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Aliases for ARMC1 Gene

Aliases for ARMC1 Gene

  • Armadillo Repeat Containing 1 2 3 5
  • Arcp 3 4
  • Armadillo Repeat-Containing Protein 1 3

External Ids for ARMC1 Gene

Previous GeneCards Identifiers for ARMC1 Gene

  • GC08M066677
  • GC08M066515
  • GC08M062004

Summaries for ARMC1 Gene

GeneCards Summary for ARMC1 Gene

ARMC1 (Armadillo Repeat Containing 1) is a Protein Coding gene. GO annotations related to this gene include binding.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARMC1 Gene

Genomics for ARMC1 Gene

Regulatory Elements for ARMC1 Gene

Enhancers for ARMC1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G065836 1.7 FANTOM5 ENCODE dbSUPER 10 -205.9 -205893 7.0 HDGF PKNOX1 MLX CREB3L1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 MTFR1 DNAJC5B C8orf44 ARMC1 LINC01299 PDE7A GC08M065824
GH08G065928 1.4 Ensembl ENCODE dbSUPER 10 -297.2 -297180 5.2 FOXA2 RAD21 RFX5 RCOR1 MIXL1 ZBTB11 ZNF426 CEBPB PPARG ZNF623 MTFR1 C8orf44 ARMC1 LINC01299 GC08P065965 GC08M065874
GH08G065632 1.1 ENCODE 11.3 -0.2 -166 2.8 PKNOX1 FOXA2 CREB3L1 ARNT ARID4B SIN3A DMAP1 YY1 CBX5 ZNF207 MTFR1 ENSG00000272010 ARMC1
GH08G066151 1.1 dbSUPER 10 -518.2 -518220 1.1 HNRNPUL1 HDGF PKNOX1 CREB3L1 ARNT ZFP64 ARID4B SIN3A DMAP1 FEZF1 C8orf44 CSPP1 CRH TRIM55 ARMC1 LINC00967 GC08P066170 GC08P066135 GC08P066139 PIR59286
GH08G065643 1.1 ENCODE 5.9 -10.3 -10302 2.7 HDGF PKNOX1 AGO1 ARID4B SIN3A ZBTB7B YY1 SLC30A9 ZNF766 ZNF143 MTFR1 ENSG00000272010 ARMC1 ENSG00000272155
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARMC1 on UCSC Golden Path with GeneCards custom track

Promoters for ARMC1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for ARMC1 Gene

65,602,456 bp from pter
65,634,217 bp from pter
31,762 bases
Minus strand

Genomic View for ARMC1 Gene

Genes around ARMC1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARMC1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARMC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMC1 Gene

Proteins for ARMC1 Gene

  • Protein details for ARMC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Armadillo repeat-containing protein 1
    Protein Accession:
    Secondary Accessions:
    • B4E2W7
    • Q9H018
    • Q9H820

    Protein attributes for ARMC1 Gene

    282 amino acids
    Molecular mass:
    31281 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ARMC1 Gene


neXtProt entry for ARMC1 Gene

Post-translational modifications for ARMC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ARMC1 Gene

Domains & Families for ARMC1 Gene

Gene Families for ARMC1 Gene

Protein Domains for ARMC1 Gene

Suggested Antigen Peptide Sequences for ARMC1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ARMC1: view

No data available for UniProtKB/Swiss-Prot for ARMC1 Gene

Function for ARMC1 Gene

Gene Ontology (GO) - Molecular Function for ARMC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ARMC1: view
genes like me logo Genes that share phenotypes with ARMC1: view

Animal Model Products

CRISPR Products

miRNA for ARMC1 Gene

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ARMC1 Gene

Localization for ARMC1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ARMC1 gene
Compartment Confidence
nucleus 4
mitochondrion 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ARMC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
GO:0005737 cytoplasm IBA --
GO:0005739 mitochondrion IEA --
genes like me logo Genes that share ontologies with ARMC1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ARMC1 Gene

