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Aliases for ARMC4P1 Gene

Aliases for ARMC4P1 Gene

  • Armadillo Repeat Containing 4 Pseudogene 1 2 3

External Ids for ARMC4P1 Gene

Previous GeneCards Identifiers for ARMC4P1 Gene

  • GC10P027547

Summaries for ARMC4P1 Gene

GeneCards Summary for ARMC4P1 Gene

ARMC4P1 (Armadillo Repeat Containing 4 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARMC4P1 Gene

Genomics for ARMC4P1 Gene

Genomic Location for ARMC4P1 Gene

Start:
27,258,762 bp from pter
End:
27,291,418 bp from pter
Size:
32,657 bases
Orientation:
Plus strand

Genomic View for ARMC4P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARMC4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMC4P1 Gene

No data available for Regulatory Elements for ARMC4P1 Gene

Proteins for ARMC4P1 Gene

Post-translational modifications for ARMC4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARMC4P1 Gene

Domains for ARMC4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARMC4P1 Gene

Function for ARMC4P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ARMC4P1 Gene

Localization for ARMC4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARMC4P1 Gene

Pathways for ARMC4P1 Gene

SuperPathways for ARMC4P1 Gene

No Data Available

Interacting Proteins for ARMC4P1 Gene

Gene Ontology (GO) - Biological Process for ARMC4P1 Gene

None

No data available for Pathways by source for ARMC4P1 Gene

Transcripts for ARMC4P1 Gene

mRNA/cDNA for ARMC4P1 Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARMC4P1 Gene

No ASD Table

Relevant External Links for ARMC4P1 Gene

GeneLoc Exon Structure for
ARMC4P1
ECgene alternative splicing isoforms for
ARMC4P1

Expression for ARMC4P1 Gene

mRNA expression in normal human tissues for ARMC4P1 Gene

mRNA differential expression in normal tissues according to GTEx for ARMC4P1 Gene

This gene is overexpressed in Testis (12.2).
genes like me logo Genes that share expressions with ARMC4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ARMC4P1 Gene

Orthologs for ARMC4P1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ARMC4P1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ARMC4 35
  • 98.74 (n)
  • 97.3 (a)
dog
(Canis familiaris)
Mammalia LOC102151256 35
  • 80.09 (n)
  • 65.77 (a)
Species with no ortholog for ARMC4P1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ARMC4P1 Gene

ENSEMBL:
Gene Tree for ARMC4P1 (if available)
TreeFam:
Gene Tree for ARMC4P1 (if available)

Paralogs for ARMC4P1 Gene

No data available for Paralogs for ARMC4P1 Gene

Variants for ARMC4P1 Gene

Sequence variations from dbSNP and Humsavar for ARMC4P1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs487219 -- 27,265,416(-) GCAGA(A/C)CACCT upstream-variant-2KB
rs493598 -- 27,272,047(-) cccat(A/C)tctac intron-variant
rs510242 -- 27,265,244(-) ATATA(G/T)AGAGA upstream-variant-2KB
rs517486 -- 27,271,705(-) agcac(A/T)ttggg intron-variant
rs525441 -- 27,278,785(-) caaaa(C/G)cctct intron-variant

Relevant External Links for ARMC4P1 Gene

HapMap Linkage Disequilibrium report
ARMC4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ARMC4P1 Gene

Disorders for ARMC4P1 Gene

No disorders were found for ARMC4P1 Gene.

No data available for UniProtKB/Swiss-Prot for ARMC4P1 Gene

Publications for ARMC4P1 Gene

No publications were found for ARMC4P1 Gene.

Products for ARMC4P1 Gene

Sources for ARMC4P1 Gene

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