amino acids
    Molecular mass:
    54142 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAD03162.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=AAH67125.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for ARMC6 Gene


neXtProt entry for ARMC6 Gene

Proteomics data for ARMC6 Gene at MOPED

Post-translational modifications for ARMC6 Gene

  • Ubiquitination at Lys125, Lys134, Lys208, Lys274, Lys284, Lys345, Lys361, Lys422, Lys432, and Lys450
  • Modification sites at PhosphoSitePlus

Antibody Products

No data available for DME Specific Peptides for ARMC6 Gene

Domains for ARMC6 Gene

Gene Families for ARMC6 Gene

Protein Domains for ARMC6 Gene

Suggested Antigen Peptide Sequences for ARMC6 Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the ARMC6 family.
  • Contains 4 ARM repeats.
  • Belongs to the ARMC6 family.
  • Contains 4 ARM repeats.
genes like me logo Genes that share domains with ARMC6: view

Function for ARMC6 Gene

Gene Ontology (GO) - Molecular Function for ARMC6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ARMC6: view

Animal Model Products

miRNA for ARMC6 Gene

miRTarBase miRNAs that target ARMC6

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARMC6

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ARMC6 Gene

Localization for ARMC6 Gene

Subcellular locations from

Jensen Localization Image for ARMC6 Gene COMPARTMENTS Subcellular localization image for ARMC6 gene
Compartment Confidence
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ARMC6 Gene

Pathways for ARMC6 Gene

SuperPathways for ARMC6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARMC6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002244 hematopoietic progenitor cell differentiation IEA --
genes like me logo Genes that share ontologies with ARMC6: view

No data available for Pathways by source for ARMC6 Gene

Transcripts for ARMC6 Gene

Unigene Clusters for ARMC6 Gene

Armadillo repeat containing 6:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARMC6

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARMC6 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f · 1g ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c · 7d · 7e · 7f ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12a ·
SP1: - - -
SP2: - -
SP3: -
SP4: - - - -
SP5: - - - - -
SP6: - - - -
SP7: - - - -
SP8: -
SP9: - - - - - -

ExUns: 12b

Relevant External Links for ARMC6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ARMC6 Gene

mRNA expression in normal human tissues for ARMC6 Gene

Protein differential expression in normal tissues for ARMC6 Gene

This gene is overexpressed in Bone (56.1).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for ARMC6 Gene

SOURCE GeneReport for Unigene cluster for ARMC6 Gene Hs.77876

genes like me logo Genes that share expressions with ARMC6: view

Expression partners for ARMC6 Gene

* - Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ARMC6 Gene

Orthologs for ARMC6 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ARMC6 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia ARMC6 35
  • 85.11 (n)
  • 84.83 (a)
ARMC6 36
  • 84 (a)
(Canis familiaris)
Mammalia ARMC6 35
  • 84.01 (n)
  • 85.29 (a)
ARMC6 36
  • 84 (a)
(Mus musculus)
Mammalia Armc6 35
  • 81.3 (n)
  • 83.94 (a)
Armc6 16
Armc6 36
  • 83 (a)
(Pan troglodytes)
Mammalia ARMC6 35
  • 98.8 (n)
  • 98.8 (a)
ARMC6 36
  • 99 (a)
(Rattus norvegicus)
Mammalia Armc6 35
  • 80.57 (n)
  • 79.92 (a)
(Monodelphis domestica)
Mammalia ARMC6 36
  • 71 (a)
(Ornithorhynchus anatinus)
Mammalia ARMC6 36
  • 65 (a)
(Gallus gallus)
Aves ARMC6 35
  • 67.37 (n)
  • 65.4 (a)
ARMC6 36
  • 65 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia armc6 35
  • 62.72 (n)
  • 66.67 (a)
Str.9830 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.20487 35
(Danio rerio)
Actinopterygii LOC555425 35
  • 64.52 (n)
  • 63.44 (a)
ARMC6 36
  • 57 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP006617 35
  • 47.74 (n)
  • 33.63 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG5721 35
  • 47.11 (n)
  • 34.89 (a)
CG5721 36
  • 32 (a)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT4G33945 35
  • 39.53 (n)
  • 29.02 (a)
(Oryza sativa)
Liliopsida Os02g0761200 35
  • 40.67 (n)
  • 29.25 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3480 36
  • 32 (a)
Species with no ortholog for ARMC6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ARMC6 Gene

Gene Tree for ARMC6 (if available)
Gene Tree for ARMC6 (if available)

Paralogs for ARMC6 Gene

genes like me logo Genes that share paralogs with ARMC6: view

No data available for Paralogs for ARMC6 Gene

Variants for ARMC6 Gene

Sequence variations from dbSNP and Humsavar for ARMC6 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs739828 -- 19,043,270(+) GTTAT(G/T)AGGGG intron-variant
rs929215 -- 19,057,189(+) AGATC(C/T)TGGAG intron-variant
rs1004079 -- 19,044,736(+) TGCAA(A/G)GCTGG intron-variant
rs1050337 -- 19,058,085(+) TCTCA(A/G)ATGCT utr-variant-3-prime
rs1050339 -- 19,058,121(+) TGTCT(C/T)TGGGT utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for ARMC6 Gene

Variant ID Type Subtype PubMed ID
nsv833778 CNV Loss 17160897
nsv833779 CNV Loss 17160897

Relevant External Links for ARMC6 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ARMC6 Gene

Disorders for ARMC6 Gene

No disorders were found for ARMC6 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ARMC6 Gene

Publications for ARMC6 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Large-scale mapping of human protein-protein interactions by mass spectrometry. (PMID: 17353931) Ewing R.M. … Figeys D. (Mol. Syst. Biol. 2007) 3
  5. Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. (PMID: 18781797) Meierhofer D. … Kaiser P. (J. Proteome Res. 2008) 3

Products for ARMC6 Gene

Sources for ARMC6 Gene

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