Pathways & Interactions for ARMC1 Gene

SuperPathways for ARMC1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARMC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0030001 metal ion transport IEA --
genes like me logo Genes that share ontologies with ARMC1: view

No data available for Pathways by source and SIGNOR curated interactions for ARMC1 Gene

Drugs & Compounds for ARMC1 Gene

No Compound Related Data Available

Transcripts for ARMC1 Gene

Unigene Clusters for ARMC1 Gene

Armadillo repeat containing 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARMC1 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b · 5c ^ 6a · 6b ^ 7 ^ 8
SP1: - -
SP2: -
SP3: - - -
SP4: -
SP5: - - -

Relevant External Links for ARMC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ARMC1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARMC1 Gene

Protein differential expression in normal tissues from HIPED for ARMC1 Gene

This gene is overexpressed in Skin (7.2) and Bone marrow stromal cell (6.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ARMC1 Gene

Protein tissue co-expression partners for ARMC1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ARMC1 Gene:


SOURCE GeneReport for Unigene cluster for ARMC1 Gene:


Evidence on tissue expression from TISSUES for ARMC1 Gene

  • Lymph node(4.2)
  • Stomach(4.2)
  • Nervous system(3.8)
genes like me logo Genes that share expression patterns with ARMC1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARMC1 Gene

Orthologs for ARMC1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ARMC1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ARMC1 34 35
  • 99.88 (n)
(Monodelphis domestica)
Mammalia ARMC1 35
  • 96 (a)
(Ornithorhynchus anatinus)
Mammalia ARMC1 35
  • 95 (a)
(Canis familiaris)
Mammalia ARMC1 34 35
  • 92.91 (n)
(Rattus norvegicus)
Mammalia Armc1 34
  • 91.47 (n)
(Bos Taurus)
Mammalia ARMC1 34 35
  • 90.9 (n)
(Mus musculus)
Mammalia Armc1 34 16 35
  • 90.07 (n)
(Gallus gallus)
Aves ARMC1 34 35
  • 83.51 (n)
(Anolis carolinensis)
Reptilia ARMC1 35
  • 92 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia armc1 34
  • 77.45 (n)
Str.20051 34
African clawed frog
(Xenopus laevis)
Amphibia LOC398519 34
(Danio rerio)
Actinopterygii armc1 34 35
  • 71.29 (n)
sbcb398 34
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8431 35
  • 34 (a)
Species where no ortholog for ARMC1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ARMC1 Gene

Gene Tree for ARMC1 (if available)
Gene Tree for ARMC1 (if available)

Paralogs for ARMC1 Gene Pseudogenes for ARMC1 Gene

genes like me logo Genes that share paralogs with ARMC1: view

No data available for Paralogs for ARMC1 Gene

Variants for ARMC1 Gene

Sequence variations from dbSNP and Humsavar for ARMC1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000137589 -- 65,616,252(+) CTCAG(C/T)CTGCC intron-variant
rs1000170801 -- 65,616,361(+) AGCTC(C/T)TAACC intron-variant
rs1000184683 -- 65,602,110(+) GCAGG(G/T)GTGGT downstream-variant-500B
rs1000222022 -- 65,627,468(+) AGGCT(A/G)CTGAG intron-variant
rs1000378783 -- 65,623,901(+) CAAGC(A/G)ATTCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARMC1 Gene

Variant ID Type Subtype PubMed ID
esv2761434 CNV gain 21179565
nsv398101 CNV deletion 16902084
nsv398351 CNV deletion 16902084

Variation tolerance for ARMC1 Gene

Residual Variation Intolerance Score: 53.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.68; 14.48% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ARMC1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ARMC1 Gene

Disorders for ARMC1 Gene

Relevant External Links for ARMC1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ARMC1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARMC1 Gene

Publications for ARMC1 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  2. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 46 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64

Products for ARMC1 Gene

Sources for ARMC1 Gene

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