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Aliases for ARHGEF7-IT1 Gene

Subcategory (RNA class) for ARHGEF7-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARHGEF7-IT1 Gene

  • ARHGEF7 Intronic Transcript 1 2 3 5
  • ARHGEF7 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ARHGEF7-IT1 Gene

Previous GeneCards Identifiers for ARHGEF7-IT1 Gene

  • GC00U933819
  • GC13P111775

Summaries for ARHGEF7-IT1 Gene

GeneCards Summary for ARHGEF7-IT1 Gene

ARHGEF7-IT1 (ARHGEF7 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF7-IT1 Gene

Genomics for ARHGEF7-IT1 Gene

Regulatory Elements for ARHGEF7-IT1 Gene

Enhancers for ARHGEF7-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G111120 0.9 ENCODE dbSUPER 0.7 -0.4 -400 4.3 CTCF ZSCAN4 HLF MNT ZFHX2 POLR2A EGR1 SMARCA4 SCRT2 EGR2 ARHGEF7-AS2 LINC00431 ARHGEF7-IT1
GH13G111113 1.1 ENCODE dbSUPER 0.4 -6.4 -6428 4.5 CTCF MXI1 ARNT TAF1 ZNF76 FEZF1 RBBP5 RAD21 YY1 ZNF664 ARHGEF7-AS2 LINC00368 ARHGEF7-IT1
GH13G111129 0.7 dbSUPER 0.4 +8.3 8297 3.4 MTA2 JUNB EP300 JUND ARID3A CBX5 IKZF1 ETV6 RELB WT1 GC13M111134 PIR35673 ARHGEF7-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARHGEF7-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ARHGEF7-IT1 Gene

Chromosome:
13
Start:
111,122,652 bp from pter
End:
111,144,264 bp from pter
Size:
21,613 bases
Orientation:
Plus strand

Genomic View for ARHGEF7-IT1 Gene

Genes around ARHGEF7-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF7-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF7-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARHGEF7-IT1 Gene

Proteins for ARHGEF7-IT1 Gene

Post-translational modifications for ARHGEF7-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF7-IT1 Gene

Domains & Families for ARHGEF7-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF7-IT1 Gene

Function for ARHGEF7-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF7-IT1 Gene

Localization for ARHGEF7-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARHGEF7-IT1 Gene

Pathways & Interactions for ARHGEF7-IT1 Gene

SuperPathways for ARHGEF7-IT1 Gene

No Data Available

Interacting Proteins for ARHGEF7-IT1 Gene

Gene Ontology (GO) - Biological Process for ARHGEF7-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF7-IT1 Gene

Drugs & Compounds for ARHGEF7-IT1 Gene

No Compound Related Data Available

Transcripts for ARHGEF7-IT1 Gene

mRNA/cDNA for ARHGEF7-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF7-IT1 Gene

No ASD Table

Relevant External Links for ARHGEF7-IT1 Gene

GeneLoc Exon Structure for
ARHGEF7-IT1
ECgene alternative splicing isoforms for
ARHGEF7-IT1

Expression for ARHGEF7-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF7-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF7-IT1 Gene

This gene is overexpressed in Testis (x26.5).
genes like me logo Genes that share expression patterns with ARHGEF7-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF7-IT1 Gene

Orthologs for ARHGEF7-IT1 Gene

Evolution for ARHGEF7-IT1 Gene

ENSEMBL:
Gene Tree for ARHGEF7-IT1 (if available)
TreeFam:
Gene Tree for ARHGEF7-IT1 (if available)

No data available for Orthologs for ARHGEF7-IT1 Gene

Paralogs for ARHGEF7-IT1 Gene

No data available for Paralogs for ARHGEF7-IT1 Gene

Variants for ARHGEF7-IT1 Gene

Relevant External Links for ARHGEF7-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF7-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF7-IT1 Gene

Disorders for ARHGEF7-IT1 Gene

Relevant External Links for ARHGEF7-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARHGEF7-IT1

No disorders were found for ARHGEF7-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF7-IT1 Gene

Publications for ARHGEF7-IT1 Gene

No publications were found for ARHGEF7-IT1 Gene.

Products for ARHGEF7-IT1 Gene

Sources for ARHGEF7-IT1 Gene

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