ARL9 Gene
protein-coding GIFtS: 39
GCID: GC04P057371
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ADP-ribosylation factor-like 9
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Aliases
for ARL9 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| ADP-Ribosylation Factor-Like 91 2 | | ADP-Ribosylation Factor-Like Protein 92 |
Export aliases for ARL9 gene to outside databasesPrevious GC identifers: GC00U914119 GC04P057287 GC04P057212 GC04P057066 GC04P053325 |
Summaries
for ARL9 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for ARL9:
ARL9 is a member of the small GTPase protein family with a high degree of similarity to ARF (MIM 103180) proteins ofthe RAS superfamily.(supplied by OMIM, Nov 2008)
|
Genomic Views
for ARL9 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000004.11 NC_018915.1 NT_022853.15
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ARL9 gene promoter:
E2F-3a E2F-4 E2F-5 AP-4 E2F-2 RORalpha2 YY1 E2F-1 E2F POU2F1a
Other transcription factors
Search SABiosciences Chromatin IP Primers for ARL9
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ARL9 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 4q12 Ensembl cytogenetic band: 4q12 HGNC cytogenetic band: 4q12ARL9 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 4 GeneLoc Exon Structure GeneLoc location for GC04P057371: view genomic region
(about GC identifiers)
Start:
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57,371,375 bp from pter |
End:
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57,390,058 bp from pter |
Size:
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18,684 bases |
Orientation:
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plus strand |
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Proteins
for ARL9 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: ARL9_HUMAN, Q6T311 (See
protein sequence)Recommended Name: ADP-ribosylation factor-like protein 9 Size: 187 amino acids; 20755 DaExplore the universe of human proteins at neXtProt for ARL9: NX_Q6T311
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q6T311
ARL9 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_996802.1
ENSEMBL proteins: ENSP00000353210
Human Recombinant Protein Products:
Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005622 | intracellular |
IEA | -- |
ARL9 for ontologies About GeneDecksing
ARL9 Antibody Products:
Assay Products for ARL9: |
Protein
Domains /
Families
for ARL9 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ARL9 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q6T311ProtoNet protein and cluster: Q6T311 UniProtKB/Swiss-Prot: ARL9_HUMAN, Q6T311Similarity: Belongs to the small GTPase superfamily. Arf family |
Function
for ARL9 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: ARL9 (NM_206919) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ARL9 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ARL9 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ARL9 |
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005525 | GTP binding |
IEA | -- |
ARL9 for ontologies About GeneDecksing
|
Pathways & Interactions
for ARL9 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ARL9
Gene Ontology (GO): 1 biological process term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
IEA | -- |
ARL9 for ontologies About GeneDecksing
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Drugs & Compounds
for ARL9 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for ARL9
Search CenterWatch for drugs/clinical trials and news about ARL9
|
Transcripts
for ARL9 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for ARL9 gene: NM_206919.1 Unigene Cluster for ARL9: ADP-ribosylation factor-like 9 Hs.444449 [show with all ESTs]Unigene Representative Sequence: AY4390031 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000360096(uc003hby.1)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: ARL9 (NM_206919) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ARL9 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ARL9 |
Additional cDNA sequence: AY439003.1 2 DOTS entries: DT.100734466 DT.92068835 24/32 AceView cDNA sequences (see all 32): AA425698 NM_206919 BM854066 AY439003 BE463997 BX103554 BU101774 AA234274 AW594395 BF059732 AA778704 AI656595 N78781 CB123729 AI150007 AW207074 AA927415 AI992069 AA620971 BE552080 AA428548 AI377529 AI208738 BM930307
GeneLoc Exon Structure
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Expression
for ARL9 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| ARL9 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --
About this image
See ARL9 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for ARL9
SOURCE GeneReport for Unigene cluster: Hs.444449
SABiosciences Custom PCR Arrays for ARL9
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ARL9
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ARL9 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ARL9 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ARL9 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ARL9 |
Orthologs
for ARL9 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of animals.
Orthologs for ARL9 gene from 5/16 species (see all 16) About this table
ENSEMBL Gene Tree for ARL9 (if available)
TreeFam Gene Tree for ARL9 (if available) |
Paralogs
for ARL9 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for ARL9 gene
- ARL4A2 ARL112 ARF42 ARF52 ARF12 ARL4D2 ARF32 ARL142
- ARF62 ARL17B2 ARL4C2 TRIM232 ARL102
18/19 SIMAP similar genes for ARL9 using alignment to 1 protein entry: ARL9_HUMAN(see all similar genes):ARL2 ARL3 ARL5B ARL10 ARF3 ARF1
ARL14 ARF6 ARF5 ARL13B ARF4 ARL1
ARL5A ARL4C ARL7 ARL4D ARL6 ARL8A
ARL9 for paralogs About GeneDecksing
|
Genomic Variants
for ARL9 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
| | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ARL9 |
|
Disorders
/ Diseases
for ARL9 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
ARL9 for disorders About GeneDecksing
OMIM gene information: 612405
OMIM disorders: --
1  disease for ARL9: About MalaCardsprostatitis
Export disorders for ARL9 gene to outside databases
|
Publications
for ARL9 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed article for ARL9 gene integrated from 9 sources:
(articles sorted by number of sources associating them with ARL9) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Rasl11a, member of a novel small monomeric GTPase gene family, is differentially expressed in prostate tumors. (PubMed id 15033445)1, 2 Louro R.... Reis E.M. (2004)
|
External Searches for ARL9 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing ARL9 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ARL9 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ARL9 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for ARL9 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for ARL9 gene:
Search GeneIP for patents involving ARL9
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ARL9 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
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| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for ARL9 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ARL9 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ARL9 | | | OriGene Protein Over-expression Lysate for ARL9 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for ARL9 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ARL9 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | OriGene Purified Protein for ARL9 | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for ARL9 | | OriGene Custom Protein Services for ARL9 | | | OriGene Custom Immunoassay Development | | |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ARL9 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ARL9 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ARL9 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ARL9 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ARL9 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ARL9 |
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| |  |  |  |  | | | | | | Recombinant Protein for ARL9 |
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 | | | ARL9 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ARL9 |
|  |  |  | | | | Search ThermoFisher Antibodies for ARL9 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ARL9 |
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